RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PDS5AQ29RF7 1337 aaKnown RBP31.34■■■□□ 2.61
VEGFA-208ENST00000417285 A0A1B0GUL7 405 aa31.34■■■□□ 2.61
VEGFA-208ENST00000417285 GTF2A2P52657 109 aa31.34■■■□□ 2.61
VEGFA-208ENST00000417285 MVPQ14764 893 aaKnown RBP31.34■■■□□ 2.61
VEGFA-208ENST00000417285 DIXDC1Q155Q3 683 aa31.34■■■□□ 2.61
VEGFA-208ENST00000417285 CDC42EP5Q6NZY7 148 aa31.34■■■□□ 2.61
VEGFA-208ENST00000417285 SPTY2D1Q68D10 685 aaPredicted RBP31.33■■■□□ 2.61
VEGFA-208ENST00000417285 XAGE2Q96GT9 111 aa31.33■■■□□ 2.61
VEGFA-208ENST00000417285 MS4A4AQ96JQ5 239 aa31.33■■■□□ 2.61
VEGFA-208ENST00000417285 RPAP1Q9BWH6 1393 aaPredicted RBP31.32■■■□□ 2.6
VEGFA-208ENST00000417285 G3BP1Q13283 466 aaKnown RBP eCLIP31.32■■■□□ 2.6
VEGFA-208ENST00000417285 SLF2Q8IX21 1173 aa31.32■■■□□ 2.6
VEGFA-208ENST00000417285 PTPN18Q99952 460 aa31.32■■■□□ 2.6
VEGFA-208ENST00000417285 USP40Q9NVE5 1235 aa31.32■■■□□ 2.6
VEGFA-208ENST00000417285 HPS5Q9UPZ3 1129 aa31.31■■■□□ 2.6
VEGFA-208ENST00000417285 RASGRF1Q13972 1273 aa31.3■■■□□ 2.6
VEGFA-208ENST00000417285 FBXO46Q6PJ61 603 aaPredicted RBP31.3■■■□□ 2.6
VEGFA-208ENST00000417285 ERO1BQ86YB8 467 aa31.3■■■□□ 2.6
VEGFA-208ENST00000417285 TMEM57Q8N5G2 664 aa31.3■■■□□ 2.6
VEGFA-208ENST00000417285 NEUROD6Q96NK8 337 aa31.3■■■□□ 2.6
VEGFA-208ENST00000417285 WRNIP1Q96S55 665 aa31.3■■■□□ 2.6
VEGFA-208ENST00000417285 ZNF341Q9BYN7 854 aa31.3■■■□□ 2.6
VEGFA-208ENST00000417285 SPDYE5A6NIY4 337 aa31.29■■■□□ 2.6
VEGFA-208ENST00000417285 FAM163AQ96GL9 167 aaPredicted RBP31.29■■■□□ 2.6
VEGFA-208ENST00000417285 GORABQ5T7V8 394 aa31.28■■■□□ 2.6
VEGFA-208ENST00000417285 FTSJ3Q8IY81 847 aaKnown RBP31.28■■■□□ 2.6
VEGFA-208ENST00000417285 CNKSR2Q8WXI2 1034 aa31.28■■■□□ 2.6
VEGFA-208ENST00000417285 OTUD5Q96G74 571 aa31.28■■■□□ 2.6
VEGFA-208ENST00000417285 ABCF2Q9UG63 623 aa31.28■■■□□ 2.6
VEGFA-208ENST00000417285 CCL15-CCL14A0A0B4J2E2 113 aa31.27■■■□□ 2.6
VEGFA-208ENST00000417285 PNMA6EA0A0J9YXQ4 647 aa31.27■■■□□ 2.6
VEGFA-208ENST00000417285 TCP10Q12799 353 aa31.27■■■□□ 2.6
VEGFA-208ENST00000417285 CRHR2Q13324 411 aa31.27■■■□□ 2.6
VEGFA-208ENST00000417285 CCL15Q16663 113 aa31.27■■■□□ 2.6
VEGFA-208ENST00000417285 DZIP1Q86YF9 867 aaKnown RBP31.27■■■□□ 2.6
VEGFA-208ENST00000417285 ZKSCAN4Q969J2 545 aaPredicted RBP31.27■■■□□ 2.6
VEGFA-208ENST00000417285 SNCAIPQ9Y6H5 919 aa31.27■■■□□ 2.6
VEGFA-208ENST00000417285 MIGA2Q7L4E1 593 aa31.26■■■□□ 2.59
VEGFA-208ENST00000417285 BRI3BPQ8WY22 251 aa31.26■■■□□ 2.59
VEGFA-208ENST00000417285 ERO1AQ96HE7 468 aa31.26■■■□□ 2.59
VEGFA-208ENST00000417285 WDHD1O75717 1129 aaPredicted RBP31.25■■■□□ 2.59
VEGFA-208ENST00000417285 CETPP11597 493 aa31.25■■■□□ 2.59
VEGFA-208ENST00000417285 NFIAQ12857 509 aa31.25■■■□□ 2.59
VEGFA-208ENST00000417285 FAM198AQ9UFP1 575 aa31.25■■■□□ 2.59
VEGFA-208ENST00000417285 GAKO14976 1311 aa31.24■■■□□ 2.59
VEGFA-208ENST00000417285 IDI2Q9BXS1 227 aa31.24■■■□□ 2.59
VEGFA-208ENST00000417285 ZNF112Q9UJU3 913 aa31.24■■■□□ 2.59
VEGFA-208ENST00000417285 MYH13Q9UKX3 1938 aa31.24■■■□□ 2.59
VEGFA-208ENST00000417285 ENTPD3O75355 529 aa31.23■■■□□ 2.59
VEGFA-208ENST00000417285 ATP8B2P98198 1209 aa31.23■■■□□ 2.59
VEGFA-208ENST00000417285 PPATQ06203 517 aa31.23■■■□□ 2.59
VEGFA-208ENST00000417285 PPIL2Q13356 520 aa31.23■■■□□ 2.59
VEGFA-208ENST00000417285 SNAPC2Q13487 334 aa31.23■■■□□ 2.59
VEGFA-208ENST00000417285 ERICH6Q7L0X2 663 aa31.23■■■□□ 2.59
VEGFA-208ENST00000417285 ZFYVE28Q9HCC9 887 aa31.23■■■□□ 2.59
VEGFA-208ENST00000417285 SP3Q02447 781 aa31.22■■■□□ 2.59
VEGFA-208ENST00000417285 POLA2Q14181 598 aa31.22■■■□□ 2.59
VEGFA-208ENST00000417285 ZCCHC17Q9NP64 241 aaKnown RBP31.22■■■□□ 2.59
VEGFA-208ENST00000417285 GPR108Q9NPR9 543 aa31.22■■■□□ 2.59
VEGFA-208ENST00000417285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.22■■■□□ 2.59
VEGFA-208ENST00000417285 LAMB1P07942 1786 aa31.21■■■□□ 2.59
VEGFA-208ENST00000417285 SPATA5Q8NB90 893 aa31.21■■■□□ 2.59
VEGFA-208ENST00000417285 SSH3Q8TE77 659 aa31.21■■■□□ 2.59
VEGFA-208ENST00000417285 HMG20BQ9P0W2 317 aa31.21■■■□□ 2.59
VEGFA-208ENST00000417285 TRIM17Q9Y577 477 aa31.21■■■□□ 2.59
VEGFA-208ENST00000417285 IRF6O14896 467 aa31.2■■■□□ 2.59
VEGFA-208ENST00000417285 LDHCP07864 332 aa31.2■■■□□ 2.59
VEGFA-208ENST00000417285 UQCRFS1P1P0C7P4 283 aa31.2■■■□□ 2.59
VEGFA-208ENST00000417285 SOX10P56693 466 aa31.2■■■□□ 2.59
VEGFA-208ENST00000417285 ARHGEF6Q15052 776 aa31.2■■■□□ 2.59
VEGFA-208ENST00000417285 TAF1CQ15572 869 aaPredicted RBP31.2■■■□□ 2.59
VEGFA-208ENST00000417285 ITPRIPQ8IWB1 547 aa31.2■■■□□ 2.59
VEGFA-208ENST00000417285 ZBTB7BO15156 539 aaPredicted RBP31.19■■■□□ 2.58
VEGFA-208ENST00000417285 ARID4AP29374 1257 aaPredicted RBP31.19■■■□□ 2.58
VEGFA-208ENST00000417285 INPP5BP32019 993 aa31.19■■■□□ 2.58
VEGFA-208ENST00000417285 RGS3P49796 1198 aa31.19■■■□□ 2.58
VEGFA-208ENST00000417285 GSTO1P78417 241 aa31.19■■■□□ 2.58
VEGFA-208ENST00000417285 OTOP1Q7RTM1 612 aa31.19■■■□□ 2.58
VEGFA-208ENST00000417285 OTOFQ9HC10 1997 aa31.19■■■□□ 2.58
VEGFA-208ENST00000417285 MAP4K4O95819 1239 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-208ENST00000417285 MECOMQ03112 1051 aa31.18■■■□□ 2.58
VEGFA-208ENST00000417285 ZFPM1Q8IX07 1006 aa31.18■■■□□ 2.58
VEGFA-208ENST00000417285 FAM43AQ8N2R8 423 aa31.18■■■□□ 2.58
VEGFA-208ENST00000417285 GPR75-ASB3A0A0A6YYF3 556 aa31.17■■■□□ 2.58
VEGFA-208ENST00000417285 OS9Q13438 667 aaPredicted RBP31.17■■■□□ 2.58
VEGFA-208ENST00000417285 EFCC1Q9HA90 598 aa31.17■■■□□ 2.58
VEGFA-208ENST00000417285 MROH7-TTC4A0A0A0MT08 1334 aa31.17■■■□□ 2.58
VEGFA-208ENST00000417285 SURF6O75683 361 aaKnown RBP31.16■■■□□ 2.58
VEGFA-208ENST00000417285 BTDP43251 543 aa31.16■■■□□ 2.58
VEGFA-208ENST00000417285 NOL9Q5SY16 702 aaKnown RBP31.16■■■□□ 2.58
VEGFA-208ENST00000417285 CD99L2Q8TCZ2 262 aa31.16■■■□□ 2.58
VEGFA-208ENST00000417285 RLBP1P12271 317 aa31.15■■■□□ 2.58
VEGFA-208ENST00000417285 ZSCAN29Q8IWY8 852 aaPredicted RBP31.15■■■□□ 2.58
VEGFA-208ENST00000417285 BTBD19C9JJ37 291 aa31.14■■■□□ 2.58
VEGFA-208ENST00000417285 NPM3O75607 178 aaKnown RBP31.14■■■□□ 2.58
VEGFA-208ENST00000417285 MAP3K10Q02779 954 aa31.14■■■□□ 2.58
VEGFA-208ENST00000417285 CCDC158Q5M9N0 1113 aa31.14■■■□□ 2.58
VEGFA-208ENST00000417285 PTPN22Q9Y2R2 807 aa31.14■■■□□ 2.58
VEGFA-208ENST00000417285 NOP58Q9Y2X3 529 aaKnown RBP31.14■■■□□ 2.58
VEGFA-208ENST00000417285 TNNI3KQ59H18 835 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms