RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
LINC00458-201ENST00000423442 FAM46AQ96IP4 442 aaKnown RBP8.64□□□□□ -1.03
LINC00458-201ENST00000423442 POP1Q99575 1024 aaKnown RBP8.64□□□□□ -1.03
LINC00458-201ENST00000423442 STIM2Q9P246 746 aa8.64□□□□□ -1.03
LINC00458-201ENST00000423442 OAS3Q9Y6K5 1087 aaKnown RBP8.64□□□□□ -1.03
LINC00458-201ENST00000423442 KDM5DQ9BY66 1539 aa8.64□□□□□ -1.03
LINC00458-201ENST00000423442 XIRP1Q702N8 1843 aaKnown RBP8.64□□□□□ -1.03
LINC00458-201ENST00000423442 ZC3H13Q5T200 1668 aaKnown RBP8.63□□□□□ -1.03
LINC00458-201ENST00000423442 HMX2A2RU54 273 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 KIAA1324LA8MWY0 1029 aaPredicted RBP8.63□□□□□ -1.03
LINC00458-201ENST00000423442 ADAMTS4O75173 837 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 TXKP42681 527 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 TMEM164Q5U3C3 297 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 NCAPG2Q86XI2 1143 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 KLHDC7BQ96G42 594 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 FMNL2Q96PY5 1086 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 TMEM63CQ9P1W3 806 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 EHBP1L1Q8N3D4 1523 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 MBD5Q9P267 1494 aa8.63□□□□□ -1.03
LINC00458-201ENST00000423442 FAM117BQ6P1L5 589 aa8.62□□□□□ -1.03
LINC00458-201ENST00000423442 KLHL23Q8NBE8 558 aa8.62□□□□□ -1.03
LINC00458-201ENST00000423442 KANSL3Q9P2N6 904 aa8.62□□□□□ -1.03
LINC00458-201ENST00000423442 RTEL1-TNFRSF6BF6WH68 1400 aa8.62□□□□□ -1.03
LINC00458-201ENST00000423442 PTPRAP18433 802 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 IRAK1P51617 712 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 GP2P55259 537 aaKnown RBP8.61□□□□□ -1.03
LINC00458-201ENST00000423442 UVSSAQ2YD98 709 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 ATCAYQ86WG3 371 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 MYRFLQ96LU7 910 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 ELP3Q9H9T3 547 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 CNTN3Q9P232 1028 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 FAM135BQ49AJ0 1406 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 TIAM1Q13009 1591 aa8.61□□□□□ -1.03
LINC00458-201ENST00000423442 ACPPP15309 386 aa8.6□□□□□ -1.03
LINC00458-201ENST00000423442 RNF43Q68DV7 783 aa8.6□□□□□ -1.03
LINC00458-201ENST00000423442 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
LINC00458-201ENST00000423442 ADAM19Q9H013 955 aa8.6□□□□□ -1.03
LINC00458-201ENST00000423442 SEC31BQ9NQW1 1179 aa8.6□□□□□ -1.03
LINC00458-201ENST00000423442 NCOA2Q15596 1464 aa8.59□□□□□ -1.03
LINC00458-201ENST00000423442 LRRC9Q6ZRR7 1453 aa8.59□□□□□ -1.03
LINC00458-201ENST00000423442 PRR19A6NJB7 356 aa8.59□□□□□ -1.03
LINC00458-201ENST00000423442 ATG7O95352 703 aa8.59□□□□□ -1.03
LINC00458-201ENST00000423442 ABTB2Q8N961 1025 aa8.59□□□□□ -1.03
LINC00458-201ENST00000423442 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
LINC00458-201ENST00000423442 MAP3K1Q13233 1512 aa8.59□□□□□ -1.03
LINC00458-201ENST00000423442 UBR1Q8IWV7 1749 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 TRPA1O75762 1119 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 SPINK2P20155 84 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 LTKP29376 864 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
LINC00458-201ENST00000423442 ZNF438Q7Z4V0 828 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 TXNDC2Q86VQ3 553 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 FAM20CQ8IXL6 584 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
LINC00458-201ENST00000423442 DBNDD2Q9BQY9 259 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 ROBO1Q9Y6N7 1651 aa8.58□□□□□ -1.04
LINC00458-201ENST00000423442 SCAF11Q99590 1463 aaKnown RBP8.57□□□□□ -1.04
LINC00458-201ENST00000423442 CFAP65Q6ZU64 1925 aaKnown RBP8.57□□□□□ -1.04
LINC00458-201ENST00000423442 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 H3BRJ5 948 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 BMP3P12645 472 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 TAL1P17542 331 aaPredicted RBP8.57□□□□□ -1.04
LINC00458-201ENST00000423442 PREPP48147 710 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 NLRP12P59046 1061 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 SALL4Q9UJQ4 1053 aa8.57□□□□□ -1.04
LINC00458-201ENST00000423442 NFKBIEO00221 500 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
LINC00458-201ENST00000423442 YBX3P16989 372 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC00458-201ENST00000423442 GRIK1P39086 918 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
LINC00458-201ENST00000423442 BEND4Q6ZU67 534 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 C1orf127Q8N9H9 656 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 SHKBP1Q8TBC3 707 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 SLC7A3Q8WY07 619 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 HHIPQ96QV1 700 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 TMEM94Q12767 1356 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 ERVK-7P63135 1459 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 CCDC141Q6ZP82 1450 aa8.56□□□□□ -1.04
LINC00458-201ENST00000423442 ABCC3O15438 1527 aa8.55□□□□□ -1.04
LINC00458-201ENST00000423442 CABP4P57796 275 aa8.55□□□□□ -1.04
LINC00458-201ENST00000423442 HGSNATQ68CP4 663 aa8.55□□□□□ -1.04
LINC00458-201ENST00000423442 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.55□□□□□ -1.04
LINC00458-201ENST00000423442 MYOM3Q5VTT5 1437 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 ARHGAP23Q9P227 1491 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 A6NHS1 94 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 CES1P23141 567 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 FAM50AQ14320 339 aaKnown RBP8.54□□□□□ -1.04
LINC00458-201ENST00000423442 DTX1Q86Y01 620 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 EDEM1Q92611 657 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 WNT8BQ93098 351 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 RNF208Q9H0X6 261 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 GGNBP2Q9H3C7 697 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 DZANK1Q9NVP4 752 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 PHLPP1O60346 1717 aa8.54□□□□□ -1.04
LINC00458-201ENST00000423442 SLIT1O75093 1534 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms