RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 HHIPL2Q6UWX4 724 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 MIGA1Q8NAN2 632 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 APPBP2Q92624 585 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 ADARB2Q9NS39 739 aaKnown RBP10.18□□□□□ -0.78
TRIM48-201ENST00000417545 AATFQ9NY61 560 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRIM48-201ENST00000417545 CLEC11AQ9Y240 323 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 YY1P25490 414 aa10.17□□□□□ -0.78
TRIM48-201ENST00000417545 USP5P45974 858 aa10.17□□□□□ -0.78
TRIM48-201ENST00000417545 NMIQ13287 307 aaPredicted RBP10.17□□□□□ -0.78
TRIM48-201ENST00000417545 GRIK5Q16478 980 aa10.17□□□□□ -0.78
TRIM48-201ENST00000417545 CWC27Q6UX04 472 aaKnown RBP10.17□□□□□ -0.78
TRIM48-201ENST00000417545 TICAM2Q86XR7 235 aa10.17□□□□□ -0.78
TRIM48-201ENST00000417545 GMLQ99445 158 aa10.17□□□□□ -0.78
TRIM48-201ENST00000417545 CRNKL1Q9BZJ0 848 aaKnown RBP10.17□□□□□ -0.78
TRIM48-201ENST00000417545 VEZTQ9HBM0 779 aa10.17□□□□□ -0.78
TRIM48-201ENST00000417545 GPBP1L1Q9HC44 474 aaPredicted RBP10.17□□□□□ -0.78
TRIM48-201ENST00000417545 DAGLAQ9Y4D2 1042 aa10.17□□□□□ -0.78
TRIM48-201ENST00000417545 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
TRIM48-201ENST00000417545 MBD4O95243 580 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 APPP05067 770 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 VEGFAP15692 232 aaPredicted RBP10.16□□□□□ -0.78
TRIM48-201ENST00000417545 EPHX2P34913 555 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 EPS15P42566 896 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 TNNI2P48788 182 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 KIAA1211Q6ZU35 1233 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 SAMD7Q7Z3H4 446 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 TEX11Q8IYF3 940 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 L3MBTL3Q96JM7 780 aaPredicted RBP10.16□□□□□ -0.78
TRIM48-201ENST00000417545 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 HELLSQ9NRZ9 838 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 USP40Q9NVE5 1235 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 NAV1Q8NEY1 1877 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 RAD50Q92878 1312 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 SHTN1A0MZ66 631 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 PICALMQ13492 652 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 TNFAIP1Q13829 316 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 MCMDC2Q4G0Z9 681 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 ZMYM1Q5SVZ6 1142 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 USP50Q70EL3 339 aaPredicted RBP10.16□□□□□ -0.78
TRIM48-201ENST00000417545 PNMA8AQ86V59 439 aaPredicted RBP10.16□□□□□ -0.78
TRIM48-201ENST00000417545 ZDHHC15Q96MV8 337 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 MRIQ9BWK5 157 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 ARMT1Q9H993 441 aa10.16□□□□□ -0.78
TRIM48-201ENST00000417545 GAKO14976 1311 aa10.15□□□□□ -0.78
TRIM48-201ENST00000417545 A0A0D9SFI3 127 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 CLRN2A0PK11 232 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 SPDYE2BA6NHP3 402 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 GPAA1O43292 621 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 SPDYE6P0CI01 402 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 GNAT2P19087 354 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 CHMLP26374 656 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 ZNF280AP59817 542 aaPredicted RBP10.15□□□□□ -0.79
TRIM48-201ENST00000417545 DYNLL1P63167 89 aaKnown RBP10.15□□□□□ -0.79
TRIM48-201ENST00000417545 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.79
TRIM48-201ENST00000417545 ZSCAN29Q8IWY8 852 aaPredicted RBP10.15□□□□□ -0.79
TRIM48-201ENST00000417545 TRPM4Q8TD43 1214 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 DCPSQ96C86 337 aaKnown RBP10.15□□□□□ -0.79
TRIM48-201ENST00000417545 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.79
TRIM48-201ENST00000417545 FAM227BQ96M60 508 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 NACAP1Q9BZK3 213 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 TDRD3Q9H7E2 651 aaKnown RBP10.15□□□□□ -0.79
TRIM48-201ENST00000417545 SLC4A4Q9Y6R1 1079 aa10.15□□□□□ -0.79
TRIM48-201ENST00000417545 CCDC171Q6TFL3 1326 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 GPR75-ASB3A0A0A6YYF3 556 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 TCRBV5S4A2TA0A5A2 114 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 M0R2C6 588 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 WNT10BO00744 389 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 TDO2P48775 406 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 SLFNL1Q499Z3 407 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 CCDC129Q6ZRS4 1044 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 ADGRA1Q86SQ6 560 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 LCORLQ8N3X6 602 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 MTMR14Q8NCE2 650 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 SH3RF3Q8TEJ3 882 aaPredicted RBP10.14□□□□□ -0.79
TRIM48-201ENST00000417545 OSBP2Q969R2 916 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 TRIM34Q9BYJ4 488 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 PUS7LQ9H0K6 701 aaKnown RBP10.14□□□□□ -0.79
TRIM48-201ENST00000417545 TAF1DQ9H5J8 278 aaPredicted RBP10.14□□□□□ -0.79
TRIM48-201ENST00000417545 NMRK2Q9NPI5 230 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 GGA3Q9NZ52 723 aa10.14□□□□□ -0.79
TRIM48-201ENST00000417545 CDK5RAP2Q96SN8 1893 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 TCP10L2B9ZVM9 353 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 CHGBP05060 677 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 CACNB3P54284 484 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 NBPF9Q3BBW0 867 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 ANGEL2Q5VTE6 544 aaKnown RBP10.13□□□□□ -0.79
TRIM48-201ENST00000417545 CDC42EP5Q6NZY7 148 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 ZNF384Q8TF68 577 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 TGFBRAP1Q8WUH2 860 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 PRMT6Q96LA8 375 aaPredicted RBP10.13□□□□□ -0.79
TRIM48-201ENST00000417545 SEC62Q99442 399 aaKnown RBP10.13□□□□□ -0.79
TRIM48-201ENST00000417545 ESYT1Q9BSJ8 1104 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 NAPBQ9H115 298 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 ANO2Q9NQ90 1003 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 ZNF70Q9UC06 446 aaPredicted RBP10.13□□□□□ -0.79
TRIM48-201ENST00000417545 PCDHAC2Q9Y5I4 1007 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 MYH1P12882 1939 aa10.13□□□□□ -0.79
TRIM48-201ENST00000417545 FOCADQ5VW36 1801 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms