RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 ANKRD2Q9GZV1 360 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
RFX3-205ENST00000420720 MYO3BQ8WXR4 1341 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 EVI5O60447 810 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 KCNJ4P48050 445 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 CHRNDQ07001 517 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 PRKG1Q13976 671 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 LINS1Q8NG48 757 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 SHISA4Q96DD7 197 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 ADAM33Q9BZ11 813 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 MYH16Q9H6N6 1097 aa9.07□□□□□ -0.96
RFX3-205ENST00000420720 IL16Q14005 1332 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 ZBTB7BO15156 539 aaPredicted RBP9.06□□□□□ -0.96
RFX3-205ENST00000420720 VAMP4O75379 141 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 TAF5LO75529 589 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 NF2P35240 595 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 EXOSC9Q06265 439 aaKnown RBP9.06□□□□□ -0.96
RFX3-205ENST00000420720 HELBQ8NG08 1087 aaPredicted RBP9.06□□□□□ -0.96
RFX3-205ENST00000420720 CD99L2Q8TCZ2 262 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 CD209Q9NNX6 404 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.06□□□□□ -0.96
RFX3-205ENST00000420720 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 SCN9AQ15858 1988 aa9.06□□□□□ -0.96
RFX3-205ENST00000420720 FANCIQ9NVI1 1328 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 F6X3S4 739 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 MYCP01106 439 aaPredicted RBP9.05□□□□□ -0.96
RFX3-205ENST00000420720 FOXO4P98177 505 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 PTPN12Q05209 780 aaKnown RBP9.05□□□□□ -0.96
RFX3-205ENST00000420720 ARMC9Q7Z3E5 817 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 APOBEC3FQ8IUX4 373 aaKnown RBP9.05□□□□□ -0.96
RFX3-205ENST00000420720 ZBED2Q9BTP6 218 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 MRS2Q9HD23 443 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 STAP2Q9UGK3 403 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 FZD1Q9UP38 647 aa9.05□□□□□ -0.96
RFX3-205ENST00000420720 BHMG1C9JSJ3 638 aaPredicted RBP9.04□□□□□ -0.96
RFX3-205ENST00000420720 F8W031 263 aaPredicted RBP9.04□□□□□ -0.96
RFX3-205ENST00000420720 PLIN1O60240 522 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 MMP14P50281 582 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 IFIT5Q13325 482 aaKnown RBP9.04□□□□□ -0.96
RFX3-205ENST00000420720 DLGAP5Q15398 846 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 SLC4A8Q2Y0W8 1093 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 UBE2Q1Q7Z7E8 422 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 WDR63Q8IWG1 891 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 CERS5Q8N5B7 392 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 ZBED3Q96IU2 234 aaPredicted RBP9.04□□□□□ -0.96
RFX3-205ENST00000420720 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
RFX3-205ENST00000420720 SLC4A5Q9BY07 1137 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 ANGEL1Q9UNK9 670 aaKnown RBP9.04□□□□□ -0.96
RFX3-205ENST00000420720 JAG2Q9Y219 1238 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 PCDHAC2Q9Y5I4 1007 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 RPTORQ8N122 1335 aa9.04□□□□□ -0.96
RFX3-205ENST00000420720 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
RFX3-205ENST00000420720 EPHA10Q5JZY3 1008 aa9.03□□□□□ -0.96
RFX3-205ENST00000420720 GUCD1Q96NT3 240 aa9.03□□□□□ -0.96
RFX3-205ENST00000420720 DEFB129Q9H1M3 183 aa9.03□□□□□ -0.96
RFX3-205ENST00000420720 IRS2Q9Y4H2 1338 aa9.03□□□□□ -0.96
RFX3-205ENST00000420720 CLRN2A0PK11 232 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 ANP32CO43423 234 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 SREBF2Q12772 1141 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 CCDC57Q2TAC2 916 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 CFAP100Q494V2 611 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 LDHAL6AQ6ZMR3 332 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 C15orf52Q6ZUT6 534 aaKnown RBP9.02□□□□□ -0.97
RFX3-205ENST00000420720 ZNF804AQ7Z570 1209 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 ERO1AQ96HE7 468 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 EFCC1Q9HA90 598 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 PTCH2Q9Y6C5 1203 aa9.02□□□□□ -0.97
RFX3-205ENST00000420720 IL1R1P14778 569 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 PTPREP23469 700 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 RBM5P52756 815 aaKnown RBP eCLIP9.01□□□□□ -0.97
RFX3-205ENST00000420720 SLC9C1Q4G0N8 1177 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 SLC4A10Q6U841 1118 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 MTMR14Q8NCE2 650 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 ZDHHC16Q969W1 377 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 CLMNQ96JQ2 1002 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
RFX3-205ENST00000420720 VEZTQ9HBM0 779 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 CNNM1Q9NRU3 951 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 C9orf78Q9NZ63 289 aaPredicted RBP9.01□□□□□ -0.97
RFX3-205ENST00000420720 AOX1Q06278 1338 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 SYNGAP1Q96PV0 1343 aa9.01□□□□□ -0.97
RFX3-205ENST00000420720 GRM8O00222 908 aa9□□□□□ -0.97
RFX3-205ENST00000420720 IGF2BP3O00425 579 aaKnown RBP eCLIP9□□□□□ -0.97
RFX3-205ENST00000420720 MYO1BO43795 1136 aa9□□□□□ -0.97
RFX3-205ENST00000420720 FKBP1AP62942 108 aaKnown RBP9□□□□□ -0.97
RFX3-205ENST00000420720 MAP3K12Q12852 859 aa9□□□□□ -0.97
RFX3-205ENST00000420720 MAP3K11Q16584 847 aa9□□□□□ -0.97
RFX3-205ENST00000420720 NBPF12Q5TAG4 269 aaPredicted RBP9□□□□□ -0.97
RFX3-205ENST00000420720 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
RFX3-205ENST00000420720 SH3TC2Q8TF17 1288 aa9□□□□□ -0.97
RFX3-205ENST00000420720 PUS3Q9BZE2 481 aaKnown RBP9□□□□□ -0.97
RFX3-205ENST00000420720 PCDHGA10Q9Y5H3 936 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms