RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
RFC1-203ENST00000418436 RAB11FIP3O75154 756 aa12.93□□□□□ -0.34
RFC1-203ENST00000418436 ARID4AP29374 1257 aaPredicted RBP12.93□□□□□ -0.34
RFC1-203ENST00000418436 HDLBPQ00341 1268 aaKnown RBP12.93□□□□□ -0.34
RFC1-203ENST00000418436 RASGRF1Q13972 1273 aa12.93□□□□□ -0.34
RFC1-203ENST00000418436 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
RFC1-203ENST00000418436 DCPSQ96C86 337 aaKnown RBP12.93□□□□□ -0.34
RFC1-203ENST00000418436 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
RFC1-203ENST00000418436 DBNDD2Q9BQY9 259 aa12.93□□□□□ -0.34
RFC1-203ENST00000418436 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
RFC1-203ENST00000418436 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
RFC1-203ENST00000418436 SERPINA10Q9UK55 444 aa12.93□□□□□ -0.34
RFC1-203ENST00000418436 TRAF5O00463 557 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.34
RFC1-203ENST00000418436 AAMPQ13685 434 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 DLGAP5Q15398 846 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 CFAP100Q494V2 611 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 GORABQ5T7V8 394 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 ANGEL2Q5VTE6 544 aaKnown RBP12.92□□□□□ -0.34
RFC1-203ENST00000418436 ZNF512BQ96KM6 892 aaPredicted RBP12.92□□□□□ -0.34
RFC1-203ENST00000418436 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
RFC1-203ENST00000418436 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 DCTPP1Q9H773 170 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 GGA3Q9NZ52 723 aa12.92□□□□□ -0.34
RFC1-203ENST00000418436 DBNLQ9UJU6 430 aaKnown RBP12.92□□□□□ -0.34
RFC1-203ENST00000418436 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
RFC1-203ENST00000418436 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
RFC1-203ENST00000418436 KRT26Q7Z3Y9 468 aa12.91□□□□□ -0.34
RFC1-203ENST00000418436 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
RFC1-203ENST00000418436 CCDC8Q9H0W5 538 aaPredicted RBP12.91□□□□□ -0.34
RFC1-203ENST00000418436 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
RFC1-203ENST00000418436 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
RFC1-203ENST00000418436 PCDHAC2Q9Y5I4 1007 aa12.91□□□□□ -0.34
RFC1-203ENST00000418436 MAST3O60307 1309 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 MCAMP43121 646 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 CRKP46108 304 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 CST9Q5W186 159 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
RFC1-203ENST00000418436 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
RFC1-203ENST00000418436 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
RFC1-203ENST00000418436 MYH2Q9UKX2 1941 aa12.9□□□□□ -0.35
RFC1-203ENST00000418436 AOX1Q06278 1338 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 POTEB3A0JP26 581 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 ADM5C9JUS6 153 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 SLC34A2O95436 690 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 PRDX5P30044 214 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 HTRA3P83110 453 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 POTEBQ6S5H4 581 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 DLK2Q6UY11 383 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 AACSQ86V21 672 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 CLASRPQ8N2M8 674 aaKnown RBP12.89□□□□□ -0.35
RFC1-203ENST00000418436 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 TEKT1Q969V4 418 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
RFC1-203ENST00000418436 MYO5AQ9Y4I1 1855 aaKnown RBP12.89□□□□□ -0.35
RFC1-203ENST00000418436 APBB1O00213 710 aa12.88□□□□□ -0.35
RFC1-203ENST00000418436 LDHBP07195 334 aaKnown RBP12.88□□□□□ -0.35
RFC1-203ENST00000418436 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
RFC1-203ENST00000418436 FOXK1P85037 733 aa12.88□□□□□ -0.35
RFC1-203ENST00000418436 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
RFC1-203ENST00000418436 APOBEC3FQ8IUX4 373 aaKnown RBP12.88□□□□□ -0.35
RFC1-203ENST00000418436 EXOC6Q8TAG9 804 aa12.88□□□□□ -0.35
RFC1-203ENST00000418436 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
RFC1-203ENST00000418436 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
RFC1-203ENST00000418436 MYO1BO43795 1136 aa12.87□□□□□ -0.35
RFC1-203ENST00000418436 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
RFC1-203ENST00000418436 SPTY2D1Q68D10 685 aaPredicted RBP12.87□□□□□ -0.35
RFC1-203ENST00000418436 APOBEC3HQ6NTF7 200 aaKnown RBP12.87□□□□□ -0.35
RFC1-203ENST00000418436 CDCA5Q96FF9 252 aa12.87□□□□□ -0.35
RFC1-203ENST00000418436 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
RFC1-203ENST00000418436 DOCK2Q92608 1830 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 CELF2O95319 508 aaKnown RBP12.86□□□□□ -0.35
RFC1-203ENST00000418436 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
RFC1-203ENST00000418436 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
RFC1-203ENST00000418436 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 ARSIQ5FYB1 569 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 ZNF384Q8TF68 577 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
RFC1-203ENST00000418436 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
RFC1-203ENST00000418436 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 ZNF70Q9UC06 446 aaPredicted RBP12.86□□□□□ -0.35
RFC1-203ENST00000418436 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
RFC1-203ENST00000418436 DAGLAQ9Y4D2 1042 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 MAST2Q6P0Q8 1798 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 GAKO14976 1311 aa12.86□□□□□ -0.35
RFC1-203ENST00000418436 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
RFC1-203ENST00000418436 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
RFC1-203ENST00000418436 SMARCA5O60264 1052 aaPredicted RBP12.85□□□□□ -0.35
RFC1-203ENST00000418436 IGSF3O75054 1194 aa12.85□□□□□ -0.35
RFC1-203ENST00000418436 ZAP70P43403 619 aa12.85□□□□□ -0.35
RFC1-203ENST00000418436 MECOMQ03112 1051 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms