RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 SERPINA10Q9UK55 444 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 ERCC3P19447 782 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 MAPKAPK5Q8IW41 473 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 B4DLN1 442 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 MRPL12P52815 198 aaKnown RBP12.01□□□□□ -0.49
COL12A1-203ENST00000416123 RAPGEF1Q13905 1077 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 KARSQ15046 597 aaKnown RBP12.01□□□□□ -0.49
COL12A1-203ENST00000416123 IKBKGQ9Y6K9 419 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 CCDC169A6NNP5 214 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 SORBS3O60504 671 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 PARP10Q53GL7 1025 aa12.01□□□□□ -0.49
COL12A1-203ENST00000416123 A0A1W2PRG0 241 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 NEK11Q8NG66 645 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 SAMD9Q5K651 1589 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 KCNQ3O43525 872 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 CGNQ9P2M7 1197 aaKnown RBP12□□□□□ -0.49
COL12A1-203ENST00000416123 SKILP12757 684 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 ZAP70P43403 619 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 CCDC186Q7Z3E2 898 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 SPATA5Q8NB90 893 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 ZNF532Q9HCE3 1301 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 DNAI1Q9UI46 699 aa12□□□□□ -0.49
COL12A1-203ENST00000416123 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
COL12A1-203ENST00000416123 RAD51AP2Q09MP3 1159 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 FAM47AQ5JRC9 791 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 KIFC2Q96AC6 838 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 TBC1D7Q9P0N9 293 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 PPP1R14CQ8TAE6 165 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 IFNKQ9P0W0 207 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 ZNF496Q96IT1 587 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-203ENST00000416123 TXKP42681 527 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 TSNARE1Q96NA8 513 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 TRERF1Q96PN7 1200 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 CDCA7Q9BWT1 371 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-203ENST00000416123 LZTFL1Q9NQ48 299 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 PABPN1LA6NDY0 278 aaKnown RBP11.99□□□□□ -0.49
COL12A1-203ENST00000416123 TAF12Q16514 161 aa11.99□□□□□ -0.49
COL12A1-203ENST00000416123 HSF2BPO75031 334 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 HS2ST1Q7LGA3 356 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 GPIHBP1Q8IV16 184 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 GOLGA6L9A6NEM1 432 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 KRT9P35527 623 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 EDC3Q96F86 508 aaKnown RBP11.98□□□□□ -0.49
COL12A1-203ENST00000416123 TTC12Q9H892 705 aaPredicted RBP11.98□□□□□ -0.49
COL12A1-203ENST00000416123 GUCA1BQ9UMX6 200 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 POLR2DO15514 142 aaKnown RBP11.98□□□□□ -0.49
COL12A1-203ENST00000416123 STAMBPO95630 424 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 LTKP29376 864 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 UVSSAQ2YD98 709 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 NCAPH2Q6IBW4 605 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 SV2BQ7L1I2 683 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
COL12A1-203ENST00000416123 BICDL2A1A5D9 508 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 PPIP5K2O43314 1243 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 FAM182BQ5T319 152 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 GTF2IP78347 998 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 ARHGEF10O15013 1369 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 NOP56O00567 594 aaKnown RBP11.98□□□□□ -0.49
COL12A1-203ENST00000416123 CTSWP56202 376 aa11.98□□□□□ -0.49
COL12A1-203ENST00000416123 SMIM23A6NLE4 172 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 LPIN2Q92539 896 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL12A1-203ENST00000416123 V9GYY5 206 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-203ENST00000416123 CTAGE9A4FU28 777 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 GCKRQ14397 625 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 CCDC65Q8IXS2 484 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 APPBP2Q92624 585 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 SSX2IPQ9Y2D8 614 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 OTUD7BQ6GQQ9 843 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 GIGYF2Q6Y7W6 1299 aaKnown RBP11.97□□□□□ -0.49
COL12A1-203ENST00000416123 NIM1KQ8IY84 436 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 SNX21Q969T3 373 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 BRAPQ7Z569 592 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 EHBP1Q8NDI1 1231 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 FRMPD2Q68DX3 1309 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-203ENST00000416123 SH2D4AQ9H788 454 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 ATP2C2O75185 946 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 SCNN1DP51172 638 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 FAM200AQ8TCP9 573 aa11.97□□□□□ -0.49
COL12A1-203ENST00000416123 ZCCHC11Q5TAX3 1644 aaKnown RBP11.97□□□□□ -0.49
COL12A1-203ENST00000416123 NOD1Q9Y239 953 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 NEURL1BA8MQ27 555 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 TRAF5O00463 557 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 TTLL7Q6ZT98 887 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 ANGEL1Q9UNK9 670 aaKnown RBP11.96□□□□□ -0.49
COL12A1-203ENST00000416123 CEP83Q9Y592 693 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 CCDC175P0C221 793 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 KCNQ4P56696 695 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 BIRC3Q13489 604 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 PLVAPQ9BX97 442 aa11.96□□□□□ -0.49
COL12A1-203ENST00000416123 SRRTQ9BXP5 876 aaKnown RBP11.96□□□□□ -0.49
COL12A1-203ENST00000416123 SLC1A4P43007 532 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms