RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 R3HDMLQ9H3Y0 253 aa26.95■■□□□ 1.9
TRAF4-204ENST00000422344 NOP58Q9Y2X3 529 aaKnown RBP26.95■■□□□ 1.9
TRAF4-204ENST00000422344 SSC5DA1L4H1 1573 aa26.94■■□□□ 1.9
TRAF4-204ENST00000422344 CACNB3P54284 484 aa26.94■■□□□ 1.9
TRAF4-204ENST00000422344 DIXDC1Q155Q3 683 aa26.94■■□□□ 1.9
TRAF4-204ENST00000422344 TNNI3KQ59H18 835 aa26.94■■□□□ 1.9
TRAF4-204ENST00000422344 DZIP1Q86YF9 867 aaKnown RBP26.94■■□□□ 1.9
TRAF4-204ENST00000422344 FPGT-TNNI3KV9GXZ4 949 aa26.94■■□□□ 1.9
TRAF4-204ENST00000422344 FKTNO75072 461 aa26.93■■□□□ 1.9
TRAF4-204ENST00000422344 UQCRFS1P1P0C7P4 283 aa26.93■■□□□ 1.9
TRAF4-204ENST00000422344 IREB2P48200 963 aaKnown RBP26.93■■□□□ 1.9
TRAF4-204ENST00000422344 FBXO46Q6PJ61 603 aaPredicted RBP26.93■■□□□ 1.9
TRAF4-204ENST00000422344 TMEM39BQ9GZU3 492 aa26.93■■□□□ 1.9
TRAF4-204ENST00000422344 DAGLAQ9Y4D2 1042 aa26.93■■□□□ 1.9
TRAF4-204ENST00000422344 SLF2Q8IX21 1173 aa26.92■■□□□ 1.9
TRAF4-204ENST00000422344 SPATA5Q8NB90 893 aa26.92■■□□□ 1.9
TRAF4-204ENST00000422344 SLC10A4Q96EP9 437 aa26.92■■□□□ 1.9
TRAF4-204ENST00000422344 CFHR5Q9BXR6 569 aa26.92■■□□□ 1.9
TRAF4-204ENST00000422344 ARID4AP29374 1257 aaPredicted RBP26.91■■□□□ 1.9
TRAF4-204ENST00000422344 PDE3AQ14432 1141 aa26.91■■□□□ 1.9
TRAF4-204ENST00000422344 MAP3K11Q16584 847 aa26.91■■□□□ 1.9
TRAF4-204ENST00000422344 CCDC158Q5M9N0 1113 aa26.91■■□□□ 1.9
TRAF4-204ENST00000422344 TTC39AQ5SRH9 613 aa26.91■■□□□ 1.9
TRAF4-204ENST00000422344 FKBP1CQ5VVH2 108 aa26.91■■□□□ 1.9
TRAF4-204ENST00000422344 ERC1Q8IUD2 1116 aa26.91■■□□□ 1.9
TRAF4-204ENST00000422344 RPAP2Q8IXW5 612 aaPredicted RBP26.91■■□□□ 1.9
TRAF4-204ENST00000422344 HMG20BQ9P0W2 317 aa26.91■■□□□ 1.9
TRAF4-204ENST00000422344 HMMRO75330 724 aa26.9■■□□□ 1.9
TRAF4-204ENST00000422344 HSP90AB4PQ58FF6 505 aa26.9■■□□□ 1.9
TRAF4-204ENST00000422344 ERICH6Q7L0X2 663 aa26.9■■□□□ 1.9
TRAF4-204ENST00000422344 FAM83AQ86UY5 434 aa26.9■■□□□ 1.9
TRAF4-204ENST00000422344 YTHDC1Q96MU7 727 aaKnown RBP26.9■■□□□ 1.9
TRAF4-204ENST00000422344 TEPSINQ96N21 525 aa26.9■■□□□ 1.9
TRAF4-204ENST00000422344 ZBTB40Q9NUA8 1239 aa26.9■■□□□ 1.9
TRAF4-204ENST00000422344 UNCXA6NJT0 531 aa26.89■■□□□ 1.9
TRAF4-204ENST00000422344 ALDH1A1P00352 501 aa26.89■■□□□ 1.9
TRAF4-204ENST00000422344 PRPF38BQ5VTL8 546 aaKnown RBP26.89■■□□□ 1.9
TRAF4-204ENST00000422344 DBNDD2Q9BQY9 259 aa26.89■■□□□ 1.9
TRAF4-204ENST00000422344 EXOC6BQ9Y2D4 811 aa26.89■■□□□ 1.9
TRAF4-204ENST00000422344 MANSC4A6NHS7 340 aaPredicted RBP26.88■■□□□ 1.89
TRAF4-204ENST00000422344 CDC42EP5Q6NZY7 148 aa26.88■■□□□ 1.89
TRAF4-204ENST00000422344 HOOK2Q96ED9 719 aa26.88■■□□□ 1.89
TRAF4-204ENST00000422344 CLMNQ96JQ2 1002 aa26.88■■□□□ 1.89
TRAF4-204ENST00000422344 USP2O75604 605 aaPredicted RBP26.87■■□□□ 1.89
TRAF4-204ENST00000422344 C20orf194Q5TEA3 1177 aa26.87■■□□□ 1.89
TRAF4-204ENST00000422344 PI16Q6UXB8 463 aa26.87■■□□□ 1.89
TRAF4-204ENST00000422344 CDAN1Q8IWY9 1227 aa26.87■■□□□ 1.89
TRAF4-204ENST00000422344 ANKRD13AQ8IZ07 590 aa26.87■■□□□ 1.89
TRAF4-204ENST00000422344 USP40Q9NVE5 1235 aa26.87■■□□□ 1.89
TRAF4-204ENST00000422344 MCAMP43121 646 aa26.86■■□□□ 1.89
TRAF4-204ENST00000422344 INHBEP58166 350 aa26.86■■□□□ 1.89
TRAF4-204ENST00000422344 IFNL1Q8IU54 200 aa26.86■■□□□ 1.89
TRAF4-204ENST00000422344 WNK4Q96J92 1243 aa26.86■■□□□ 1.89
TRAF4-204ENST00000422344 PCDH10Q9P2E7 1040 aa26.86■■□□□ 1.89
TRAF4-204ENST00000422344 ZBTB48P10074 688 aaPredicted RBP26.85■■□□□ 1.89
TRAF4-204ENST00000422344 GSTO1P78417 241 aa26.85■■□□□ 1.89
TRAF4-204ENST00000422344 RAI14Q9P0K7 980 aa26.85■■□□□ 1.89
TRAF4-204ENST00000422344 GAKO14976 1311 aa26.85■■□□□ 1.89
TRAF4-204ENST00000422344 RPAP1Q9BWH6 1393 aaPredicted RBP26.84■■□□□ 1.89
TRAF4-204ENST00000422344 MECOMQ03112 1051 aa26.84■■□□□ 1.89
TRAF4-204ENST00000422344 TBC1D9Q6ZT07 1266 aa26.84■■□□□ 1.89
TRAF4-204ENST00000422344 FAM151AQ8WW52 585 aa26.84■■□□□ 1.89
TRAF4-204ENST00000422344 CCDC8Q9H0W5 538 aaPredicted RBP26.84■■□□□ 1.89
TRAF4-204ENST00000422344 LRP2BPQ9P2M1 347 aa26.84■■□□□ 1.89
TRAF4-204ENST00000422344 DBNLQ9UJU6 430 aaKnown RBP26.84■■□□□ 1.89
TRAF4-204ENST00000422344 MYH2Q9UKX2 1941 aa26.84■■□□□ 1.89
TRAF4-204ENST00000422344 IGF2BP3O00425 579 aaKnown RBP eCLIP26.83■■□□□ 1.89
TRAF4-204ENST00000422344 LDHCP07864 332 aa26.83■■□□□ 1.89
TRAF4-204ENST00000422344 TCP10Q12799 353 aa26.83■■□□□ 1.89
TRAF4-204ENST00000422344 EAF2Q96CJ1 260 aaPredicted RBP26.83■■□□□ 1.89
TRAF4-204ENST00000422344 SNRKQ9NRH2 765 aa26.83■■□□□ 1.89
TRAF4-204ENST00000422344 MROH7-TTC4A0A0A0MT08 1334 aa26.83■■□□□ 1.89
TRAF4-204ENST00000422344 DCAF15Q66K64 600 aa26.82■■□□□ 1.88
TRAF4-204ENST00000422344 AACSQ86V21 672 aa26.82■■□□□ 1.88
TRAF4-204ENST00000422344 FAM163AQ96GL9 167 aaPredicted RBP26.82■■□□□ 1.88
TRAF4-204ENST00000422344 TLR7Q9NYK1 1049 aaKnown RBP26.82■■□□□ 1.88
TRAF4-204ENST00000422344 TRIM17Q9Y577 477 aa26.82■■□□□ 1.88
TRAF4-204ENST00000422344 APBB1O00213 710 aa26.81■■□□□ 1.88
TRAF4-204ENST00000422344 BTDP43251 543 aa26.81■■□□□ 1.88
TRAF4-204ENST00000422344 NFIAQ12857 509 aa26.81■■□□□ 1.88
TRAF4-204ENST00000422344 RHPN1Q8TCX5 695 aa26.81■■□□□ 1.88
TRAF4-204ENST00000422344 ZNF512BQ96KM6 892 aaPredicted RBP26.81■■□□□ 1.88
TRAF4-204ENST00000422344 CSADQ9Y600 493 aa26.81■■□□□ 1.88
TRAF4-204ENST00000422344 MAP3K9P80192 1104 aa26.8■■□□□ 1.88
TRAF4-204ENST00000422344 SIRT2Q8IXJ6 389 aa26.8■■□□□ 1.88
TRAF4-204ENST00000422344 ELP3Q9H9T3 547 aa26.8■■□□□ 1.88
TRAF4-204ENST00000422344 IL1RAPL2Q9NP60 686 aa26.8■■□□□ 1.88
TRAF4-204ENST00000422344 HTTP42858 3142 aa26.8■■□□□ 1.88
TRAF4-204ENST00000422344 OTOP1Q7RTM1 612 aa26.79■■□□□ 1.88
TRAF4-204ENST00000422344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.79■■□□□ 1.881e-6■□□□□ 8.2
TRAF4-204ENST00000422344 NSUN4Q96CB9 384 aaKnown RBP26.79■■□□□ 1.88
TRAF4-204ENST00000422344 KIF1BPQ96EK5 621 aa26.79■■□□□ 1.88
TRAF4-204ENST00000422344 OTOFQ9HC10 1997 aa26.78■■□□□ 1.88
TRAF4-204ENST00000422344 GJA5P36382 358 aa26.78■■□□□ 1.88
TRAF4-204ENST00000422344 CLASRPQ8N2M8 674 aaKnown RBP26.78■■□□□ 1.88
TRAF4-204ENST00000422344 WRNIP1Q96S55 665 aa26.78■■□□□ 1.88
TRAF4-204ENST00000422344 NOL10Q9BSC4 688 aaKnown RBP26.78■■□□□ 1.88
TRAF4-204ENST00000422344 IDI2Q9BXS1 227 aa26.78■■□□□ 1.88
TRAF4-204ENST00000422344 FAM198AQ9UFP1 575 aa26.78■■□□□ 1.88
TRAF4-204ENST00000422344 LAMB1P07942 1786 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms