RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 APOBEC3HQ6NTF7 200 aaKnown RBP18.45■□□□□ 0.54
PDAP1-202ENST00000426447 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
PDAP1-202ENST00000426447 RBM27Q9P2N5 1060 aaKnown RBP18.45■□□□□ 0.54
PDAP1-202ENST00000426447 A0A1B0GUL6 1792 aa18.45■□□□□ 0.54
PDAP1-202ENST00000426447 PDE8BO95263 885 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 NBPF7P0C2Y1 421 aaPredicted RBP18.44■□□□□ 0.54
PDAP1-202ENST00000426447 INPP5BP32019 993 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 UBXN2AP68543 259 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 LRRC24Q50LG9 513 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 SHISA4Q96DD7 197 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 RNF208Q9H0X6 261 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 SUGT1Q9Y2Z0 365 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 MYPNQ86TC9 1320 aa18.44■□□□□ 0.54
PDAP1-202ENST00000426447 GJB1P08034 283 aa18.43■□□□□ 0.54
PDAP1-202ENST00000426447 CCL5P13501 91 aa18.43■□□□□ 0.54
PDAP1-202ENST00000426447 CTGFP29279 349 aa18.43■□□□□ 0.54
PDAP1-202ENST00000426447 GJA8P48165 433 aa18.43■□□□□ 0.54
PDAP1-202ENST00000426447 HHIPL2Q6UWX4 724 aa18.43■□□□□ 0.54
PDAP1-202ENST00000426447 KAZALD1Q96I82 304 aa18.43■□□□□ 0.54
PDAP1-202ENST00000426447 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
PDAP1-202ENST00000426447 NR2E3Q9Y5X4 410 aa18.43■□□□□ 0.54
PDAP1-202ENST00000426447 IFIT1P09914 478 aaKnown RBP18.42■□□□□ 0.54
PDAP1-202ENST00000426447 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
PDAP1-202ENST00000426447 TCP10Q12799 353 aa18.42■□□□□ 0.54
PDAP1-202ENST00000426447 FAM151AQ8WW52 585 aa18.42■□□□□ 0.54
PDAP1-202ENST00000426447 ARAP2Q8WZ64 1704 aa18.41■□□□□ 0.54
PDAP1-202ENST00000426447 FCGRTP55899 365 aa18.41■□□□□ 0.54
PDAP1-202ENST00000426447 PARK7Q99497 189 aaKnown RBP18.4■□□□□ 0.54
PDAP1-202ENST00000426447 KCNH4Q9UQ05 1017 aa18.4■□□□□ 0.54
PDAP1-202ENST00000426447 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
PDAP1-202ENST00000426447 PRKCZQ05513 592 aa18.39■□□□□ 0.53
PDAP1-202ENST00000426447 PUM3Q15397 648 aaKnown RBP18.39■□□□□ 0.53
PDAP1-202ENST00000426447 VGLL2Q8N8G2 317 aa18.39■□□□□ 0.53
PDAP1-202ENST00000426447 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
PDAP1-202ENST00000426447 WDR66Q8TBY9 1149 aa18.39■□□□□ 0.53
PDAP1-202ENST00000426447 ZNF112Q9UJU3 913 aa18.39■□□□□ 0.53
PDAP1-202ENST00000426447 ZSWIM8A7E2V4 1837 aa18.39■□□□□ 0.53
PDAP1-202ENST00000426447 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
PDAP1-202ENST00000426447 CYP2C8P10632 490 aa18.38■□□□□ 0.53
PDAP1-202ENST00000426447 RABL6Q3YEC7 729 aaPredicted RBP18.38■□□□□ 0.53
PDAP1-202ENST00000426447 SLAIN1Q8ND83 568 aa18.38■□□□□ 0.53
PDAP1-202ENST00000426447 U2AF1L4Q8WU68 220 aaKnown RBP18.38■□□□□ 0.53
PDAP1-202ENST00000426447 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
PDAP1-202ENST00000426447 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
PDAP1-202ENST00000426447 UTYO14607 1347 aa18.38■□□□□ 0.53
PDAP1-202ENST00000426447 CXCL11O14625 94 aa18.37■□□□□ 0.53
PDAP1-202ENST00000426447 FARP2O94887 1054 aaPredicted RBP18.37■□□□□ 0.53
PDAP1-202ENST00000426447 CDC42EP5Q6NZY7 148 aa18.37■□□□□ 0.53
PDAP1-202ENST00000426447 SLC17A8Q8NDX2 589 aa18.37■□□□□ 0.53
PDAP1-202ENST00000426447 ADGRA2Q96PE1 1338 aa18.37■□□□□ 0.53
PDAP1-202ENST00000426447 ADCY3O60266 1144 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 EVI5O60447 810 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 SGPL1O95470 568 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 TFRCP02786 760 aaKnown RBP18.36■□□□□ 0.53
PDAP1-202ENST00000426447 SLC5A1P13866 664 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 MOGSQ13724 837 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 NOL9Q5SY16 702 aaKnown RBP18.36■□□□□ 0.53
PDAP1-202ENST00000426447 FASTKD5Q7L8L6 764 aaKnown RBP18.36■□□□□ 0.53
PDAP1-202ENST00000426447 UBE2Q1Q7Z7E8 422 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 ANKRD44Q8N8A2 993 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 UNC93B1Q9H1C4 597 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 GABRQQ9UN88 632 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 DAGLAQ9Y4D2 1042 aa18.36■□□□□ 0.53
PDAP1-202ENST00000426447 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
PDAP1-202ENST00000426447 BCRP11274 1271 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 FGFR2P21802 821 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 NFIAQ12857 509 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 DIXDC1Q155Q3 683 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 GPAT2Q6NUI2 795 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 PICK1Q9NRD5 415 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 ZHX2Q9Y6X8 837 aa18.35■□□□□ 0.53
PDAP1-202ENST00000426447 DLL1O00548 723 aa18.34■□□□□ 0.53
PDAP1-202ENST00000426447 LDHBP07195 334 aaKnown RBP18.34■□□□□ 0.53
PDAP1-202ENST00000426447 GADL1Q6ZQY3 521 aa18.34■□□□□ 0.53
PDAP1-202ENST00000426447 LPIN2Q92539 896 aa18.34■□□□□ 0.53
PDAP1-202ENST00000426447 TRIOBPQ9H2D6 2365 aa18.33■□□□□ 0.53
PDAP1-202ENST00000426447 FLT3LGP49771 235 aa18.33■□□□□ 0.52
PDAP1-202ENST00000426447 PRO3102Q9H379 93 aa18.33■□□□□ 0.52
PDAP1-202ENST00000426447 GNL3LQ9NVN8 582 aaKnown RBP18.33■□□□□ 0.52
PDAP1-202ENST00000426447 FAM198AQ9UFP1 575 aa18.33■□□□□ 0.52
PDAP1-202ENST00000426447 TAOK2Q9UL54 1235 aa18.33■□□□□ 0.52
PDAP1-202ENST00000426447 EYA2O00167 538 aa18.32■□□□□ 0.52
PDAP1-202ENST00000426447 TNPO2O14787 897 aaKnown RBP18.32■□□□□ 0.52
PDAP1-202ENST00000426447 ELNP15502 786 aa18.32■□□□□ 0.52
PDAP1-202ENST00000426447 PRDX5P30044 214 aa18.32■□□□□ 0.52
PDAP1-202ENST00000426447 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
PDAP1-202ENST00000426447 ZFPM1Q8IX07 1006 aa18.32■□□□□ 0.52
PDAP1-202ENST00000426447 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
PDAP1-202ENST00000426447 SMCR8Q8TEV9 937 aaPredicted RBP18.32■□□□□ 0.52
PDAP1-202ENST00000426447 DEFB118Q96PH6 123 aa18.32■□□□□ 0.52
PDAP1-202ENST00000426447 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
PDAP1-202ENST00000426447 A0A0G2JLL6 359 aaPredicted RBP18.31■□□□□ 0.52
PDAP1-202ENST00000426447 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
PDAP1-202ENST00000426447 INHAP05111 366 aa18.31■□□□□ 0.52
PDAP1-202ENST00000426447 CAPN2P17655 700 aa18.31■□□□□ 0.52
PDAP1-202ENST00000426447 PTPRAP18433 802 aa18.31■□□□□ 0.52
PDAP1-202ENST00000426447 PRRT2Q7Z6L0 340 aaPredicted RBP18.31■□□□□ 0.52
PDAP1-202ENST00000426447 PXYLP1Q8TE99 480 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms