RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 CEP170BQ9Y4F5 1589 aaPredicted RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 UBTFL1P0CB47 393 aaPredicted RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 SFPQP23246 707 aaKnown RBP eCLIP7.05□□□□□ -1.282e-6■■■□□ 14.7
CHD2-202ENST00000420239 MTX1Q13505 466 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 LONRF2Q1L5Z9 754 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 AXDND1Q5T1B0 1012 aaPredicted RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 CREB3L3Q68CJ9 461 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 PPP1R42Q7Z4L9 355 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 GPR161Q8N6U8 529 aaKnown RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 ERCC4Q92889 916 aaPredicted RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 FTOQ9C0B1 505 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHD2-202ENST00000420239 IFNKQ9P0W0 207 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 RCOR1Q9UKL0 485 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 RICTORQ6R327 1708 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 DIP2AQ14689 1571 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 NPHP4O75161 1426 aaPredicted RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 VWA3AA6NCI4 1184 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 HIP1O00291 1037 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 JAK2O60674 1132 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 N4BP1O75113 896 aaKnown RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 SURF6O75683 361 aaKnown RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 SMC2O95347 1197 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 LMOD1P29536 600 aaPredicted RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 GSCP56915 257 aaPredicted RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 PPP2R3AQ06190 1150 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 KCNA1Q09470 495 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 ATL3Q6DD88 541 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 MCTP2Q6DN12 878 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 LEKR1Q6ZMV7 388 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 CCAR1Q8IX12 1150 aaKnown RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 CEP57L1Q8IYX8 460 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 PRR7Q8TB68 274 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 NUDT16Q96DE0 195 aaKnown RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 TCEANC2Q96MN5 208 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 KCNK17Q96T54 332 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 BPIFA3Q9BQP9 254 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 ARFGAP3Q9NP61 516 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 ANO10Q9NW15 660 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 VPS18Q9P253 973 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 CEP83Q9Y592 693 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 ABCC6O95255 1503 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 SLC27A2O14975 620 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 APPP05067 770 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 CCDC172P0C7W6 258 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 ZKSCAN1P17029 563 aaPredicted RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 RPS6KB1P23443 525 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 ADD1P35611 737 aaKnown RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 PSME1Q06323 249 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 APOBRQ0VD83 1088 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 TOB2Q14106 344 aaPredicted RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 LRRC31Q6UY01 552 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 WAPLQ7Z5K2 1190 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 ENGASEQ8NFI3 743 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 PPM1EQ8WY54 764 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 EVI5LQ96CN4 794 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 WDR24Q96S15 920 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 CXorf56Q9H5V9 222 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 PDE11AQ9HCR9 933 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 KIAA1468Q9P260 1216 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 CFAP45Q9UL16 551 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 AKAP2Q9Y2D5 859 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 RBM8AQ9Y5S9 174 aaKnown RBP7.04□□□□□ -1.28
CHD2-202ENST00000420239 MRFAP1Q9Y605 127 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 TAF6LQ9Y6J9 622 aa7.04□□□□□ -1.28
CHD2-202ENST00000420239 MED1Q15648 1581 aaPredicted RBP7.03□□□□□ -1.28
CHD2-202ENST00000420239 RIMS1Q86UR5 1692 aaKnown RBP7.03□□□□□ -1.28
CHD2-202ENST00000420239 CCP110O43303 1012 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 GOLGA8FQ08AF8 430 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 GOLGA8DPQ0D2H9 430 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 MTHFSDQ2M296 383 aaKnown RBP7.03□□□□□ -1.28
CHD2-202ENST00000420239 MMS22LQ6ZRQ5 1243 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 BRF1Q92994 677 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 ZNF622Q969S3 477 aaKnown RBP eCLIP7.03□□□□□ -1.282e-7■■■□□ 15.4
CHD2-202ENST00000420239 KIFC2Q96AC6 838 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 DDX11Q96FC9 970 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 PLEKHA4Q9H4M7 779 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 FAN1Q9Y2M0 1017 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 A2ML1A8K2U0 1454 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 CEBPZQ03701 1054 aaKnown RBP7.03□□□□□ -1.28
CHD2-202ENST00000420239 FUT2Q10981 343 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 STK3Q13188 491 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 GNL2Q13823 731 aaKnown RBP7.03□□□□□ -1.28
CHD2-202ENST00000420239 DPCR1Q3MIW9 517 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 MSL3Q8N5Y2 521 aaKnown RBP7.03□□□□□ -1.28
CHD2-202ENST00000420239 SMARCC2Q8TAQ2 1214 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 RABGGTAQ92696 567 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 KAT2BQ92831 832 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 DEF6Q9H4E7 631 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 ECHDC1Q9NTX5 307 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 DONSONQ9NYP3 566 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 MIS18AQ9NYP9 233 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 HMG20BQ9P0W2 317 aa7.03□□□□□ -1.28
CHD2-202ENST00000420239 NEDD4P46934 1319 aa7.02□□□□□ -1.28
CHD2-202ENST00000420239 MED23Q9ULK4 1368 aa7.02□□□□□ -1.28
CHD2-202ENST00000420239 PATL2C9JE40 543 aaKnown RBP7.02□□□□□ -1.29
CHD2-202ENST00000420239 C6orf229H3BNL8 230 aa7.02□□□□□ -1.29
CHD2-202ENST00000420239 NCAPHQ15003 741 aa7.02□□□□□ -1.29
CHD2-202ENST00000420239 USPL1Q5W0Q7 1092 aa7.02□□□□□ -1.29
CHD2-202ENST00000420239 BLOC1S2Q6QNY1 142 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms