RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 TNNI2P48788 182 aa23.62■■□□□ 1.37
COL9A2-204ENST00000427563 OS9Q13438 667 aaPredicted RBP23.62■■□□□ 1.37
COL9A2-204ENST00000427563 TBC1D9Q6ZT07 1266 aa23.62■■□□□ 1.37
COL9A2-204ENST00000427563 SPATA5Q8NB90 893 aa23.62■■□□□ 1.37
COL9A2-204ENST00000427563 SAGE1Q9NXZ1 904 aa23.62■■□□□ 1.37
COL9A2-204ENST00000427563 ABCF2Q9UG63 623 aa23.62■■□□□ 1.37
COL9A2-204ENST00000427563 EXOC6BQ9Y2D4 811 aa23.62■■□□□ 1.37
COL9A2-204ENST00000427563 RFX7Q2KHR2 1363 aa23.62■■□□□ 1.37
COL9A2-204ENST00000427563 TM4SF4P48230 202 aa23.61■■□□□ 1.37
COL9A2-204ENST00000427563 EAF2Q96CJ1 260 aaPredicted RBP23.61■■□□□ 1.37
COL9A2-204ENST00000427563 WNK4Q96J92 1243 aa23.61■■□□□ 1.37
COL9A2-204ENST00000427563 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.61■■□□□ 1.37
COL9A2-204ENST00000427563 FAM198AQ9UFP1 575 aa23.61■■□□□ 1.37
COL9A2-204ENST00000427563 DBNLQ9UJU6 430 aaKnown RBP23.61■■□□□ 1.37
COL9A2-204ENST00000427563 DDX19BQ9UMR2 479 aa23.61■■□□□ 1.37
COL9A2-204ENST00000427563 RPAP1Q9BWH6 1393 aaPredicted RBP23.61■■□□□ 1.37
COL9A2-204ENST00000427563 IREB2P48200 963 aaKnown RBP23.6■■□□□ 1.37
COL9A2-204ENST00000427563 GORABQ5T7V8 394 aa23.6■■□□□ 1.37
COL9A2-204ENST00000427563 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.6■■□□□ 1.37
COL9A2-204ENST00000427563 ZGPATQ8N5A5 531 aaKnown RBP23.6■■□□□ 1.37
COL9A2-204ENST00000427563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.6■■□□□ 1.372e-6■■■□□ 15.6
COL9A2-204ENST00000427563 SLC10A4Q96EP9 437 aa23.6■■□□□ 1.37
COL9A2-204ENST00000427563 FAM163AQ96GL9 167 aaPredicted RBP23.6■■□□□ 1.37
COL9A2-204ENST00000427563 TMOD2Q9NZR1 351 aa23.6■■□□□ 1.37
COL9A2-204ENST00000427563 MECOMQ03112 1051 aa23.59■■□□□ 1.37
COL9A2-204ENST00000427563 ZFPM1Q8IX07 1006 aa23.59■■□□□ 1.37
COL9A2-204ENST00000427563 REM2Q8IYK8 340 aaPredicted RBP23.59■■□□□ 1.37
COL9A2-204ENST00000427563 CCDC8Q9H0W5 538 aaPredicted RBP23.59■■□□□ 1.37
COL9A2-204ENST00000427563 USP40Q9NVE5 1235 aa23.59■■□□□ 1.37
COL9A2-204ENST00000427563 AK9Q5TCS8 1911 aa23.59■■□□□ 1.37
COL9A2-204ENST00000427563 MAST2Q6P0Q8 1798 aa23.58■■□□□ 1.37
COL9A2-204ENST00000427563 UNCXA6NJT0 531 aa23.58■■□□□ 1.37
COL9A2-204ENST00000427563 DZIP1Q86YF9 867 aaKnown RBP23.58■■□□□ 1.37
COL9A2-204ENST00000427563 ANKRD13AQ8IZ07 590 aa23.58■■□□□ 1.37
COL9A2-204ENST00000427563 FAM151AQ8WW52 585 aa23.58■■□□□ 1.37
COL9A2-204ENST00000427563 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
COL9A2-204ENST00000427563 SNRKQ9NRH2 765 aa23.58■■□□□ 1.37
COL9A2-204ENST00000427563 DOCK2Q92608 1830 aa23.57■■□□□ 1.36
COL9A2-204ENST00000427563 UQCRFS1P1P0C7P4 283 aa23.57■■□□□ 1.36
COL9A2-204ENST00000427563 TCP10Q12799 353 aa23.57■■□□□ 1.36
COL9A2-204ENST00000427563 PDE3AQ14432 1141 aa23.57■■□□□ 1.36
COL9A2-204ENST00000427563 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
COL9A2-204ENST00000427563 NSUN4Q96CB9 384 aaKnown RBP23.57■■□□□ 1.36
COL9A2-204ENST00000427563 ELP3Q9H9T3 547 aa23.57■■□□□ 1.36
COL9A2-204ENST00000427563 MROH7-TTC4A0A0A0MT08 1334 aa23.57■■□□□ 1.36
COL9A2-204ENST00000427563 VGLL4Q14135 290 aa23.56■■□□□ 1.36
COL9A2-204ENST00000427563 SPTY2D1Q68D10 685 aaPredicted RBP23.56■■□□□ 1.36
COL9A2-204ENST00000427563 DDX4Q9NQI0 724 aaKnown RBP23.56■■□□□ 1.36
COL9A2-204ENST00000427563 ATRNL1Q5VV63 1379 aa23.55■■□□□ 1.36
COL9A2-204ENST00000427563 WDHD1O75717 1129 aaPredicted RBP23.55■■□□□ 1.36
COL9A2-204ENST00000427563 ZBTB48P10074 688 aaPredicted RBP23.55■■□□□ 1.36
COL9A2-204ENST00000427563 BTDP43251 543 aa23.55■■□□□ 1.36
COL9A2-204ENST00000427563 RHBDL3P58872 404 aa23.55■■□□□ 1.36
COL9A2-204ENST00000427563 TTC39AQ5SRH9 613 aa23.55■■□□□ 1.36
COL9A2-204ENST00000427563 SH3BP5LQ7L8J4 393 aa23.55■■□□□ 1.36
COL9A2-204ENST00000427563 RPAP2Q8IXW5 612 aaPredicted RBP23.55■■□□□ 1.36
COL9A2-204ENST00000427563 ZNF512BQ96KM6 892 aaPredicted RBP23.55■■□□□ 1.36
COL9A2-204ENST00000427563 IDI2Q9BXS1 227 aa23.55■■□□□ 1.36
COL9A2-204ENST00000427563 R3HDMLQ9H3Y0 253 aa23.55■■□□□ 1.36
COL9A2-204ENST00000427563 GPR75-ASB3A0A0A6YYF3 556 aa23.54■■□□□ 1.36
COL9A2-204ENST00000427563 TBC1D8O95759 1140 aa23.54■■□□□ 1.36
COL9A2-204ENST00000427563 CYP2E1P05181 493 aaPredicted RBP23.54■■□□□ 1.36
COL9A2-204ENST00000427563 MAP3K9P80192 1104 aa23.54■■□□□ 1.36
COL9A2-204ENST00000427563 MIGA2Q7L4E1 593 aa23.54■■□□□ 1.36
COL9A2-204ENST00000427563 SNCAIPQ9Y6H5 919 aa23.54■■□□□ 1.36
COL9A2-204ENST00000427563 CDK5RAP2Q96SN8 1893 aa23.53■■□□□ 1.36
COL9A2-204ENST00000427563 IGF2BP3O00425 579 aaKnown RBP eCLIP23.53■■□□□ 1.36
COL9A2-204ENST00000427563 ZAP70P43403 619 aa23.53■■□□□ 1.36
COL9A2-204ENST00000427563 RGS3P49796 1198 aa23.53■■□□□ 1.36
COL9A2-204ENST00000427563 CCDC158Q5M9N0 1113 aa23.53■■□□□ 1.36
COL9A2-204ENST00000427563 RHPN1Q8TCX5 695 aa23.53■■□□□ 1.36
COL9A2-204ENST00000427563 OPTNQ96CV9 577 aa23.53■■□□□ 1.36
COL9A2-204ENST00000427563 IL1RAPL2Q9NP60 686 aa23.53■■□□□ 1.36
COL9A2-204ENST00000427563 CAPN15O75808 1086 aa23.52■■□□□ 1.36
COL9A2-204ENST00000427563 SLURP2P0DP57 97 aa23.52■■□□□ 1.36
COL9A2-204ENST00000427563 SREBF2Q12772 1141 aa23.52■■□□□ 1.36
COL9A2-204ENST00000427563 ZKSCAN4Q969J2 545 aaPredicted RBP23.52■■□□□ 1.36
COL9A2-204ENST00000427563 PIH1D3Q9NQM4 214 aaKnown RBP23.52■■□□□ 1.36
COL9A2-204ENST00000427563 MANSC4A6NHS7 340 aaPredicted RBP23.51■■□□□ 1.35
COL9A2-204ENST00000427563 IFNL1Q8IU54 200 aa23.51■■□□□ 1.35
COL9A2-204ENST00000427563 MS4A4AQ96JQ5 239 aa23.51■■□□□ 1.35
COL9A2-204ENST00000427563 WRNIP1Q96S55 665 aa23.51■■□□□ 1.35
COL9A2-204ENST00000427563 PTPN18Q99952 460 aa23.51■■□□□ 1.35
COL9A2-204ENST00000427563 RAI14Q9P0K7 980 aa23.51■■□□□ 1.35
COL9A2-204ENST00000427563 NDUFB9Q9Y6M9 179 aa23.51■■□□□ 1.35
COL9A2-204ENST00000427563 TESPA1A2RU30 521 aaPredicted RBP23.5■■□□□ 1.35
COL9A2-204ENST00000427563 ENTPD3O75355 529 aa23.5■■□□□ 1.35
COL9A2-204ENST00000427563 INPP5BP32019 993 aa23.5■■□□□ 1.35
COL9A2-204ENST00000427563 AACSQ86V21 672 aa23.5■■□□□ 1.35
COL9A2-204ENST00000427563 ERC1Q8IUD2 1116 aa23.5■■□□□ 1.35
COL9A2-204ENST00000427563 SLF2Q8IX21 1173 aa23.5■■□□□ 1.35
COL9A2-204ENST00000427563 CFHR5Q9BXR6 569 aa23.5■■□□□ 1.35
COL9A2-204ENST00000427563 ZNF112Q9UJU3 913 aa23.5■■□□□ 1.35
COL9A2-204ENST00000427563 FOCADQ5VW36 1801 aa23.49■■□□□ 1.35
COL9A2-204ENST00000427563 DDTLA6NHG4 134 aaPredicted RBP23.49■■□□□ 1.35
COL9A2-204ENST00000427563 ADGRA1Q86SQ6 560 aa23.49■■□□□ 1.35
COL9A2-204ENST00000427563 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.49■■□□□ 1.35
COL9A2-204ENST00000427563 ZNF341Q9BYN7 854 aa23.49■■□□□ 1.35
COL9A2-204ENST00000427563 LRP2BPQ9P2M1 347 aa23.49■■□□□ 1.35
COL9A2-204ENST00000427563 SIPA1L1O43166 1804 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms