RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 CTSWP56202 376 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 CTDSPL2Q05D32 466 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 ALDH1L2Q3SY69 923 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 BEND3Q5T5X7 828 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 ANKRD18AQ8IVF6 992 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 NIM1KQ8IY84 436 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 TTLL11Q8NHH1 800 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 SSH1Q8WYL5 1049 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 CCDC85AQ96PX6 553 aaPredicted RBP9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 CDC5LQ99459 802 aaKnown RBP9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 RTFDC1Q9BY42 306 aaPredicted RBP9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 SEC31BQ9NQW1 1179 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 C9orf78Q9NZ63 289 aaPredicted RBP9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 ARFGEF2Q9Y6D5 1785 aa9.57□□□□□ -0.88
AC012560.1-202ENST00000421324 CACNA1SQ13698 1873 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 FZD9O00144 591 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 ALDH1L1O75891 902 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 HNRNPUQ00839 825 aaKnown RBP eCLIP9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 IL27Q8NEV9 243 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 AAASQ9NRG9 546 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 SMC4Q9NTJ3 1288 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 ANKIB1Q9P2G1 1089 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 PTPRCP08575 1304 aa9.56□□□□□ -0.88
AC012560.1-202ENST00000421324 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 AOC3Q16853 763 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 WASHC4Q2M389 1173 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 SLC51AQ86UW1 340 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 GPC2Q8N158 579 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 EYA3Q99504 573 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 PLA2G12BQ9BX93 195 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 BCL2L13Q9BXK5 485 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 ZNRF3Q9ULT6 936 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 CACNA1FO60840 1977 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 CCDC88AQ3V6T2 1871 aa9.55□□□□□ -0.88
AC012560.1-202ENST00000421324 POTECB2RU33 542 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 GRM8O00222 908 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 IGHMBP2P38935 993 aaKnown RBP9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 GPSM2P81274 684 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 FSTL1Q12841 308 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 SMC1BQ8NDV3 1235 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 ZC3H12CQ9C0D7 883 aaKnown RBP9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 GREM2Q9H772 168 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 SNED1Q8TER0 1413 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 ZNF541Q9H0D2 1346 aa9.54□□□□□ -0.88
AC012560.1-202ENST00000421324 ANKRD18BA2A2Z9 1011 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 ST8SIA5O15466 376 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 CSF1RP07333 972 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 HSPA6P17066 643 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 ITGA6P23229 1130 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 CASP7P55210 303 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 IFIT5Q13325 482 aaKnown RBP9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 TNIP1Q15025 636 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 TBC1D16Q8TBP0 767 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 MPHOSPH8Q99549 860 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 BSDC1Q9NW68 430 aaPredicted RBP9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 POLLQ9UGP5 575 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 HACL1Q9UJ83 578 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 GGA1Q9UJY5 639 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 CHMP3Q9Y3E7 222 aa9.53□□□□□ -0.88
AC012560.1-202ENST00000421324 RTL9Q8NET4 1388 aa9.52□□□□□ -0.88
AC012560.1-202ENST00000421324 UFL1O94874 794 aa9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 PRKCSHP14314 528 aaPredicted RBP9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 ATP2B4P23634 1241 aa9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 VARSP26640 1264 aaKnown RBP9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 CCDC57Q2TAC2 916 aa9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 LMBR1LQ6UX01 489 aa9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 DDX60Q8IY21 1712 aaKnown RBP9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 FOXJ1Q92949 421 aa9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 DICER1Q9UPY3 1922 aaKnown RBP9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 LAMB2P55268 1798 aa9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 XDHP47989 1333 aa9.52□□□□□ -0.89
AC012560.1-202ENST00000421324 IPO8O15397 1037 aaKnown RBP9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 EPHX2P34913 555 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 RARSP54136 660 aaKnown RBP9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 FOXO4P98177 505 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 CXCL9Q07325 125 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 CTC1Q2NKJ3 1217 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 EAPPQ56P03 285 aaPredicted RBP9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 C4orf48Q5BLP8 95 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 CIAPIN1Q6FI81 312 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 HPS1Q92902 700 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 API5Q9BZZ5 524 aaKnown RBP9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 ANKRD2Q9GZV1 360 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 TAF1DQ9H5J8 278 aaPredicted RBP9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 MINPP1Q9UNW1 487 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
AC012560.1-202ENST00000421324 RAD17O75943 681 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 ALDH1A1P00352 501 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms