RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 SRSF11Q05519 484 aaKnown RBP8.34□□□□□ -1.07
NIFKP3-201ENST00000417799 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
NIFKP3-201ENST00000417799 CCNJLQ8IV13 435 aa8.34□□□□□ -1.07
NIFKP3-201ENST00000417799 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
NIFKP3-201ENST00000417799 OXCT2Q9BYC2 517 aaPredicted RBP8.34□□□□□ -1.07
NIFKP3-201ENST00000417799 PBX4Q9BYU1 374 aa8.34□□□□□ -1.07
NIFKP3-201ENST00000417799 GDF2Q9UK05 429 aaPredicted RBP8.34□□□□□ -1.07
NIFKP3-201ENST00000417799 CLTCQ00610 1675 aaKnown RBP8.34□□□□□ -1.08
NIFKP3-201ENST00000417799 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 CCDC144AA2RUR9 1427 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 ELOA3DA6NLF2 546 aaPredicted RBP8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 GSTT1P30711 240 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 FCGRTP55899 365 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 KRT76Q01546 638 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 ELOA3BQ3SY89 546 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 MICALL1Q8N3F8 863 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 TMEM102Q8N9M5 508 aaPredicted RBP8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 ELOA3Q8NG57 546 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 NXPE3Q969Y0 559 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 HHIPQ96QV1 700 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 MDFIQ99750 246 aa8.33□□□□□ -1.08
NIFKP3-201ENST00000417799 NOS1P29475 1434 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 PDE2AO00408 941 aaPredicted RBP8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 ALAS2P22557 587 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 PERM1Q5SV97 790 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 CEP135Q66GS9 1140 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 ELMSAN1Q6PJG2 1045 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 SLCO4C1Q6ZQN7 724 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 PLD4Q96BZ4 506 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 BHLHE41Q9C0J9 482 aaPredicted RBP8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 ABCB6Q9NP58 842 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 NAGPAQ9UK23 515 aa8.32□□□□□ -1.08
NIFKP3-201ENST00000417799 ADAMTSL3P82987 1691 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 TRPM2O94759 1503 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 ADAMTS2O95450 1211 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 XRCC5P13010 732 aaKnown RBP8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 GRIA4P48058 902 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 CEBPAP49715 358 aaPredicted RBP8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 DTHD1Q6ZMT9 781 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 METTL5Q9NRN9 209 aaKnown RBP8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 SLC52A1Q9NWF4 448 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 ERVK-7P63135 1459 aa8.31□□□□□ -1.08
NIFKP3-201ENST00000417799 MADDQ8WXG6 1647 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 METTL12A8MUP2 240 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 IDI1Q13907 227 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 MEI1Q5TIA1 1274 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 PSAPL1Q6NUJ1 521 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 C3orf58Q8NDZ4 430 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 ASAP3Q8TDY4 903 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 ACDQ96AP0 544 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 LPIN3Q9BQK8 851 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 AKAP2Q9Y2D5 859 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 TONSLQ96HA7 1378 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 MROH2AA6NES4 1674 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
NIFKP3-201ENST00000417799 SPHKAPQ2M3C7 1700 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 A0A096LPE4 126 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 A0A1W2PPZ6 126 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 EPXP11678 715 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 ZNF76P36508 570 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 HDLBPQ00341 1268 aaKnown RBP8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 FANCCQ00597 558 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 SPRED3Q2MJR0 410 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 RNF34Q969K3 372 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 ZFYVE1Q9HBF4 777 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 SPATA31D1Q6ZQQ2 1576 aa8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
NIFKP3-201ENST00000417799 PREX1Q8TCU6 1659 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 SYNMO15061 1565 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 TNRQ92752 1358 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 FAM181BA6NEQ2 426 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 ITPKAP23677 461 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 PTPN12Q05209 780 aaKnown RBP8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 RGL3Q3MIN7 710 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 C9orf131Q5VYM1 1079 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 TTF2Q9UNY4 1162 aaKnown RBP8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 CLTCL1P53675 1640 aa8.28□□□□□ -1.08
NIFKP3-201ENST00000417799 RIMS1Q86UR5 1692 aaKnown RBP8.27□□□□□ -1.08
NIFKP3-201ENST00000417799 UGGT1Q9NYU2 1555 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 RGS9O75916 674 aaPredicted RBP8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 C1orf229Q6ZS94 237 aaPredicted RBP8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 GALNT6Q8NCL4 622 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 NUDT8Q8WV74 236 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 EDARADDQ8WWZ3 215 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 BSNDQ8WZ55 320 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 TTC9Q92623 222 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 PPM1HQ9ULR3 514 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 TRIM33Q9UPN9 1127 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 SPATA31E1Q6ZUB1 1445 aa8.27□□□□□ -1.09
NIFKP3-201ENST00000417799 PTPRMP28827 1452 aa8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 SLURP2P0DP57 97 aa8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 PTPRAP18433 802 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms