RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ELP3Q9H9T3 547 aa22.7■■□□□ 1.22
GPC1-205ENST00000427506 USP40Q9NVE5 1235 aa22.7■■□□□ 1.22
GPC1-205ENST00000427506 INHBEP58166 350 aa22.69■■□□□ 1.22
GPC1-205ENST00000427506 DGKZQ13574 1117 aa22.69■■□□□ 1.22
GPC1-205ENST00000427506 HMG20BQ9P0W2 317 aa22.69■■□□□ 1.22
GPC1-205ENST00000427506 RCAN3Q9UKA8 241 aa22.69■■□□□ 1.22
GPC1-205ENST00000427506 MAP3K9P80192 1104 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 TCP10Q12799 353 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 ERICH6Q7L0X2 663 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 SPATA5Q8NB90 893 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 FAM151AQ8WW52 585 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 GPR108Q9NPR9 543 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 CSADQ9Y600 493 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 CASP8AP2Q9UKL3 1982 aa22.68■■□□□ 1.22
GPC1-205ENST00000427506 UQCRFS1P1P0C7P4 283 aa22.67■■□□□ 1.22
GPC1-205ENST00000427506 DCAF15Q66K64 600 aa22.67■■□□□ 1.22
GPC1-205ENST00000427506 CEP85Q6P2H3 762 aa22.67■■□□□ 1.22
GPC1-205ENST00000427506 OPTNQ96CV9 577 aa22.67■■□□□ 1.22
GPC1-205ENST00000427506 MCOLN1Q9GZU1 580 aa22.67■■□□□ 1.22
GPC1-205ENST00000427506 ALDH1A1P00352 501 aa22.66■■□□□ 1.22
GPC1-205ENST00000427506 ARID4AP29374 1257 aaPredicted RBP22.66■■□□□ 1.22
GPC1-205ENST00000427506 VGLL4Q14135 290 aa22.66■■□□□ 1.22
GPC1-205ENST00000427506 CCDC158Q5M9N0 1113 aa22.66■■□□□ 1.22
GPC1-205ENST00000427506 TTC39AQ5SRH9 613 aa22.66■■□□□ 1.22
GPC1-205ENST00000427506 PI16Q6UXB8 463 aa22.66■■□□□ 1.22
GPC1-205ENST00000427506 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.66■■□□□ 1.22
GPC1-205ENST00000427506 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.66■■□□□ 1.22
GPC1-205ENST00000427506 NOP58Q9Y2X3 529 aaKnown RBP22.66■■□□□ 1.22
GPC1-205ENST00000427506 RPAP1Q9BWH6 1393 aaPredicted RBP22.65■■□□□ 1.22
GPC1-205ENST00000427506 GJA5P36382 358 aa22.65■■□□□ 1.22
GPC1-205ENST00000427506 NFIAQ12857 509 aa22.65■■□□□ 1.22
GPC1-205ENST00000427506 IFNL1Q8IU54 200 aa22.65■■□□□ 1.22
GPC1-205ENST00000427506 WRNIP1Q96S55 665 aa22.65■■□□□ 1.22
GPC1-205ENST00000427506 COG6Q9Y2V7 657 aa22.65■■□□□ 1.22
GPC1-205ENST00000427506 GAKO14976 1311 aa22.64■■□□□ 1.22
GPC1-205ENST00000427506 MCAMP43121 646 aa22.64■■□□□ 1.21
GPC1-205ENST00000427506 MECOMQ03112 1051 aa22.64■■□□□ 1.21
GPC1-205ENST00000427506 TBC1D9Q6ZT07 1266 aa22.64■■□□□ 1.21
GPC1-205ENST00000427506 MIGA2Q7L4E1 593 aa22.64■■□□□ 1.21
GPC1-205ENST00000427506 DBNDD2Q9BQY9 259 aa22.64■■□□□ 1.21
GPC1-205ENST00000427506 RAI14Q9P0K7 980 aa22.64■■□□□ 1.21
GPC1-205ENST00000427506 DDX19BQ9UMR2 479 aa22.64■■□□□ 1.21
GPC1-205ENST00000427506 BTDP43251 543 aa22.63■■□□□ 1.21
GPC1-205ENST00000427506 GSTO1P78417 241 aa22.63■■□□□ 1.21
GPC1-205ENST00000427506 OTUD7BQ6GQQ9 843 aa22.63■■□□□ 1.21
GPC1-205ENST00000427506 FAM163AQ96GL9 167 aaPredicted RBP22.63■■□□□ 1.21
GPC1-205ENST00000427506 ZNF341Q9BYN7 854 aa22.63■■□□□ 1.21
GPC1-205ENST00000427506 LRP2BPQ9P2M1 347 aa22.63■■□□□ 1.21
GPC1-205ENST00000427506 FAM198AQ9UFP1 575 aa22.63■■□□□ 1.21
GPC1-205ENST00000427506 MROH7-TTC4A0A0A0MT08 1334 aa22.62■■□□□ 1.21
GPC1-205ENST00000427506 CCDC85CA6NKD9 419 aa22.62■■□□□ 1.21
GPC1-205ENST00000427506 GPR25O00155 361 aa22.62■■□□□ 1.21
GPC1-205ENST00000427506 LDHCP07864 332 aa22.62■■□□□ 1.21
GPC1-205ENST00000427506 ZNF296Q8WUU4 475 aaPredicted RBP22.62■■□□□ 1.21
GPC1-205ENST00000427506 CNKSR2Q8WXI2 1034 aa22.62■■□□□ 1.21
GPC1-205ENST00000427506 ZKSCAN4Q969J2 545 aaPredicted RBP22.62■■□□□ 1.21
GPC1-205ENST00000427506 OTUD5Q96G74 571 aa22.62■■□□□ 1.21
GPC1-205ENST00000427506 SNRKQ9NRH2 765 aa22.62■■□□□ 1.21
GPC1-205ENST00000427506 OTOFQ9HC10 1997 aa22.61■■□□□ 1.21
GPC1-205ENST00000427506 IGF2BP3O00425 579 aaKnown RBP eCLIP22.61■■□□□ 1.21
GPC1-205ENST00000427506 RGS3P49796 1198 aa22.61■■□□□ 1.21
GPC1-205ENST00000427506 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
GPC1-205ENST00000427506 CCDC8Q9H0W5 538 aaPredicted RBP22.61■■□□□ 1.21
GPC1-205ENST00000427506 CHMP4BQ9H444 224 aaKnown RBP22.61■■□□□ 1.21
GPC1-205ENST00000427506 EXOC6BQ9Y2D4 811 aa22.61■■□□□ 1.21
GPC1-205ENST00000427506 MYH2Q9UKX2 1941 aa22.61■■□□□ 1.21
GPC1-205ENST00000427506 ENTPD3O75355 529 aa22.6■■□□□ 1.21
GPC1-205ENST00000427506 PICALMQ13492 652 aa22.6■■□□□ 1.21
GPC1-205ENST00000427506 CTU1Q7Z7A3 348 aaKnown RBP22.6■■□□□ 1.21
GPC1-205ENST00000427506 ZSCAN29Q8IWY8 852 aaPredicted RBP22.6■■□□□ 1.21
GPC1-205ENST00000427506 ZFPM1Q8IX07 1006 aa22.6■■□□□ 1.21
GPC1-205ENST00000427506 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.6■■□□□ 1.21
GPC1-205ENST00000427506 NSUN4Q96CB9 384 aaKnown RBP22.6■■□□□ 1.21
GPC1-205ENST00000427506 CFHR5Q9BXR6 569 aa22.6■■□□□ 1.21
GPC1-205ENST00000427506 IDI2Q9BXS1 227 aa22.6■■□□□ 1.21
GPC1-205ENST00000427506 SNCAIPQ9Y6H5 919 aa22.6■■□□□ 1.21
GPC1-205ENST00000427506 GPR75-ASB3A0A0A6YYF3 556 aa22.59■■□□□ 1.21
GPC1-205ENST00000427506 GTF2A2P52657 109 aa22.59■■□□□ 1.21
GPC1-205ENST00000427506 HSP90AB4PQ58FF6 505 aa22.59■■□□□ 1.21
GPC1-205ENST00000427506 ERO1BQ86YB8 467 aa22.59■■□□□ 1.21
GPC1-205ENST00000427506 R3HDMLQ9H3Y0 253 aa22.59■■□□□ 1.21
GPC1-205ENST00000427506 SPDYE5A6NIY4 337 aa22.58■■□□□ 1.21
GPC1-205ENST00000427506 FKTNO75072 461 aa22.58■■□□□ 1.21
GPC1-205ENST00000427506 NOM1Q5C9Z4 860 aaKnown RBP22.58■■□□□ 1.21
GPC1-205ENST00000427506 RPAP2Q8IXW5 612 aaPredicted RBP22.58■■□□□ 1.21
GPC1-205ENST00000427506 ZNF384Q8TF68 577 aa22.58■■□□□ 1.21
GPC1-205ENST00000427506 EAF2Q96CJ1 260 aaPredicted RBP22.58■■□□□ 1.21
GPC1-205ENST00000427506 NOL10Q9BSC4 688 aaKnown RBP22.58■■□□□ 1.21
GPC1-205ENST00000427506 TLR7Q9NYK1 1049 aaKnown RBP22.58■■□□□ 1.21
GPC1-205ENST00000427506 DBNLQ9UJU6 430 aaKnown RBP22.58■■□□□ 1.21
GPC1-205ENST00000427506 CCL15-CCL14A0A0B4J2E2 113 aa22.57■■□□□ 1.2
GPC1-205ENST00000427506 TESPA1A2RU30 521 aaPredicted RBP22.57■■□□□ 1.2
GPC1-205ENST00000427506 HMMRO75330 724 aa22.57■■□□□ 1.2
GPC1-205ENST00000427506 INPP5BP32019 993 aa22.57■■□□□ 1.2
GPC1-205ENST00000427506 CCL15Q16663 113 aa22.57■■□□□ 1.2
GPC1-205ENST00000427506 MS4A4AQ96JQ5 239 aa22.57■■□□□ 1.2
GPC1-205ENST00000427506 ZNF512BQ96KM6 892 aaPredicted RBP22.57■■□□□ 1.2
GPC1-205ENST00000427506 PTPN18Q99952 460 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms