RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 DYMQ7RTS9 669 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 FNBP1Q96RU3 617 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 GTF2IP78347 998 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 TEX14Q8IWB6 1497 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 CREB3L3Q68CJ9 461 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
SPG11-202ENST00000427534 PIK3C2GO75747 1445 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 RLBP1P12271 317 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 GEN1Q17RS7 908 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 DTHD1Q6ZMT9 781 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 NAA15Q9BXJ9 866 aaKnown RBP14.85□□□□□ -0.03
SPG11-202ENST00000427534 IGBP1P78318 339 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 LRMPQ12912 555 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 CCDC117Q8IWD4 279 aaPredicted RBP14.85□□□□□ -0.03
SPG11-202ENST00000427534 ZFYP08048 801 aaPredicted RBP14.84□□□□□ -0.03
SPG11-202ENST00000427534 NIM1KQ8IY84 436 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 A0A1B0GVL5 298 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 TRIM37O94972 964 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 C8orf34Q49A92 452 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 TRIM75PA6NK02 468 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 DAPK3O43293 454 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 PTPROQ16827 1216 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 CEP83Q9Y592 693 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
SPG11-202ENST00000427534 FAM160A1Q05DH4 1040 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 LRRC27Q9C0I9 530 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 ZSCAN16Q9H4T2 348 aaPredicted RBP14.84□□□□□ -0.03
SPG11-202ENST00000427534 ODF2LQ9ULJ1 636 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 TLDC2A0PJX2 215 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 TCIRG1Q13488 830 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 XAGE2Q96GT9 111 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 DNAI1Q9UI46 699 aa14.84□□□□□ -0.03
SPG11-202ENST00000427534 KIAA0556O60303 1618 aa14.83□□□□□ -0.03
SPG11-202ENST00000427534 A0A1W2PP64 1363 aa14.83□□□□□ -0.03
SPG11-202ENST00000427534 HSF2BPO75031 334 aa14.83□□□□□ -0.03
SPG11-202ENST00000427534 STAMQ92783 540 aa14.83□□□□□ -0.03
SPG11-202ENST00000427534 MAP3K5Q99683 1374 aa14.83□□□□□ -0.03
SPG11-202ENST00000427534 KANK3Q6NY19 840 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 CFAP58Q5T655 872 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 IPO4Q8TEX9 1081 aaKnown RBP14.83□□□□□ -0.04
SPG11-202ENST00000427534 PHKBQ93100 1093 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 PPP1R16BQ96T49 567 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 CEP85Q6P2H3 762 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 DCTPP1Q9H773 170 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 ARHGEF10LQ9HCE6 1279 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 PSMA7O14818 248 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 IRX3P78415 501 aaPredicted RBP14.83□□□□□ -0.04
SPG11-202ENST00000427534 NEK11Q8NG66 645 aa14.83□□□□□ -0.04
SPG11-202ENST00000427534 OTUD7AQ8TE49 926 aaPredicted RBP14.83□□□□□ -0.04
SPG11-202ENST00000427534 RTL9Q8NET4 1388 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 PPP1R7Q15435 360 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 DNAJC10Q8IXB1 793 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 NELFCDQ8IXH7 590 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 KCNK9Q9NPC2 374 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 V9GY48 417 aaPredicted RBP14.82□□□□□ -0.04
SPG11-202ENST00000427534 NEMFO60524 1076 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 RHOXF2BP0C7M4 288 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 MCM6Q14566 821 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 RHOXF2Q9BQY4 288 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 ABCC10Q5T3U5 1492 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 KIAA0825Q8IV33 1275 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 GBP3Q9H0R5 595 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.82□□□□□ -0.04
SPG11-202ENST00000427534 WDR62O43379 1518 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 ABCC1P33527 1531 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 PPP4R3BQ5MIZ7 849 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 FAM200AQ8TCP9 573 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 MRPS27Q92552 414 aaKnown RBP14.82□□□□□ -0.04
SPG11-202ENST00000427534 DCAF5Q96JK2 942 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 ATP6V0A2Q9Y487 856 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 ZFYVE9O95405 1425 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 SPTLC2O15270 562 aa14.82□□□□□ -0.04
SPG11-202ENST00000427534 CLRN2A0PK11 232 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 SYT1P21579 422 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 FAM169AQ9Y6X4 670 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 TRAF5O00463 557 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 UTP14CQ5TAP6 766 aaKnown RBP14.81□□□□□ -0.04
SPG11-202ENST00000427534 TESPA1A2RU30 521 aaPredicted RBP14.81□□□□□ -0.04
SPG11-202ENST00000427534 GSDMDP57764 484 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 TRPC3Q13507 836 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 CEP112Q8N8E3 955 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 DBNDD2Q9BQY9 259 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 VPS16Q9H269 839 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 ZBTB40Q9NUA8 1239 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 B4DLN1 442 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 MRPL12P52815 198 aaKnown RBP14.81□□□□□ -0.04
SPG11-202ENST00000427534 UVSSAQ2YD98 709 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 USP37Q86T82 979 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 APOL6Q9BWW8 343 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 DENND2AQ9ULE3 1009 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 GNAQP50148 359 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 TMTC2Q8N394 836 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 PFDN4Q9NQP4 134 aa14.81□□□□□ -0.04
SPG11-202ENST00000427534 SNX21Q969T3 373 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 LRRC45Q96CN5 670 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 CCDC87Q9NVE4 849 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms