RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SREBF2Q12772 1141 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 VGLL4Q14135 290 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 ANKRD13AQ8IZ07 590 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.59
UBXN4-203ENST00000416538 XAGE2Q96GT9 111 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 CFHR5Q9BXR6 569 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 C1orf115Q9H7X2 142 aa18.75■□□□□ 0.59
UBXN4-203ENST00000416538 NFIAQ12857 509 aa18.74■□□□□ 0.59
UBXN4-203ENST00000416538 CDC42EP5Q6NZY7 148 aa18.74■□□□□ 0.59
UBXN4-203ENST00000416538 SIPA1L1O43166 1804 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 PHIPQ8WWQ0 1821 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 MANSC4A6NHS7 340 aaPredicted RBP18.73■□□□□ 0.59
UBXN4-203ENST00000416538 UNCXA6NJT0 531 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 GPR25O00155 361 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 SEMA3EO15041 775 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 ABCB7O75027 752 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 TNNI2P48788 182 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 POLA2Q14181 598 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 FKBP1CQ5VVH2 108 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 PI16Q6UXB8 463 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 FAM83AQ86UY5 434 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 IFNL1Q8IU54 200 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 ZNF384Q8TF68 577 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 OPTNQ96CV9 577 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 DENND2AQ9ULE3 1009 aa18.73■□□□□ 0.59
UBXN4-203ENST00000416538 FOCADQ5VW36 1801 aa18.72■□□□□ 0.59
UBXN4-203ENST00000416538 DOCK1Q14185 1865 aa18.72■□□□□ 0.59
UBXN4-203ENST00000416538 LDHBP07195 334 aaKnown RBP18.72■□□□□ 0.59
UBXN4-203ENST00000416538 CTU1Q7Z7A3 348 aaKnown RBP18.72■□□□□ 0.59
UBXN4-203ENST00000416538 PTPN18Q99952 460 aa18.72■□□□□ 0.59
UBXN4-203ENST00000416538 GNL3LQ9NVN8 582 aaKnown RBP18.72■□□□□ 0.59
UBXN4-203ENST00000416538 TMOD2Q9NZR1 351 aa18.72■□□□□ 0.59
UBXN4-203ENST00000416538 FAM198AQ9UFP1 575 aa18.72■□□□□ 0.59
UBXN4-203ENST00000416538 SNCAIPQ9Y6H5 919 aa18.72■□□□□ 0.59
UBXN4-203ENST00000416538 GAKO14976 1311 aa18.72■□□□□ 0.59
UBXN4-203ENST00000416538 PDS5AQ29RF7 1337 aaKnown RBP18.72■□□□□ 0.59
UBXN4-203ENST00000416538 ATRNL1Q5VV63 1379 aa18.71■□□□□ 0.59
UBXN4-203ENST00000416538 NOM1Q5C9Z4 860 aaKnown RBP18.71■□□□□ 0.59
UBXN4-203ENST00000416538 MS4A4AQ96JQ5 239 aa18.71■□□□□ 0.59
UBXN4-203ENST00000416538 ATAD5Q96QE3 1844 aa18.71■□□□□ 0.59
UBXN4-203ENST00000416538 MAP3K9P80192 1104 aa18.7■□□□□ 0.58
UBXN4-203ENST00000416538 CAP1Q01518 475 aa18.7■□□□□ 0.58
UBXN4-203ENST00000416538 TCP10Q12799 353 aa18.7■□□□□ 0.58
UBXN4-203ENST00000416538 ZFPM1Q8IX07 1006 aa18.7■□□□□ 0.58
UBXN4-203ENST00000416538 HTTP42858 3142 aa18.7■□□□□ 0.58
UBXN4-203ENST00000416538 TESPA1A2RU30 521 aaPredicted RBP18.69■□□□□ 0.58
UBXN4-203ENST00000416538 MYCNP04198 464 aaPredicted RBP18.69■□□□□ 0.58
UBXN4-203ENST00000416538 ITPRIPQ8IWB1 547 aa18.69■□□□□ 0.58
UBXN4-203ENST00000416538 SSH3Q8TE77 659 aa18.69■□□□□ 0.58
UBXN4-203ENST00000416538 BRI3BPQ8WY22 251 aa18.69■□□□□ 0.58
UBXN4-203ENST00000416538 OTUD5Q96G74 571 aa18.69■□□□□ 0.58
UBXN4-203ENST00000416538 WRNIP1Q96S55 665 aa18.69■□□□□ 0.58
UBXN4-203ENST00000416538 HMG20BQ9P0W2 317 aa18.69■□□□□ 0.58
UBXN4-203ENST00000416538 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 ZBTB7BO15156 539 aaPredicted RBP18.68■□□□□ 0.58
UBXN4-203ENST00000416538 ARID4AP29374 1257 aaPredicted RBP18.68■□□□□ 0.58
UBXN4-203ENST00000416538 CRHR2Q13324 411 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
UBXN4-203ENST00000416538 MIGA2Q7L4E1 593 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
UBXN4-203ENST00000416538 PANK1Q8TE04 598 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 FAM151AQ8WW52 585 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 ZKSCAN4Q969J2 545 aaPredicted RBP18.68■□□□□ 0.58
UBXN4-203ENST00000416538 NEUROD6Q96NK8 337 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 ABCF2Q9UG63 623 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 AKAP2Q9Y2D5 859 aa18.68■□□□□ 0.58
UBXN4-203ENST00000416538 SLURP2P0DP57 97 aa18.67■□□□□ 0.58
UBXN4-203ENST00000416538 INPP5BP32019 993 aa18.67■□□□□ 0.58
UBXN4-203ENST00000416538 MCAMP43121 646 aa18.67■□□□□ 0.58
UBXN4-203ENST00000416538 CSADQ9Y600 493 aa18.67■□□□□ 0.58
UBXN4-203ENST00000416538 FKTNO75072 461 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 WDHD1O75717 1129 aaPredicted RBP18.66■□□□□ 0.58
UBXN4-203ENST00000416538 ALDH1A1P00352 501 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 INHBEP58166 350 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 SH3BP5LQ7L8J4 393 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 DDX4Q9NQI0 724 aaKnown RBP18.66■□□□□ 0.58
UBXN4-203ENST00000416538 USP40Q9NVE5 1235 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 HPS5Q9UPZ3 1129 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 MROH7-TTC4A0A0A0MT08 1334 aa18.66■□□□□ 0.58
UBXN4-203ENST00000416538 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
UBXN4-203ENST00000416538 RGS19P49795 217 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 RGS3P49796 1198 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 MECOMQ03112 1051 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 G3BP1Q13283 466 aaKnown RBP eCLIP18.65■□□□□ 0.58
UBXN4-203ENST00000416538 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 DZIP1Q86YF9 867 aaKnown RBP18.65■□□□□ 0.58
UBXN4-203ENST00000416538 FAM43AQ8N2R8 423 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 ZGPATQ8N5A5 531 aaKnown RBP18.65■□□□□ 0.58
UBXN4-203ENST00000416538 SPATA5Q8NB90 893 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 DBNDD2Q9BQY9 259 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
UBXN4-203ENST00000416538 CCL15-CCL14A0A0B4J2E2 113 aa18.64■□□□□ 0.57
UBXN4-203ENST00000416538 BTDP43251 543 aa18.64■□□□□ 0.57
UBXN4-203ENST00000416538 SOX10P56693 466 aa18.64■□□□□ 0.57
UBXN4-203ENST00000416538 RHBDL3P58872 404 aa18.64■□□□□ 0.57
UBXN4-203ENST00000416538 CCL15Q16663 113 aa18.64■□□□□ 0.57
UBXN4-203ENST00000416538 IDI2Q9BXS1 227 aa18.64■□□□□ 0.57
UBXN4-203ENST00000416538 ZNF341Q9BYN7 854 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms