RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 FZD9O00144 591 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 ANP32AP39687 249 aaKnown RBP18.83■□□□□ 0.6
SCRN1-205ENST00000425819 EIF6P56537 245 aaKnown RBP18.83■□□□□ 0.6
SCRN1-205ENST00000425819 PPP4CP60510 307 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 TNIP1Q15025 636 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 RNF20Q5VTR2 975 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 HHIPL2Q6UWX4 724 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 IFNL3Q8IZI9 196 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 GMLQ99445 158 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.6
SCRN1-205ENST00000425819 CYP21A2P08686 494 aa18.82■□□□□ 0.6
SCRN1-205ENST00000425819 ZKSCAN1P17029 563 aaPredicted RBP18.82■□□□□ 0.6
SCRN1-205ENST00000425819 RBM5P52756 815 aaKnown RBP eCLIP18.82■□□□□ 0.6
SCRN1-205ENST00000425819 ANAPC15P60006 121 aa18.82■□□□□ 0.6
SCRN1-205ENST00000425819 KCNB2Q92953 911 aa18.82■□□□□ 0.6
SCRN1-205ENST00000425819 NACAP1Q9BZK3 213 aa18.82■□□□□ 0.6
SCRN1-205ENST00000425819 NAPBQ9H115 298 aa18.82■□□□□ 0.6
SCRN1-205ENST00000425819 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
SCRN1-205ENST00000425819 MYH2Q9UKX2 1941 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 TDO2P48775 406 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 HAND2P61296 217 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 AGBL3Q8NEM8 1001 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 PCDHAC2Q9Y5I4 1007 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 ZNF541Q9H0D2 1346 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 RPAP1Q9BWH6 1393 aaPredicted RBP18.81■□□□□ 0.6
SCRN1-205ENST00000425819 PSME4Q14997 1843 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 GOLGB1Q14789 3259 aaKnown RBP18.81■□□□□ 0.6
SCRN1-205ENST00000425819 HDLBPQ00341 1268 aaKnown RBP18.81■□□□□ 0.6
SCRN1-205ENST00000425819 ALX1Q15699 326 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 MRIQ9BWK5 157 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 SERPINA10Q9UK55 444 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
SCRN1-205ENST00000425819 PLCG2P16885 1265 aa18.8■□□□□ 0.6
SCRN1-205ENST00000425819 USP5P45974 858 aa18.8■□□□□ 0.6
SCRN1-205ENST00000425819 RHBDL3P58872 404 aa18.8■□□□□ 0.6
SCRN1-205ENST00000425819 IMMTQ16891 758 aaKnown RBP18.8■□□□□ 0.6
SCRN1-205ENST00000425819 APOBEC3HQ6NTF7 200 aaKnown RBP18.8■□□□□ 0.6
SCRN1-205ENST00000425819 CERS3Q8IU89 383 aa18.8■□□□□ 0.6
SCRN1-205ENST00000425819 TEX11Q8IYF3 940 aa18.8■□□□□ 0.6
SCRN1-205ENST00000425819 ZDHHC15Q96MV8 337 aa18.8■□□□□ 0.6
SCRN1-205ENST00000425819 HDAC9Q9UKV0 1011 aa18.8■□□□□ 0.6
SCRN1-205ENST00000425819 USP17L8P0C7I0 530 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 RABEP1Q15276 862 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 ADCK5Q3MIX3 580 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 CFAP100Q494V2 611 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 OGFOD1Q8N543 542 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 TGFBRAP1Q8WUH2 860 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
SCRN1-205ENST00000425819 USP40Q9NVE5 1235 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 ZMYM6O95789 1325 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 ADAMTSL1Q8N6G6 1762 aa18.79■□□□□ 0.6
SCRN1-205ENST00000425819 ZNF213O14771 459 aa18.78■□□□□ 0.6
SCRN1-205ENST00000425819 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
SCRN1-205ENST00000425819 CDC42EP5Q6NZY7 148 aa18.78■□□□□ 0.6
SCRN1-205ENST00000425819 IL17RAQ96F46 866 aa18.78■□□□□ 0.6
SCRN1-205ENST00000425819 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
SCRN1-205ENST00000425819 JAKMIP1Q96N16 626 aaKnown RBP18.78■□□□□ 0.6
SCRN1-205ENST00000425819 ATP8A2Q9NTI2 1148 aa18.78■□□□□ 0.6
SCRN1-205ENST00000425819 GMPSP49915 693 aaPredicted RBP18.77■□□□□ 0.6
SCRN1-205ENST00000425819 TSGA10IPQ3SY00 556 aa18.77■□□□□ 0.6
SCRN1-205ENST00000425819 GIMAP6Q6P9H5 292 aa18.77■□□□□ 0.6
SCRN1-205ENST00000425819 MAPKAPK5Q8IW41 473 aa18.77■□□□□ 0.6
SCRN1-205ENST00000425819 SHTN1A0MZ66 631 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 GRIN3BO60391 1043 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 RPS12P25398 132 aaKnown RBP18.76■□□□□ 0.59
SCRN1-205ENST00000425819 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 UPF3BQ9BZI7 483 aaKnown RBP18.76■□□□□ 0.59
SCRN1-205ENST00000425819 CYP2D7A0A087X1C5 515 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 MINDY4BA8MYZ0 360 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 CASTP20810 708 aaKnown RBP18.76■□□□□ 0.59
SCRN1-205ENST00000425819 KRT32Q14532 448 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 NBPF3Q9H094 633 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 MCM9Q9NXL9 1143 aa18.76■□□□□ 0.59
SCRN1-205ENST00000425819 USP17L12C9JPN9 530 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 USP17L21D6R901 530 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 E7EWF7 191 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 CPA1P15085 419 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 NEK4P51957 841 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 CTDSPL2Q05D32 466 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 PICALMQ13492 652 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 DLGAP5Q15398 846 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 SLC4A8Q2Y0W8 1093 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
SCRN1-205ENST00000425819 PRMT6Q96LA8 375 aaPredicted RBP18.75■□□□□ 0.59
SCRN1-205ENST00000425819 MKRN1Q9UHC7 482 aaKnown RBP18.75■□□□□ 0.59
SCRN1-205ENST00000425819 SBF1O95248 1867 aa18.74■□□□□ 0.59
SCRN1-205ENST00000425819 FLT1P17948 1338 aa18.74■□□□□ 0.59
SCRN1-205ENST00000425819 WDHD1O75717 1129 aaPredicted RBP18.74■□□□□ 0.59
SCRN1-205ENST00000425819 CYP2D6P10635 497 aa18.74■□□□□ 0.59
SCRN1-205ENST00000425819 PSMA5P28066 241 aa18.74■□□□□ 0.59
SCRN1-205ENST00000425819 CACNB3P54284 484 aa18.74■□□□□ 0.59
SCRN1-205ENST00000425819 PPARAQ07869 468 aa18.74■□□□□ 0.59
SCRN1-205ENST00000425819 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
SCRN1-205ENST00000425819 TDRD3Q9H7E2 651 aaKnown RBP18.74■□□□□ 0.59
SCRN1-205ENST00000425819 SAP30BPQ9UHR5 308 aaKnown RBP18.74■□□□□ 0.59
SCRN1-205ENST00000425819 SPDYE2BA6NHP3 402 aa18.73■□□□□ 0.59
SCRN1-205ENST00000425819 SMIM22K7EJ46 135 aa18.73■□□□□ 0.59
SCRN1-205ENST00000425819 SPDYE6P0CI01 402 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms