RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 NKD1Q969G9 470 aa7.88□□□□□ -1.15
RFC4-204ENST00000417876 PRDM6Q9NQX0 595 aa7.88□□□□□ -1.15
RFC4-204ENST00000417876 FAM177BA6PVY3 158 aa7.87□□□□□ -1.15
RFC4-204ENST00000417876 LRRC14Q15048 493 aa7.87□□□□□ -1.15
RFC4-204ENST00000417876 WFDC8Q8IUA0 241 aa7.87□□□□□ -1.15
RFC4-204ENST00000417876 ARMC5Q96C12 935 aa7.87□□□□□ -1.15
RFC4-204ENST00000417876 EMILIN2Q9BXX0 1053 aa7.87□□□□□ -1.15
RFC4-204ENST00000417876 LRRC3Q9BY71 257 aa7.87□□□□□ -1.15
RFC4-204ENST00000417876 LNPKQ9C0E8 428 aa7.87□□□□□ -1.15
RFC4-204ENST00000417876 ROBO2Q9HCK4 1378 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 DDX3YO15523 660 aaKnown RBP7.86□□□□□ -1.15
RFC4-204ENST00000417876 DEAF1O75398 565 aaPredicted RBP7.86□□□□□ -1.15
RFC4-204ENST00000417876 ETFBP38117 255 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 AP3B2Q13367 1082 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 KCNB2Q92953 911 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 WNT8BQ93098 351 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 WDR89Q96FK6 387 aaPredicted RBP7.86□□□□□ -1.15
RFC4-204ENST00000417876 SPATA32Q96LK8 384 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 CCDC86Q9H6F5 360 aaKnown RBP7.86□□□□□ -1.15
RFC4-204ENST00000417876 OSGEPQ9NPF4 335 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 LRRC4BQ9NT99 713 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 KCNK4Q9NYG8 393 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 MRVI1Q9Y6F6 885 aa7.86□□□□□ -1.15
RFC4-204ENST00000417876 ADAM11O75078 769 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 TRIM37O94972 964 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 DLGAP3O95886 979 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 MAOBP27338 520 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 MPP2Q14168 576 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 POU4F3Q15319 338 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 CCDC81Q6ZN84 652 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 ZNF408Q9H9D4 720 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 BRMS1Q9HCU9 246 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 PPT2Q9UMR5 302 aa7.85□□□□□ -1.15
RFC4-204ENST00000417876 ZNF862O60290 1169 aa7.84□□□□□ -1.15
RFC4-204ENST00000417876 LMNB1P20700 586 aa7.84□□□□□ -1.15
RFC4-204ENST00000417876 AMPD1P23109 780 aa7.84□□□□□ -1.15
RFC4-204ENST00000417876 DGKGP49619 791 aa7.84□□□□□ -1.15
RFC4-204ENST00000417876 REC114Q7Z4M0 266 aa7.84□□□□□ -1.15
RFC4-204ENST00000417876 PMFBP1Q8TBY8 1022 aa7.84□□□□□ -1.15
RFC4-204ENST00000417876 DDX54Q8TDD1 881 aaKnown RBP7.84□□□□□ -1.15
RFC4-204ENST00000417876 POLR3KQ9Y2Y1 108 aaPredicted RBP7.84□□□□□ -1.15
RFC4-204ENST00000417876 STK10O94804 968 aaKnown RBP7.83□□□□□ -1.16
RFC4-204ENST00000417876 CYP11A1P05108 521 aa7.83□□□□□ -1.16
RFC4-204ENST00000417876 ARL4DP49703 201 aa7.83□□□□□ -1.16
RFC4-204ENST00000417876 NLRP12P59046 1061 aa7.83□□□□□ -1.16
RFC4-204ENST00000417876 CLCQ05315 142 aa7.83□□□□□ -1.16
RFC4-204ENST00000417876 COL9A2Q14055 689 aaPredicted RBP7.83□□□□□ -1.16
RFC4-204ENST00000417876 INPP5AQ14642 412 aa7.83□□□□□ -1.16
RFC4-204ENST00000417876 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
RFC4-204ENST00000417876 ZNF385CQ66K41 422 aaPredicted RBP7.83□□□□□ -1.16
RFC4-204ENST00000417876 FAM117BQ6P1L5 589 aa7.83□□□□□ -1.16
RFC4-204ENST00000417876 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
RFC4-204ENST00000417876 SHDQ96IW2 340 aa7.83□□□□□ -1.16
RFC4-204ENST00000417876 GFRA2O00451 464 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 WIPF1O43516 503 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 SSBP05455 408 aaKnown RBP eCLIP7.82□□□□□ -1.16
RFC4-204ENST00000417876 LIG1P18858 919 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 RPL6Q02878 288 aaKnown RBP7.82□□□□□ -1.16
RFC4-204ENST00000417876 SUZ12Q15022 739 aaKnown RBP7.82□□□□□ -1.16
RFC4-204ENST00000417876 CCDC144BQ3MJ40 725 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 SCARA3Q6AZY7 606 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 KLHL23Q8NBE8 558 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 CORO1BQ9BR76 489 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 STK17AQ9UEE5 414 aa7.82□□□□□ -1.16
RFC4-204ENST00000417876 LOC100289279A0A1B0GTE1 492 aa7.81□□□□□ -1.16
RFC4-204ENST00000417876 MCM4P33991 863 aa7.81□□□□□ -1.16
RFC4-204ENST00000417876 CWF19L2Q2TBE0 894 aaKnown RBP7.81□□□□□ -1.16
RFC4-204ENST00000417876 GK5Q6ZS86 529 aa7.81□□□□□ -1.16
RFC4-204ENST00000417876 FAM169BQ8N8A8 192 aa7.81□□□□□ -1.16
RFC4-204ENST00000417876 TRIM11Q96F44 468 aa7.81□□□□□ -1.16
RFC4-204ENST00000417876 SRRTQ9BXP5 876 aaKnown RBP7.81□□□□□ -1.16
RFC4-204ENST00000417876 PCDHA4Q9UN74 947 aa7.81□□□□□ -1.16
RFC4-204ENST00000417876 GRIN3BO60391 1043 aa7.8□□□□□ -1.16
RFC4-204ENST00000417876 SNRPNP63162 240 aaKnown RBP7.8□□□□□ -1.16
RFC4-204ENST00000417876 GIMAP6Q6P9H5 292 aa7.8□□□□□ -1.16
RFC4-204ENST00000417876 LRFN4Q6PJG9 635 aa7.8□□□□□ -1.16
RFC4-204ENST00000417876 LINC00114Q6XXX2 140 aa7.8□□□□□ -1.16
RFC4-204ENST00000417876 REXO1Q8N1G1 1221 aaKnown RBP7.8□□□□□ -1.16
RFC4-204ENST00000417876 HIRIP3Q9BW71 556 aaPredicted RBP7.8□□□□□ -1.16
RFC4-204ENST00000417876 USP26Q9BXU7 913 aa7.8□□□□□ -1.16
RFC4-204ENST00000417876 PIF1Q9H611 641 aa7.8□□□□□ -1.16
RFC4-204ENST00000417876 KRT82Q9NSB4 513 aa7.8□□□□□ -1.16
RFC4-204ENST00000417876 KLF4O43474 513 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
RFC4-204ENST00000417876 TRAPPC3LQ5T215 181 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 UBASH3BQ8TF42 649 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 CPLX3Q8WVH0 158 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 ANAPC16Q96DE5 110 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 EHMT1Q9H9B1 1298 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 STRIP2Q9ULQ0 834 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 PCDHB14Q9Y5E9 798 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 PCDHGC5Q9Y5F6 944 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 CORINQ9Y5Q5 1042 aa7.79□□□□□ -1.16
RFC4-204ENST00000417876 A0A0A0MRY4 1105 aa7.78□□□□□ -1.16
RFC4-204ENST00000417876 WISP1O95388 367 aa7.78□□□□□ -1.16
RFC4-204ENST00000417876 BPNT1O95861 308 aa7.78□□□□□ -1.16
RFC4-204ENST00000417876 GIPRP48546 466 aa7.78□□□□□ -1.16
RFC4-204ENST00000417876 ZNF165P49910 485 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms