RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 MRPL18Q9H0U6 180 aaKnown RBP4.57□□□□□ -1.68
LINC01349-201ENST00000416343 PANK3Q9H999 370 aa4.57□□□□□ -1.68
LINC01349-201ENST00000416343 POLA1P09884 1462 aaPredicted RBP4.56□□□□□ -1.68
LINC01349-201ENST00000416343 RTEL1-TNFRSF6BF6WH68 1400 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 ST20-MTHFSA0A0A6YYL1 179 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 J3QW42 95 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 MMP20O60882 483 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 XYLBO75191 536 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 ARID4AP29374 1257 aaPredicted RBP4.56□□□□□ -1.68
LINC01349-201ENST00000416343 HDAC1Q13547 482 aaPredicted RBP4.56□□□□□ -1.68
LINC01349-201ENST00000416343 TERF2Q15554 542 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 IL22RA1Q8N6P7 574 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 SYAP1Q96A49 352 aaPredicted RBP4.56□□□□□ -1.68
LINC01349-201ENST00000416343 LMBRD1Q9NUN5 540 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 DDX41Q9UJV9 622 aaKnown RBP4.56□□□□□ -1.68
LINC01349-201ENST00000416343 USP20Q9Y2K6 914 aa4.56□□□□□ -1.68
LINC01349-201ENST00000416343 FHOD3Q2V2M9 1422 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 PLEKHH1Q9ULM0 1364 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 KIAA1324LA8MWY0 1029 aaPredicted RBP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 MED26O95402 600 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 CYP2E1P05181 493 aaPredicted RBP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 EIF2AK2P19525 551 aaKnown RBP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 COX20Q5RI15 118 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 CAVIN1Q6NZI2 390 aaKnown RBP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 TREML1Q86YW5 311 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 KRT222Q8N1A0 295 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 CACTIN-AS1Q8N1I8 211 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 CEP120Q8N960 986 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 FMNL2Q96PY5 1086 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 ARID3AQ99856 593 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 TSPY26PQ9H489 355 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 VRTNQ9H8Y1 702 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 CTNNA3Q9UI47 895 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 PCF11O94913 1555 aaKnown RBP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 THOC2Q8NI27 1593 aaKnown RBP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 EPRSP07814 1512 aaKnown RBP4.55□□□□□ -1.68
LINC01349-201ENST00000416343 CLASP1Q7Z460 1538 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 ATAD2BQ9ULI0 1458 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 YEATS2Q9ULM3 1422 aa4.55□□□□□ -1.68
LINC01349-201ENST00000416343 RAD50Q92878 1312 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 BCAR3O75815 825 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 REC8O95072 547 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 PSAPP07602 524 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 CT47B1P0C2W7 299 aaPredicted RBP4.54□□□□□ -1.68
LINC01349-201ENST00000416343 HSP90B1P14625 803 aaKnown RBP4.54□□□□□ -1.68
LINC01349-201ENST00000416343 SSFA2P28290 1259 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 TNNT3P45378 269 aaPredicted RBP4.54□□□□□ -1.68
LINC01349-201ENST00000416343 TRIP4Q15650 581 aaPredicted RBP4.54□□□□□ -1.68
LINC01349-201ENST00000416343 CFAP70Q5T0N1 1121 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.54□□□□□ -1.68
LINC01349-201ENST00000416343 RGL4Q8IZJ4 473 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 UBL7Q96S82 380 aaPredicted RBP4.54□□□□□ -1.68
LINC01349-201ENST00000416343 BRMS1Q9HCU9 246 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 FAM53CQ9NYF3 392 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 USP25Q9UHP3 1055 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 FEZ2Q9UHY8 353 aaPredicted RBP4.54□□□□□ -1.68
LINC01349-201ENST00000416343 HDAC5Q9UQL6 1122 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 PAXBP1Q9Y5B6 917 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 ARHGEF11O15085 1522 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 ARHGEF12Q9NZN5 1544 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 UHRF1BP1LA0JNW5 1464 aa4.54□□□□□ -1.68
LINC01349-201ENST00000416343 POLR1AO95602 1720 aaPredicted RBP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 A6NJR5 290 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 SMTNL1A8MU46 457 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 GOLGA6L6A8MZA4 724 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 APPP05067 770 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 CAPN2P17655 700 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 U2AF2P26368 475 aaKnown RBP eCLIP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 LMOD1P29536 600 aaPredicted RBP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 PPP2R1AP30153 589 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 RARSP54136 660 aaKnown RBP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 RABEP1Q15276 862 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 BMP2KLQ5H9B9 411 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 FAM26DQ5JW98 314 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 GDF6Q6KF10 455 aaPredicted RBP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 ETFBKMTQ8IXQ9 262 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 CMTR1Q8N1G2 835 aaKnown RBP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 GALNT11Q8NCW6 608 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 OR13H1Q8NG92 308 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 KIAA1524Q8TCG1 905 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 CALR3Q96L12 384 aaKnown RBP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 NSUN5Q96P11 429 aaKnown RBP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 MUC3BQ9H195 1237 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.53□□□□□ -1.68
LINC01349-201ENST00000416343 PCMTD2Q9NV79 361 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 TRIM33Q9UPN9 1127 aa4.53□□□□□ -1.68
LINC01349-201ENST00000416343 KDM5CP41229 1560 aa4.53□□□□□ -1.69
LINC01349-201ENST00000416343 EHBP1L1Q8N3D4 1523 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 UGGT2Q9NYU1 1516 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 ZNF608Q9ULD9 1512 aaPredicted RBP4.52□□□□□ -1.69
LINC01349-201ENST00000416343 SNAPC4Q5SXM2 1469 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 PRPF40AO75400 957 aaKnown RBP4.52□□□□□ -1.69
LINC01349-201ENST00000416343 WISP1O95388 367 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 IGLV1-40P01703 118 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 SSTR4P31391 388 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 TMF1P82094 1093 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 FAM69CQ0P6D2 419 aa4.52□□□□□ -1.69
LINC01349-201ENST00000416343 MVPQ14764 893 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms