RNA–Protein interactions for RNA: ENST00000423536.5

SNHG17-204, Transcript of small nucleolar RNA host gene 17, human

TSL 2 BASIC

Gene SNHG17, Length 517 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-204	ENST00000423536	MAGEA10	P43363	369 aa	Predicted RBP	10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	CHAF1A	Q13111	956 aa	Predicted RBP	10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	GCKR	Q14397	625 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	GADL1	Q6ZQY3	521 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	FAM83A	Q86UY5	434 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	ANKLE1	Q8NAG6	615 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	SYMPK	Q92797	1274 aa	Known RBP	10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	FAM161B	Q96MY7	647 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	PLA2G12B	Q9BX93	195 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	C11orf49	Q9H6J7	331 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	CUL9	Q8IWT3	2517 aa		10.45	□□□□□ -0.74
SNHG17-204	ENST00000423536	ZNF646	O15015	1829 aa	Predicted RBP	10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	BRCA2	P51587	3418 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	CXCL11	O14625	94 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	SLC4A2	P04920	1241 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	GYG1	P46976	350 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	HDLBP	Q00341	1268 aa	Known RBP	10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	CAVIN4	Q5BKX8	364 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	C8orf58	Q8NAV2	365 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	TDRD7	Q8NHU6	1098 aa	Known RBP	10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	TBC1D22A	Q8WUA7	517 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	HMX1	Q9NP08	348 aa	Predicted RBP	10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	IFT57	Q9NWB7	429 aa		10.44	□□□□□ -0.74
SNHG17-204	ENST00000423536	INPP5B	P32019	993 aa		10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	IRF5	Q13568	498 aa		10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	UBE4A	Q14139	1066 aa		10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	RALBP1	Q15311	655 aa		10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	DIS3L	Q8TF46	1054 aa	Known RBP	10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	CRISPLD2	Q9H0B8	497 aa		10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.43	□□□□□ -0.74	2e-6	■■□□□ 13.6
SNHG17-204	ENST00000423536	PICK1	Q9NRD5	415 aa		10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	CEP290	O15078	2479 aa		10.43	□□□□□ -0.74
SNHG17-204	ENST00000423536	HTT	P42858	3142 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	BCR	P11274	1271 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	TCP10	Q12799	353 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	ZNF697	Q5TEC3	545 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	FAM84B	Q96KN1	310 aa	Predicted RBP	10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	MRI	Q9BWK5	157 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	PAK6	Q9NQU5	681 aa	Predicted RBP	10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	KCNH4	Q9UQ05	1017 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	ZHX2	Q9Y6X8	837 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	ECM29	Q5VYK3	1845 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	SPEF2	Q9C093	1822 aa		10.42	□□□□□ -0.74
SNHG17-204	ENST00000423536	ADGRA2	Q96PE1	1338 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	ZNF853	P0CG23	659 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	COL9A1	P20849	921 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	MDM2	Q00987	491 aa	Predicted RBP	10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	FKBP5	Q13451	457 aa	Predicted RBP	10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	FKBP1C	Q5VVH2	108 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	LMBR1L	Q6UX01	489 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	FAM151A	Q8WW52	585 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	ZNF594	Q96JF6	807 aa	Predicted RBP	10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	ADAMTS8	Q9UP79	889 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	CENPF	P49454	3210 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	LAMB1	P07942	1786 aa		10.41	□□□□□ -0.74
SNHG17-204	ENST00000423536	ZSWIM8	A7E2V4	1837 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	MAST3	O60307	1309 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	POTEB2	H3BUK9	544 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	GPAT2	Q6NUI2	795 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	ANKRD13C	Q8N6S4	541 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	LINS1	Q8NG48	757 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	DNAAF4	Q8WXU2	420 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	ZDHHC15	Q96MV8	337 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	PRKAG2	Q9UGJ0	569 aa		10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	LRRFIP2	Q9Y608	721 aa	Known RBP	10.4	□□□□□ -0.74
SNHG17-204	ENST00000423536	HMGCR	P04035	888 aa		10.39	□□□□□ -0.75
SNHG17-204	ENST00000423536	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.39	□□□□□ -0.75
SNHG17-204	ENST00000423536	MAFA	Q8NHW3	353 aa	Predicted RBP	10.39	□□□□□ -0.75
SNHG17-204	ENST00000423536	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.39	□□□□□ -0.75
SNHG17-204	ENST00000423536	ZNF112	Q9UJU3	913 aa		10.39	□□□□□ -0.75
SNHG17-204	ENST00000423536	PNMA3	Q9UL41	463 aa		10.39	□□□□□ -0.75
SNHG17-204	ENST00000423536	FOXO4	P98177	505 aa		10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	HHIPL2	Q6UWX4	724 aa		10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	G2E3	Q7L622	706 aa		10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	CCAR1	Q8IX12	1150 aa	Known RBP	10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	TSPYL6	Q8N831	410 aa		10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	GUCD1	Q96NT3	240 aa		10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	USP40	Q9NVE5	1235 aa		10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	SLC45A1	Q9Y2W3	748 aa		10.38	□□□□□ -0.75
SNHG17-204	ENST00000423536	MYH3	P11055	1940 aa		10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	APAF1	O14727	1248 aa		10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	CASP7	P55210	303 aa		10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	DDX10	Q13206	875 aa	Known RBP	10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.37	□□□□□ -0.75	1e-6	■■□□□ 13.4
SNHG17-204	ENST00000423536	MOGS	Q13724	837 aa		10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	GRIK5	Q16478	980 aa		10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	TWISTNB	Q3B726	338 aa	Predicted RBP	10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	NOL9	Q5SY16	702 aa	Known RBP	10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	CDX2	Q99626	313 aa	Predicted RBP	10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	SUGT1	Q9Y2Z0	365 aa		10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	RANBP2	P49792	3224 aa	Known RBP	10.37	□□□□□ -0.75
SNHG17-204	ENST00000423536	MROH5	Q6ZUA9	1318 aa		10.36	□□□□□ -0.75
SNHG17-204	ENST00000423536	OTOF	Q9HC10	1997 aa		10.36	□□□□□ -0.75
SNHG17-204	ENST00000423536		A0A0G2JLL6	359 aa	Predicted RBP	10.36	□□□□□ -0.75
SNHG17-204	ENST00000423536	TRIM75P	A6NK02	468 aa		10.36	□□□□□ -0.75

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