RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 CT47A1Q5JQC4 288 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 ILDR1Q86SU0 546 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 RABEP2Q9H5N1 569 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 FANCLQ9NW38 375 aa16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 DBF4Q9UBU7 674 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-204ENST00000416649 STRCQ7RTU9 1775 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 CTDNEP1O95476 244 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 MARCKSP29966 332 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 PIP4K2BP78356 416 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 VSTM4Q8IW00 320 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 BPIFA3Q9BQP9 254 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 ANKZF1Q9H8Y5 726 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 LIG3P49916 1009 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 MYL5Q02045 173 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 MTF1Q14872 753 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 CCDC91Q7Z6B0 441 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 KIFC2Q96AC6 838 aa16.85■□□□□ 0.29
NCKIPSD-204ENST00000416649 CYP21A2P08686 494 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 BEND3Q5T5X7 828 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 SMARCC2Q8TAQ2 1214 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 SPTLC2O15270 562 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 CASP8Q14790 479 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 KIF4BQ2VIQ3 1234 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 ALDH8A1Q9H2A2 487 aaPredicted RBP16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
NCKIPSD-204ENST00000416649 GOLGA6L9A6NEM1 432 aa16.83■□□□□ 0.29
NCKIPSD-204ENST00000416649 MCTP2Q6DN12 878 aa16.83■□□□□ 0.29
NCKIPSD-204ENST00000416649 MMS22LQ6ZRQ5 1243 aa16.83■□□□□ 0.29
NCKIPSD-204ENST00000416649 BANK1Q8NDB2 785 aa16.83■□□□□ 0.29
NCKIPSD-204ENST00000416649 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.29
NCKIPSD-204ENST00000416649 GJB4Q9NTQ9 266 aa16.83■□□□□ 0.29
NCKIPSD-204ENST00000416649 KIF1AQ12756 1690 aa16.83■□□□□ 0.29
NCKIPSD-204ENST00000416649 CUTAO60888 179 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 TADA2BQ86TJ2 420 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 TMEM139Q8IV31 216 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 LINC00301Q8NCQ3 95 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 MRPL44Q9H9J2 332 aaKnown RBP16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 DCCP43146 1447 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 VSNL1P62760 191 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 DNAJC21Q5F1R6 531 aaKnown RBP16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 SYNE3Q6ZMZ3 975 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 FCHSD1Q86WN1 690 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 STK11IPQ8N1F8 1099 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 CXorf56Q9H5V9 222 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 L1RE1Q9UN81 338 aa16.83■□□□□ 0.28
NCKIPSD-204ENST00000416649 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 ALS2Q96Q42 1657 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 A0A0U1RQJ8 604 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 NUTM2BA6NNL0 878 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 NUTM2EB1AL46 878 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 PFKFB2O60825 505 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 PFKFB1P16118 471 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 MMP14P50281 582 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 PNOCQ13519 176 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 NUTM2AQ8IVF1 878 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 CPLX3Q8WVH0 158 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 ATRIPQ8WXE1 791 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 SASH1O94885 1247 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 GDAP1L1Q96MZ0 367 aa16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-204ENST00000416649 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 IKBKBO14920 756 aa16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 ZNF569Q5MCW4 686 aa16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 RTEL1Q9NZ71 1219 aa16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 XIRP1Q702N8 1843 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 ANKRD20A12PQ8NF67 263 aa16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 LLPHQ9BRT6 129 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-204ENST00000416649 A0A1W2PQ27 194 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 A0A1W2PQ64 194 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 A0A1W2PQD8 194 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 MAP2K2P36507 400 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 FAM71BQ8TC56 605 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 KCNG4Q8TDN1 519 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 MED23Q9ULK4 1368 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 SOWAHDA6NJG2 315 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 RNF40O75150 1001 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 PPFIA4O75335 1185 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 ERLIN2O94905 339 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 SYKP43405 635 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 LRRIQ3A6PVS8 624 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 RPS6KA5O75582 802 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 CCDC172P0C7W6 258 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 DCAF5Q96JK2 942 aa16.8■□□□□ 0.28
NCKIPSD-204ENST00000416649 NEDD4P46934 1319 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms