RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 TTLL12Q14166 644 aaPredicted RBP21.1■□□□□ 0.97
LMCD1-204ENST00000426878 CDC42EP5Q6NZY7 148 aa21.1■□□□□ 0.97
LMCD1-204ENST00000426878 TBC1D9Q6ZT07 1266 aa21.1■□□□□ 0.97
LMCD1-204ENST00000426878 ZNF384Q8TF68 577 aa21.1■□□□□ 0.97
LMCD1-204ENST00000426878 AOC2O75106 756 aa21.09■□□□□ 0.97
LMCD1-204ENST00000426878 SLC10A3P09131 477 aa21.09■□□□□ 0.97
LMCD1-204ENST00000426878 CACNB3P54284 484 aa21.09■□□□□ 0.97
LMCD1-204ENST00000426878 NSUN4Q96CB9 384 aaKnown RBP21.09■□□□□ 0.97
LMCD1-204ENST00000426878 TMEM39BQ9GZU3 492 aa21.09■□□□□ 0.97
LMCD1-204ENST00000426878 DCTPP1Q9H773 170 aa21.09■□□□□ 0.97
LMCD1-204ENST00000426878 SNRKQ9NRH2 765 aa21.09■□□□□ 0.97
LMCD1-204ENST00000426878 APBB1O00213 710 aa21.08■□□□□ 0.97
LMCD1-204ENST00000426878 CYP2E1P05181 493 aaPredicted RBP21.08■□□□□ 0.97
LMCD1-204ENST00000426878 LDHCP07864 332 aa21.08■□□□□ 0.97
LMCD1-204ENST00000426878 GSTO1P78417 241 aa21.08■□□□□ 0.97
LMCD1-204ENST00000426878 ANGEL1Q9UNK9 670 aaKnown RBP21.08■□□□□ 0.97
LMCD1-204ENST00000426878 PCDHB15Q9Y5E8 787 aa21.08■□□□□ 0.97
LMCD1-204ENST00000426878 MROH7-TTC4A0A0A0MT08 1334 aa21.08■□□□□ 0.96
LMCD1-204ENST00000426878 RPAP1Q9BWH6 1393 aaPredicted RBP21.07■□□□□ 0.96
LMCD1-204ENST00000426878 GPR75-ASB3A0A0A6YYF3 556 aa21.07■□□□□ 0.96
LMCD1-204ENST00000426878 ZAP70P43403 619 aa21.07■□□□□ 0.96
LMCD1-204ENST00000426878 CRBNQ96SW2 442 aa21.07■□□□□ 0.96
LMCD1-204ENST00000426878 USP40Q9NVE5 1235 aa21.07■□□□□ 0.96
LMCD1-204ENST00000426878 RAI14Q9P0K7 980 aa21.07■□□□□ 0.96
LMCD1-204ENST00000426878 LRP2BPQ9P2M1 347 aa21.07■□□□□ 0.96
LMCD1-204ENST00000426878 MAP4K4O95819 1239 aaPredicted RBP21.06■□□□□ 0.96
LMCD1-204ENST00000426878 IFIT2P09913 472 aaKnown RBP21.06■□□□□ 0.96
LMCD1-204ENST00000426878 AAMPQ13685 434 aa21.06■□□□□ 0.96
LMCD1-204ENST00000426878 PRKG1Q13976 671 aa21.06■□□□□ 0.96
LMCD1-204ENST00000426878 RASAL3Q86YV0 1011 aa21.06■□□□□ 0.96
LMCD1-204ENST00000426878 FAM151AQ8WW52 585 aa21.06■□□□□ 0.96
LMCD1-204ENST00000426878 IDI2Q9BXS1 227 aa21.06■□□□□ 0.96
LMCD1-204ENST00000426878 LRRCC1Q9C099 1032 aa21.06■□□□□ 0.96
LMCD1-204ENST00000426878 USP2O75604 605 aaPredicted RBP21.05■□□□□ 0.96
LMCD1-204ENST00000426878 CDAN1Q8IWY9 1227 aa21.05■□□□□ 0.96
LMCD1-204ENST00000426878 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.05■□□□□ 0.96
LMCD1-204ENST00000426878 BTDP43251 543 aa21.04■□□□□ 0.96
LMCD1-204ENST00000426878 IREB2P48200 963 aaKnown RBP21.04■□□□□ 0.96
LMCD1-204ENST00000426878 AIDAQ96BJ3 306 aa21.04■□□□□ 0.96
LMCD1-204ENST00000426878 HOOK2Q96ED9 719 aa21.04■□□□□ 0.96
LMCD1-204ENST00000426878 ZIC5Q96T25 663 aa21.04■□□□□ 0.96
LMCD1-204ENST00000426878 FAM198AQ9UFP1 575 aa21.04■□□□□ 0.96
LMCD1-204ENST00000426878 FZD1Q9UP38 647 aa21.04■□□□□ 0.96
LMCD1-204ENST00000426878 NFIAQ12857 509 aa21.04■□□□□ 0.96
LMCD1-204ENST00000426878 TMED8Q6PL24 325 aaPredicted RBP21.04■□□□□ 0.96
LMCD1-204ENST00000426878 REM2Q8IYK8 340 aaPredicted RBP21.04■□□□□ 0.96
LMCD1-204ENST00000426878 RFX7Q2KHR2 1363 aa21.03■□□□□ 0.96
LMCD1-204ENST00000426878 FOXN1O15353 648 aa21.03■□□□□ 0.96
LMCD1-204ENST00000426878 ENTPD3O75355 529 aa21.03■□□□□ 0.96
LMCD1-204ENST00000426878 RHBDL3P58872 404 aa21.03■□□□□ 0.96
LMCD1-204ENST00000426878 KIF23Q02241 960 aaPredicted RBP21.03■□□□□ 0.96
LMCD1-204ENST00000426878 PIH1D3Q9NQM4 214 aaKnown RBP21.03■□□□□ 0.96
LMCD1-204ENST00000426878 NPM3O75607 178 aaKnown RBP21.02■□□□□ 0.96
LMCD1-204ENST00000426878 WDHD1O75717 1129 aaPredicted RBP21.02■□□□□ 0.96
LMCD1-204ENST00000426878 NAA16Q6N069 864 aaPredicted RBP21.02■□□□□ 0.96
LMCD1-204ENST00000426878 ANKRD13AQ8IZ07 590 aa21.02■□□□□ 0.96
LMCD1-204ENST00000426878 BEGAINQ9BUH8 593 aa21.02■□□□□ 0.96
LMCD1-204ENST00000426878 MAST2Q6P0Q8 1798 aa21.02■□□□□ 0.95
LMCD1-204ENST00000426878 CA12O43570 354 aa21.01■□□□□ 0.95
LMCD1-204ENST00000426878 CTCFP49711 727 aaPredicted RBP21.01■□□□□ 0.95
LMCD1-204ENST00000426878 PPP4CP60510 307 aa21.01■□□□□ 0.95
LMCD1-204ENST00000426878 SLC10A4Q96EP9 437 aa21.01■□□□□ 0.95
LMCD1-204ENST00000426878 MYO5AQ9Y4I1 1855 aaKnown RBP21■□□□□ 0.95
LMCD1-204ENST00000426878 ATP5JP18859 108 aa21■□□□□ 0.95
LMCD1-204ENST00000426878 RGS3P49796 1198 aa21■□□□□ 0.95
LMCD1-204ENST00000426878 TCP10Q12799 353 aa21■□□□□ 0.95
LMCD1-204ENST00000426878 CSRNP1Q96S65 589 aa21■□□□□ 0.95
LMCD1-204ENST00000426878 TTF1Q15361 905 aaPredicted RBP20.99■□□□□ 0.95
LMCD1-204ENST00000426878 SPRYD7Q5W111 196 aa20.99■□□□□ 0.95
LMCD1-204ENST00000426878 DCAF15Q66K64 600 aa20.99■□□□□ 0.95
LMCD1-204ENST00000426878 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.99■□□□□ 0.95
LMCD1-204ENST00000426878 CLMNQ96JQ2 1002 aa20.99■□□□□ 0.95
LMCD1-204ENST00000426878 ANTXR1Q9H6X2 564 aa20.99■□□□□ 0.95
LMCD1-204ENST00000426878 NDUFB9Q9Y6M9 179 aa20.99■□□□□ 0.95
LMCD1-204ENST00000426878 SMARCA5O60264 1052 aaPredicted RBP20.98■□□□□ 0.95
LMCD1-204ENST00000426878 BAG3O95817 575 aa20.98■□□□□ 0.95
LMCD1-204ENST00000426878 ZBTB48P10074 688 aaPredicted RBP20.98■□□□□ 0.95
LMCD1-204ENST00000426878 MAP3K9P80192 1104 aa20.98■□□□□ 0.95
LMCD1-204ENST00000426878 HDAC1Q13547 482 aaPredicted RBP20.98■□□□□ 0.95
LMCD1-204ENST00000426878 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.98■□□□□ 0.95
LMCD1-204ENST00000426878 ZFPM1Q8IX07 1006 aa20.98■□□□□ 0.95
LMCD1-204ENST00000426878 NOL10Q9BSC4 688 aaKnown RBP20.98■□□□□ 0.95
LMCD1-204ENST00000426878 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
LMCD1-204ENST00000426878 DOCK2Q92608 1830 aa20.98■□□□□ 0.95
LMCD1-204ENST00000426878 IDH1O75874 414 aaKnown RBP20.97■□□□□ 0.95
LMCD1-204ENST00000426878 PLCG2P16885 1265 aa20.97■□□□□ 0.95
LMCD1-204ENST00000426878 MAP3K12Q12852 859 aa20.97■□□□□ 0.95
LMCD1-204ENST00000426878 DDX4Q9NQI0 724 aaKnown RBP20.97■□□□□ 0.95
LMCD1-204ENST00000426878 OTOFQ9HC10 1997 aa20.97■□□□□ 0.95
LMCD1-204ENST00000426878 TM4SF4P48230 202 aa20.96■□□□□ 0.95
LMCD1-204ENST00000426878 ADGRA1Q86SQ6 560 aa20.96■□□□□ 0.95
LMCD1-204ENST00000426878 CERS3Q8IU89 383 aa20.96■□□□□ 0.95
LMCD1-204ENST00000426878 ZNF341Q9BYN7 854 aa20.96■□□□□ 0.95
LMCD1-204ENST00000426878 PRDM10Q9NQV6 1147 aa20.96■□□□□ 0.95
LMCD1-204ENST00000426878 AK9Q5TCS8 1911 aa20.96■□□□□ 0.95
LMCD1-204ENST00000426878 COL2A1P02458 1487 aaPredicted RBP20.96■□□□□ 0.95
LMCD1-204ENST00000426878 ATRNL1Q5VV63 1379 aa20.96■□□□□ 0.95
LMCD1-204ENST00000426878 HSPA8P11142 646 aaKnown RBP20.95■□□□□ 0.95
LMCD1-204ENST00000426878 CYP7A1P22680 504 aa20.95■□□□□ 0.95
LMCD1-204ENST00000426878 MAP3K10Q02779 954 aa20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms