RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 ATF3P18847 181 aa4.32□□□□□ -1.72
CCDC30-203ENST00000428554 EIF1AXP47813 144 aaKnown RBP4.32□□□□□ -1.72
CCDC30-203ENST00000428554 SARSP49591 514 aaKnown RBP4.32□□□□□ -1.72
CCDC30-203ENST00000428554 ST13P50502 369 aaKnown RBP4.32□□□□□ -1.72
CCDC30-203ENST00000428554 TERF1P54274 439 aa4.32□□□□□ -1.72
CCDC30-203ENST00000428554 LRRC41Q15345 812 aa4.32□□□□□ -1.72
CCDC30-203ENST00000428554 DALRD3Q5D0E6 543 aaKnown RBP4.32□□□□□ -1.72
CCDC30-203ENST00000428554 IFNL2Q8IZJ0 200 aa4.32□□□□□ -1.72
CCDC30-203ENST00000428554 PPHLN1Q8NEY8 458 aaKnown RBP4.32□□□□□ -1.72
CCDC30-203ENST00000428554 MYCBPQ99417 103 aaPredicted RBP4.32□□□□□ -1.72
CCDC30-203ENST00000428554 GRIP2Q9C0E4 1043 aa4.32□□□□□ -1.72
CCDC30-203ENST00000428554 FZD6O60353 706 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 RASGRP1O95267 797 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 CT47B1P0C2W7 299 aaPredicted RBP4.31□□□□□ -1.72
CCDC30-203ENST00000428554 HIRAP54198 1017 aaPredicted RBP4.31□□□□□ -1.72
CCDC30-203ENST00000428554 TMEM214Q6NUQ4 689 aaKnown RBP4.31□□□□□ -1.72
CCDC30-203ENST00000428554 ERMP1Q7Z2K6 904 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 ANKRD13BQ86YJ7 626 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 ETFBKMTQ8IXQ9 262 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 HERPUD2Q9BSE4 406 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 SELENOOQ9BVL4 669 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 PHACTR1Q9C0D0 580 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 PPCSQ9HAB8 311 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 STIM2Q9P246 746 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 CAPN5O15484 640 aaPredicted RBP4.31□□□□□ -1.72
CCDC30-203ENST00000428554 TRIM27P14373 513 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 PDE6BP35913 854 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 TSPAN7P41732 249 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 MAPK8P45983 427 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 PSMC1P62191 440 aaKnown RBP4.31□□□□□ -1.72
CCDC30-203ENST00000428554 DGKZQ13574 1117 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 C4orf17Q53FE4 359 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 TSHZ3Q63HK5 1081 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 PODNQ7Z5L7 613 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 DGKHQ86XP1 1220 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 LINC00528Q8N1L1 170 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 NBPF15Q8N660 670 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 MYO19Q96H55 970 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 CFHR5Q9BXR6 569 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 WASHC2AQ641Q2 1341 aa4.31□□□□□ -1.72
CCDC30-203ENST00000428554 SPINT1O43278 529 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 F2P00734 622 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 AVPP01185 164 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 PSMA3P25788 255 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 PHKA2P46019 1235 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 PLA2G4AP47712 749 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 GEMIN4P57678 1058 aaKnown RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 TAF11Q15544 211 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 DDX42Q86XP3 938 aaKnown RBP eCLIP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 THNSL2Q86YJ6 484 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 EGFL6Q8IUX8 553 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 CPXCR1Q8N123 301 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 VPS37AQ8NEZ2 397 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 RHBDD1Q8TEB9 315 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 NIFKQ9BYG3 293 aaKnown RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 RABGAP1Q9Y3P9 1069 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 ATICP31939 592 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 UVSSAQ2YD98 709 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 TM4SF20Q53R12 229 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 SLC27A3Q5K4L6 730 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 WDR45BQ5MNZ6 344 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 C6orf118Q5T5N4 469 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 SUGP1Q8IWZ8 645 aaKnown RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 LMNTD2Q8IXW0 634 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 TSEN34Q9BSV6 310 aaKnown RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 FAM126AQ9BYI3 521 aaPredicted RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 TRIM55Q9BYV6 548 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 CDH19Q9H159 772 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 POLMQ9NP87 494 aaPredicted RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 BCS1LQ9Y276 419 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 CHMP3Q9Y3E7 222 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 ADGRL1O94910 1474 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 CHL1O00533 1208 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 RFPL1O75677 317 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 IGHDP01880 384 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 RRM1P23921 792 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 MZF1P28698 734 aaPredicted RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 ETFBP38117 255 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 STAT3P40763 770 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 RNF144AP50876 292 aaPredicted RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 GPSM2P81274 684 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 DCTN1Q14203 1278 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 CTC1Q2NKJ3 1217 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 C2orf27AQ580R0 203 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 C16orf54Q6UWD8 224 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 RELL1Q8IUW5 271 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 C7orf43Q8WVR3 580 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 SKA1Q96BD8 255 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 CDHR1Q96JP9 859 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 YTHDC1Q96MU7 727 aaKnown RBP4.3□□□□□ -1.72
CCDC30-203ENST00000428554 DNAJC7Q99615 494 aa4.3□□□□□ -1.72
CCDC30-203ENST00000428554 GPR182O15218 404 aa4.29□□□□□ -1.72
CCDC30-203ENST00000428554 SSBP05455 408 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC30-203ENST00000428554 BMP1P13497 986 aa4.29□□□□□ -1.72
CCDC30-203ENST00000428554 FLT3P36888 993 aa4.29□□□□□ -1.72
CCDC30-203ENST00000428554 TDO2P48775 406 aa4.29□□□□□ -1.72
CCDC30-203ENST00000428554 RTN1Q16799 776 aa4.29□□□□□ -1.72
CCDC30-203ENST00000428554 FAM102BQ5T8I3 360 aa4.29□□□□□ -1.72
CCDC30-203ENST00000428554 PPP4R3AQ6IN85 833 aa4.29□□□□□ -1.72
CCDC30-203ENST00000428554 MZT2AQ6P582 158 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms