RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
ECHDC3-203ENST00000422887 RRAGCQ9HB90 399 aa12.05□□□□□ -0.48
ECHDC3-203ENST00000422887 DAGLAQ9Y4D2 1042 aa12.05□□□□□ -0.48
ECHDC3-203ENST00000422887 PTPRFP10586 1907 aa12.05□□□□□ -0.48
ECHDC3-203ENST00000422887 PITPNM2Q9BZ72 1349 aa12.05□□□□□ -0.48
ECHDC3-203ENST00000422887 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 GPR75-ASB3A0A0A6YYF3 556 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 WNT10BO00744 389 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 CYP7A1P22680 504 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 TBC1D10BQ4KMP7 808 aaPredicted RBP12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 SAMD7Q7Z3H4 446 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 LDHDQ86WU2 507 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 TRPM4Q8TD43 1214 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 APPBP2Q92624 585 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 RILPL2Q969X0 211 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 ZNF532Q9HCE3 1301 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 PCNTO95613 3336 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 THSD7BQ9C0I4 1608 aa12.04□□□□□ -0.48
ECHDC3-203ENST00000422887 TCRBV5S4A2TA0A5A2 114 aa12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 BTDP43251 543 aa12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 HIRAP54198 1017 aaPredicted RBP12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 PPP4CP60510 307 aa12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 TNFAIP1Q13829 316 aa12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 SPDYE2Q495Y8 402 aa12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 FKBP1CQ5VVH2 108 aa12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 APOBEC3HQ6NTF7 200 aaKnown RBP12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 APOBEC3FQ8IUX4 373 aaKnown RBP12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 PGAP2Q9UHJ9 254 aa12.03□□□□□ -0.48
ECHDC3-203ENST00000422887 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 SDSP20132 328 aa12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 PRMT6Q96LA8 375 aaPredicted RBP12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 DIAPH3Q9NSV4 1193 aa12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 GGA3Q9NZ52 723 aa12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 PPP2R3BQ9Y5P8 575 aa12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 RAD50Q92878 1312 aa12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.49
ECHDC3-203ENST00000422887 MAGEB6P1A0A0J9YX57 407 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 TNNI2P48788 182 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 NBPF9Q3BBW0 867 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 ZMYM1Q5SVZ6 1142 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 AIDAQ96BJ3 306 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 HELLSQ9NRZ9 838 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 AATFQ9NY61 560 aaKnown RBP eCLIP12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 RPAP1Q9BWH6 1393 aaPredicted RBP12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 GREB1LQ9C091 1923 aaPredicted RBP12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 SSC5DA1L4H1 1573 aa12.01□□□□□ -0.49
ECHDC3-203ENST00000422887 GNAT2P19087 354 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 MFAP1P55081 439 aaKnown RBP12□□□□□ -0.49
ECHDC3-203ENST00000422887 RHBDL3P58872 404 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 C1QTNF8P60827 252 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 ANGEL2Q5VTE6 544 aaKnown RBP12□□□□□ -0.49
ECHDC3-203ENST00000422887 CDC42EP5Q6NZY7 148 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 CASC1Q6TDU7 716 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 FAM83AQ86UY5 434 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 SULF1Q8IWU6 871 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 RUFY2Q8WXA3 655 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 RIOK1Q9BRS2 568 aaKnown RBP12□□□□□ -0.49
ECHDC3-203ENST00000422887 IDI2Q9BXS1 227 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 CRNKL1Q9BZJ0 848 aaKnown RBP12□□□□□ -0.49
ECHDC3-203ENST00000422887 TDRD3Q9H7E2 651 aaKnown RBP12□□□□□ -0.49
ECHDC3-203ENST00000422887 ZNF70Q9UC06 446 aaPredicted RBP12□□□□□ -0.49
ECHDC3-203ENST00000422887 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 DOCK1Q14185 1865 aa12□□□□□ -0.49
ECHDC3-203ENST00000422887 ENTPD3O75355 529 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 TOMM70O94826 608 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 MBD4O95243 580 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 SKAP1Q86WV1 359 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 TEX11Q8IYF3 940 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 MIGA1Q8NAN2 632 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 SMC1BQ8NDV3 1235 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 VEZTQ9HBM0 779 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 USP40Q9NVE5 1235 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 CLEC11AQ9Y240 323 aa11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 ASTN2O75129 1339 aaPredicted RBP11.99□□□□□ -0.49
ECHDC3-203ENST00000422887 PASKQ96RG2 1323 aa11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 CLRN2A0PK11 232 aa11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 GPAA1O43292 621 aa11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 CDC45O75419 566 aa11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 MCMDC2Q4G0Z9 681 aa11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 OSBP2Q969R2 916 aa11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 DDRGK1Q96HY6 314 aa11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 PUS7LQ9H0K6 701 aaKnown RBP11.98□□□□□ -0.49
ECHDC3-203ENST00000422887 ATRNL1Q5VV63 1379 aa11.97□□□□□ -0.49
ECHDC3-203ENST00000422887 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
ECHDC3-203ENST00000422887 A0A0D9SFI3 127 aa11.97□□□□□ -0.49
ECHDC3-203ENST00000422887 WDHD1O75717 1129 aaPredicted RBP11.97□□□□□ -0.49
ECHDC3-203ENST00000422887 CHMLP26374 656 aa11.97□□□□□ -0.49
ECHDC3-203ENST00000422887 FSTL1Q12841 308 aa11.97□□□□□ -0.49
ECHDC3-203ENST00000422887 NMIQ13287 307 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms