RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 FZD1Q9UP38 647 aa13.5□□□□□ -0.25
TM9SF4-203ENST00000417389 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 BTDP43251 543 aa13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 NAA16Q6N069 864 aaPredicted RBP13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 CDC42EP5Q6NZY7 148 aa13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 HHIPL1Q96JK4 782 aa13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
TM9SF4-203ENST00000417389 MROH7-TTC4A0A0A0MT08 1334 aa13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 IREB2P48200 963 aaKnown RBP13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 MAP2K1Q02750 393 aaPredicted RBP13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 NOGQ13253 232 aa13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 PICALMQ13492 652 aa13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 ZSCAN29Q8IWY8 852 aaPredicted RBP13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 ZNF512BQ96KM6 892 aaPredicted RBP13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 PCDHB15Q9Y5E8 787 aa13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 NDUFB9Q9Y6M9 179 aa13.48□□□□□ -0.25
TM9SF4-203ENST00000417389 ZBTB22O15209 634 aa13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 NSUN4Q96CB9 384 aaKnown RBP13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 HOOK2Q96ED9 719 aa13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 PAPPA2Q9BXP8 1791 aa13.47□□□□□ -0.25
TM9SF4-203ENST00000417389 BAG3O95817 575 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 MAP2K2P36507 400 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 MAP3K12Q12852 859 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 NFIAQ12857 509 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 CDAN1Q8IWY9 1227 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 DCTPP1Q9H773 170 aa13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.25
TM9SF4-203ENST00000417389 GAKO14976 1311 aa13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 GOLIM4O00461 696 aa13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 CYP7A1P22680 504 aa13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 RGS3P49796 1198 aa13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 KIF23Q02241 960 aaPredicted RBP13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 TTF1Q15361 905 aaPredicted RBP13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 FAM151AQ8WW52 585 aa13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 BOLA2Q9H3K6 86 aa13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 AATFQ9NY61 560 aaKnown RBP eCLIP13.45□□□□□ -0.26
TM9SF4-203ENST00000417389 GPR75-ASB3A0A0A6YYF3 556 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 SLC10A3P09131 477 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 AAMPQ13685 434 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 DCAF15Q66K64 600 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 TEX11Q8IYF3 940 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 MAGEB6Q8N7X4 407 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 TEPSINQ96N21 525 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 CSADQ9Y600 493 aa13.44□□□□□ -0.26
TM9SF4-203ENST00000417389 MYH2Q9UKX2 1941 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 PLCG2P16885 1265 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 ANKRD13AQ8IZ07 590 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 MIGA1Q8NAN2 632 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 ZNF384Q8TF68 577 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 CLMNQ96JQ2 1002 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 WRNIP1Q96S55 665 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
TM9SF4-203ENST00000417389 SSC5DA1L4H1 1573 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 FAM155AB1AL88 458 aaPredicted RBP13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 ENTPD3O75355 529 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 ATP5JP18859 108 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 SH3RF3Q8TEJ3 882 aaPredicted RBP13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 ZNF341Q9BYN7 854 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 ELP3Q9H9T3 547 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 PAG1Q9NWQ8 432 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 WBP1LQ9NX94 342 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 PCNTO95613 3336 aa13.42□□□□□ -0.26
TM9SF4-203ENST00000417389 FOXN1O15353 648 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 WDHD1O75717 1129 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 CTCFP49711 727 aaPredicted RBP13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 LDLRAD1Q5T700 205 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 SLC9C2Q5TAH2 1124 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 TSHZ3Q63HK5 1081 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 TGFBRAP1Q8WUH2 860 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 GCC1Q96CN9 775 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 EDC3Q96F86 508 aaKnown RBP13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 IDI2Q9BXS1 227 aa13.41□□□□□ -0.26
TM9SF4-203ENST00000417389 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms