RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 CUL4AQ13619 759 aa21.36■■□□□ 1.01
AC055811.2-201ENST00000427497 ALDH8A1Q9H2A2 487 aaPredicted RBP21.36■■□□□ 1.01
AC055811.2-201ENST00000427497 PDRG1Q9NUG6 133 aa21.36■■□□□ 1.01
AC055811.2-201ENST00000427497 RPS6KB1P23443 525 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 SCNN1DP51172 638 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 COL9A3Q14050 684 aaPredicted RBP21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 LAMA4Q16363 1823 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 BLOC1S2Q6QNY1 142 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 JMYQ8N9B5 988 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 AIDAQ96BJ3 306 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 GPR101Q96P66 508 aaPredicted RBP21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 SALL1Q9NSC2 1324 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 CHMP5Q9NZZ3 219 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 ZNRF3Q9ULT6 936 aa21.35■■□□□ 1.01
AC055811.2-201ENST00000427497 IGSF3O75054 1194 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 TTLL5Q6EMB2 1281 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 STOX1Q6ZVD7 989 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 NEK1Q96PY6 1258 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 RAI14Q9P0K7 980 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 CIZ1Q9ULV3 898 aaPredicted RBP21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 CLEC11AQ9Y240 323 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 ZMYM6O95789 1325 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 PASKQ96RG2 1323 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 MBD4O95243 580 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 CYP7A1P22680 504 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 ALX1Q15699 326 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 TMED8Q6PL24 325 aaPredicted RBP21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 ZNF384Q8TF68 577 aa21.34■■□□□ 1.01
AC055811.2-201ENST00000427497 IL1R1P14778 569 aa21.33■■□□□ 1
AC055811.2-201ENST00000427497 CXCL9Q07325 125 aa21.33■■□□□ 1
AC055811.2-201ENST00000427497 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1
AC055811.2-201ENST00000427497 ITGBL1O95965 494 aaPredicted RBP21.32■■□□□ 1
AC055811.2-201ENST00000427497 EPS15P42566 896 aa21.32■■□□□ 1
AC055811.2-201ENST00000427497 CHAF1AQ13111 956 aaPredicted RBP21.32■■□□□ 1
AC055811.2-201ENST00000427497 IMMTQ16891 758 aaKnown RBP21.32■■□□□ 1
AC055811.2-201ENST00000427497 ADGRA1Q86SQ6 560 aa21.32■■□□□ 1
AC055811.2-201ENST00000427497 WDR66Q8TBY9 1149 aa21.32■■□□□ 1
AC055811.2-201ENST00000427497 NSUN4Q96CB9 384 aaKnown RBP21.32■■□□□ 1
AC055811.2-201ENST00000427497 CD209Q9NNX6 404 aa21.32■■□□□ 1
AC055811.2-201ENST00000427497 CREBZFQ9NS37 354 aa21.32■■□□□ 1
AC055811.2-201ENST00000427497 FOXD4L1Q9NU39 408 aa21.32■■□□□ 1
AC055811.2-201ENST00000427497 PATL2C9JE40 543 aaKnown RBP21.31■■□□□ 1
AC055811.2-201ENST00000427497 GNAT2P19087 354 aa21.31■■□□□ 1
AC055811.2-201ENST00000427497 NOL8Q76FK4 1167 aaKnown RBP21.31■■□□□ 1
AC055811.2-201ENST00000427497 INTS4Q96HW7 963 aaKnown RBP21.31■■□□□ 1
AC055811.2-201ENST00000427497 ARMT1Q9H993 441 aa21.31■■□□□ 1
AC055811.2-201ENST00000427497 E7EWF7 191 aa21.31■■□□□ 1
AC055811.2-201ENST00000427497 C6orf229H3BNL8 230 aa21.31■■□□□ 1
AC055811.2-201ENST00000427497 HMGB1P09429 215 aaKnown RBP21.31■■□□□ 1
AC055811.2-201ENST00000427497 NAA16Q6N069 864 aaPredicted RBP21.31■■□□□ 1
AC055811.2-201ENST00000427497 LCORLQ8N3X6 602 aa21.31■■□□□ 1
AC055811.2-201ENST00000427497 ZGPATQ8N5A5 531 aaKnown RBP21.31■■□□□ 1
AC055811.2-201ENST00000427497 CWC22Q9HCG8 908 aaKnown RBP21.31■■□□□ 1
AC055811.2-201ENST00000427497 PRDX5P30044 214 aa21.3■■□□□ 1
AC055811.2-201ENST00000427497 MECOMQ03112 1051 aa21.3■■□□□ 1
AC055811.2-201ENST00000427497 MAP1SQ66K74 1059 aaPredicted RBP21.3■■□□□ 1
AC055811.2-201ENST00000427497 SPTY2D1Q68D10 685 aaPredicted RBP21.3■■□□□ 1
AC055811.2-201ENST00000427497 RIOK1Q9BRS2 568 aaKnown RBP21.3■■□□□ 1
AC055811.2-201ENST00000427497 EPB41L4AQ9HCS5 686 aaPredicted RBP21.3■■□□□ 1
AC055811.2-201ENST00000427497 GSG1L2A8MUP6 293 aa21.29■■□□□ 1
AC055811.2-201ENST00000427497 ANKRD1Q15327 319 aa21.29■■□□□ 1
AC055811.2-201ENST00000427497 CIAPIN1Q6FI81 312 aa21.29■■□□□ 1
AC055811.2-201ENST00000427497 MIGA1Q8NAN2 632 aa21.29■■□□□ 1
AC055811.2-201ENST00000427497 GPRC5DQ9NZD1 345 aa21.29■■□□□ 1
AC055811.2-201ENST00000427497 MAGEB6P1A0A0J9YX57 407 aa21.28■■□□□ 1
AC055811.2-201ENST00000427497 YDJCA8MPS7 323 aa21.28■■□□□ 1
AC055811.2-201ENST00000427497 RAD17O75943 681 aa21.28■■□□□ 1
AC055811.2-201ENST00000427497 TOB2Q14106 344 aaPredicted RBP21.28■■□□□ 1
AC055811.2-201ENST00000427497 USP50Q70EL3 339 aaPredicted RBP21.28■■□□□ 1
AC055811.2-201ENST00000427497 ZSCAN31Q96LW9 406 aaPredicted RBP21.28■■□□□ 1
AC055811.2-201ENST00000427497 ZNF213O14771 459 aa21.28■■□□□ 1
AC055811.2-201ENST00000427497 APPP05067 770 aa21.28■■□□□ 1
AC055811.2-201ENST00000427497 TNIP1Q15025 636 aa21.28■■□□□ 1
AC055811.2-201ENST00000427497 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
AC055811.2-201ENST00000427497 IFNL3Q8IZI9 196 aa21.28■■□□□ 1
AC055811.2-201ENST00000427497 GMPSP49915 693 aaPredicted RBP21.27■■□□□ 1
AC055811.2-201ENST00000427497 HAND2P61296 217 aa21.27■■□□□ 1
AC055811.2-201ENST00000427497 EXOSC10Q01780 885 aaKnown RBP21.27■■□□□ 1
AC055811.2-201ENST00000427497 TCEANC2Q96MN5 208 aa21.27■■□□□ 1
AC055811.2-201ENST00000427497 NBPF3Q9H094 633 aa21.27■■□□□ 1
AC055811.2-201ENST00000427497 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
AC055811.2-201ENST00000427497 JAG2Q9Y219 1238 aa21.27■■□□□ 1
AC055811.2-201ENST00000427497 SLC4A4Q9Y6R1 1079 aa21.27■■□□□ 1
AC055811.2-201ENST00000427497 PRKAB2O43741 272 aa21.26■□□□□ 0.99
AC055811.2-201ENST00000427497 EYA3Q99504 573 aa21.26■□□□□ 0.99
AC055811.2-201ENST00000427497 LARP6Q9BRS8 491 aaKnown RBP21.26■□□□□ 0.99
AC055811.2-201ENST00000427497 COA1Q9GZY4 146 aa21.26■□□□□ 0.99
AC055811.2-201ENST00000427497 ADARB2Q9NS39 739 aaKnown RBP21.26■□□□□ 0.99
AC055811.2-201ENST00000427497 FAM205AQ6ZU69 1335 aa21.26■□□□□ 0.99
AC055811.2-201ENST00000427497 TMEM88BA6NKF7 163 aa21.25■□□□□ 0.99
AC055811.2-201ENST00000427497 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
AC055811.2-201ENST00000427497 LARGE1O95461 756 aa21.25■□□□□ 0.99
AC055811.2-201ENST00000427497 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
AC055811.2-201ENST00000427497 AGXT2Q9BYV1 514 aa21.25■□□□□ 0.99
AC055811.2-201ENST00000427497 DBNDD1Q9H9R9 158 aa21.25■□□□□ 0.99
AC055811.2-201ENST00000427497 TPCN1Q9ULQ1 816 aa21.25■□□□□ 0.99
AC055811.2-201ENST00000427497 NACAP1Q9BZK3 213 aa21.24■□□□□ 0.99
AC055811.2-201ENST00000427497 ZC3H12CQ9C0D7 883 aaKnown RBP21.24■□□□□ 0.99
AC055811.2-201ENST00000427497 NAPBQ9H115 298 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms