RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 SUPT20HL1Q3ZLR7 823 aa20.46■□□□□ 0.87
VRK2-204ENST00000428021 LDLRAD1Q5T700 205 aa20.46■□□□□ 0.87
VRK2-204ENST00000428021 CYP2E1P05181 493 aaPredicted RBP20.45■□□□□ 0.86
VRK2-204ENST00000428021 SLC10A3P09131 477 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 ZAP70P43403 619 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 TNNI2P48788 182 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 MAP3K11Q16584 847 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 ARMC9Q7Z3E5 817 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 FAM83AQ86UY5 434 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 CLASRPQ8N2M8 674 aaKnown RBP20.45■□□□□ 0.86
VRK2-204ENST00000428021 CCDC102AQ96A19 550 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 NSUN4Q96CB9 384 aaKnown RBP20.45■□□□□ 0.86
VRK2-204ENST00000428021 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
VRK2-204ENST00000428021 ANGEL1Q9UNK9 670 aaKnown RBP20.45■□□□□ 0.86
VRK2-204ENST00000428021 MYO5AQ9Y4I1 1855 aaKnown RBP20.45■□□□□ 0.86
VRK2-204ENST00000428021 NOGQ13253 232 aa20.44■□□□□ 0.86
VRK2-204ENST00000428021 RASAL3Q86YV0 1011 aa20.44■□□□□ 0.86
VRK2-204ENST00000428021 USP40Q9NVE5 1235 aa20.44■□□□□ 0.86
VRK2-204ENST00000428021 MROH7-TTC4A0A0A0MT08 1334 aa20.44■□□□□ 0.86
VRK2-204ENST00000428021 PPP1R12BO60237 982 aaPredicted RBP20.43■□□□□ 0.86
VRK2-204ENST00000428021 USP2O75604 605 aaPredicted RBP20.43■□□□□ 0.86
VRK2-204ENST00000428021 MAP2K1Q02750 393 aaPredicted RBP20.43■□□□□ 0.86
VRK2-204ENST00000428021 NFIAQ12857 509 aa20.43■□□□□ 0.86
VRK2-204ENST00000428021 SLF2Q8IX21 1173 aa20.43■□□□□ 0.86
VRK2-204ENST00000428021 DCTPP1Q9H773 170 aa20.43■□□□□ 0.86
VRK2-204ENST00000428021 PIH1D3Q9NQM4 214 aaKnown RBP20.43■□□□□ 0.86
VRK2-204ENST00000428021 RAI14Q9P0K7 980 aa20.43■□□□□ 0.86
VRK2-204ENST00000428021 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
VRK2-204ENST00000428021 GPR75-ASB3A0A0A6YYF3 556 aa20.42■□□□□ 0.86
VRK2-204ENST00000428021 FAM198AQ9UFP1 575 aa20.42■□□□□ 0.86
VRK2-204ENST00000428021 FOXN1O15353 648 aa20.41■□□□□ 0.86
VRK2-204ENST00000428021 IFIT2P09913 472 aaKnown RBP20.41■□□□□ 0.86
VRK2-204ENST00000428021 BTDP43251 543 aa20.41■□□□□ 0.86
VRK2-204ENST00000428021 FAM151AQ8WW52 585 aa20.41■□□□□ 0.86
VRK2-204ENST00000428021 NDUFB9Q9Y6M9 179 aa20.41■□□□□ 0.86
VRK2-204ENST00000428021 SMARCA5O60264 1052 aaPredicted RBP20.4■□□□□ 0.86
VRK2-204ENST00000428021 LDHCP07864 332 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 RHBDL3P58872 404 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 GSTO1P78417 241 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 KIF23Q02241 960 aaPredicted RBP20.4■□□□□ 0.86
VRK2-204ENST00000428021 TCP10Q12799 353 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 RFX7Q2KHR2 1363 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 ZFPM1Q8IX07 1006 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 RPAP1Q9BWH6 1393 aaPredicted RBP20.4■□□□□ 0.86
VRK2-204ENST00000428021 IDI2Q9BXS1 227 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 LRRCC1Q9C099 1032 aa20.4■□□□□ 0.86
VRK2-204ENST00000428021 WDHD1O75717 1129 aaPredicted RBP20.39■□□□□ 0.85
VRK2-204ENST00000428021 CLMNQ96JQ2 1002 aa20.39■□□□□ 0.85
VRK2-204ENST00000428021 BCL11AQ9H165 835 aa20.39■□□□□ 0.85
VRK2-204ENST00000428021 ANTXR1Q9H6X2 564 aa20.39■□□□□ 0.85
VRK2-204ENST00000428021 MAST2Q6P0Q8 1798 aa20.39■□□□□ 0.85
VRK2-204ENST00000428021 UNCXA6NJT0 531 aa20.38■□□□□ 0.85
VRK2-204ENST00000428021 IREB2P48200 963 aaKnown RBP20.38■□□□□ 0.85
VRK2-204ENST00000428021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.38■□□□□ 0.85
VRK2-204ENST00000428021 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
VRK2-204ENST00000428021 DDX4Q9NQI0 724 aaKnown RBP20.38■□□□□ 0.85
VRK2-204ENST00000428021 SUPT16HQ9Y5B9 1047 aaKnown RBP20.38■□□□□ 0.85
VRK2-204ENST00000428021 OTOFQ9HC10 1997 aa20.37■□□□□ 0.85
VRK2-204ENST00000428021 DOCK2Q92608 1830 aa20.37■□□□□ 0.85
VRK2-204ENST00000428021 IGSF3O75054 1194 aa20.37■□□□□ 0.85
VRK2-204ENST00000428021 RGS3P49796 1198 aa20.37■□□□□ 0.85
VRK2-204ENST00000428021 NAA16Q6N069 864 aaPredicted RBP20.37■□□□□ 0.85
VRK2-204ENST00000428021 ADGRA1Q86SQ6 560 aa20.37■□□□□ 0.85
VRK2-204ENST00000428021 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
VRK2-204ENST00000428021 ENTPD3O75355 529 aa20.36■□□□□ 0.85
VRK2-204ENST00000428021 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
VRK2-204ENST00000428021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.36■□□□□ 0.85
VRK2-204ENST00000428021 SLC10A4Q96EP9 437 aa20.36■□□□□ 0.85
VRK2-204ENST00000428021 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
VRK2-204ENST00000428021 IDH1O75874 414 aaKnown RBP20.35■□□□□ 0.85
VRK2-204ENST00000428021 MAP4K4O95819 1239 aaPredicted RBP20.35■□□□□ 0.85
VRK2-204ENST00000428021 ATP5JP18859 108 aa20.35■□□□□ 0.85
VRK2-204ENST00000428021 CTCFP49711 727 aaPredicted RBP20.35■□□□□ 0.85
VRK2-204ENST00000428021 SPRYD7Q5W111 196 aa20.35■□□□□ 0.85
VRK2-204ENST00000428021 SH3BP5LQ7L8J4 393 aa20.35■□□□□ 0.85
VRK2-204ENST00000428021 ANKRD13AQ8IZ07 590 aa20.35■□□□□ 0.85
VRK2-204ENST00000428021 NPM3O75607 178 aaKnown RBP20.34■□□□□ 0.85
VRK2-204ENST00000428021 HSPA8P11142 646 aaKnown RBP20.34■□□□□ 0.85
VRK2-204ENST00000428021 PPP4CP60510 307 aa20.34■□□□□ 0.85
VRK2-204ENST00000428021 MAP3K9P80192 1104 aa20.34■□□□□ 0.85
VRK2-204ENST00000428021 MKRN3Q13064 507 aaKnown RBP20.34■□□□□ 0.85
VRK2-204ENST00000428021 MIGA2Q7L4E1 593 aa20.34■□□□□ 0.85
VRK2-204ENST00000428021 BEGAINQ9BUH8 593 aa20.34■□□□□ 0.85
VRK2-204ENST00000428021 ATRNL1Q5VV63 1379 aa20.34■□□□□ 0.85
VRK2-204ENST00000428021 GJA5P36382 358 aa20.33■□□□□ 0.85
VRK2-204ENST00000428021 AAMPQ13685 434 aa20.33■□□□□ 0.85
VRK2-204ENST00000428021 EXOC6Q8TAG9 804 aa20.33■□□□□ 0.85
VRK2-204ENST00000428021 SH3RF3Q8TEJ3 882 aaPredicted RBP20.33■□□□□ 0.85
VRK2-204ENST00000428021 HOOK2Q96ED9 719 aa20.33■□□□□ 0.85
VRK2-204ENST00000428021 EDC3Q96F86 508 aaKnown RBP20.33■□□□□ 0.85
VRK2-204ENST00000428021 WNK4Q96J92 1243 aa20.33■□□□□ 0.85
VRK2-204ENST00000428021 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.85
VRK2-204ENST00000428021 AATFQ9NY61 560 aaKnown RBP eCLIP20.33■□□□□ 0.85
VRK2-204ENST00000428021 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.33■□□□□ 0.85
VRK2-204ENST00000428021 DDTLA6NHG4 134 aaPredicted RBP20.32■□□□□ 0.84
VRK2-204ENST00000428021 CYP7A1P22680 504 aa20.32■□□□□ 0.84
VRK2-204ENST00000428021 LBX1P52954 281 aa20.32■□□□□ 0.84
VRK2-204ENST00000428021 PICALMQ13492 652 aa20.32■□□□□ 0.84
VRK2-204ENST00000428021 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
VRK2-204ENST00000428021 VGLL4Q14135 290 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms