RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 IL25Q9H293 177 aa11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 VEZTQ9HBM0 779 aa11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 SUGT1Q9Y2Z0 365 aa11.15□□□□□ -0.63
CHRNA1-206ENST00000416004 PAPPA2Q9BXP8 1791 aa11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 CA12O43570 354 aa11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 ANP32AP39687 249 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 BCAMP50895 628 aa11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 SUPT20HL1Q3ZLR7 823 aa11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 ZGPATQ8N5A5 531 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 TEKT1Q969V4 418 aa11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 HAUS7Q99871 368 aa11.14□□□□□ -0.63
CHRNA1-206ENST00000416004 SEMA3EO15041 775 aa11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 CERS5Q8N5B7 392 aa11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 EVI5LQ96CN4 794 aa11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 DNAJC2Q99543 621 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 ASTN2O75129 1339 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-206ENST00000416004 SPDYE2BA6NHP3 402 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 CHGBP05060 677 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 SPDYE6P0CI01 402 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 PHKA1P46020 1223 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 HDLBPQ00341 1268 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 ESYT1Q9BSJ8 1104 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 CRKP46108 304 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 NBR1Q14596 966 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 CCDC158Q5M9N0 1113 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 TTC39AQ5SRH9 613 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 CCDC102BQ68D86 513 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 HOOK2Q96ED9 719 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 DEFB129Q9H1M3 183 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
CHRNA1-206ENST00000416004 THSD7BQ9C0I4 1608 aa11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 CLRN2A0PK11 232 aa11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 GOLIM4O00461 696 aa11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 C22orf23Q9BZE7 217 aa11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 AKAP11Q9UKA4 1901 aa11.11□□□□□ -0.63
CHRNA1-206ENST00000416004 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 MCAMP43121 646 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 ZAP70P43403 619 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 FAM227BQ96M60 508 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 FSD1Q9BTV5 496 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 PAG1Q9NWQ8 432 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 FOXN1O15353 648 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 AOC2O75106 756 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 IREB2P48200 963 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 CWC27Q6UX04 472 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 ZBED3Q96IU2 234 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 ZNF512BQ96KM6 892 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 PRMT6Q96LA8 375 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 USP26Q9BXU7 913 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 SCAF8Q9UPN6 1271 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-206ENST00000416004 SGSM2O43147 1006 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 ARID4AP29374 1257 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 NMIQ13287 307 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 PRKG1Q13976 671 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 PRAMEF18Q5VWM3 479 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 HHIPL2Q6UWX4 724 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 DZIP1Q86YF9 867 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 TNS4Q8IZW8 715 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 KBTBD3Q8NAB2 608 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 TDRD3Q9H7E2 651 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 DIAPH3Q9NSV4 1193 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 ZNF70Q9UC06 446 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 ANGEL1Q9UNK9 670 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 AK9Q5TCS8 1911 aa11.09□□□□□ -0.63
CHRNA1-206ENST00000416004 A0A0D9SFI3 127 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 UNCXA6NJT0 531 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 SLC10A3P09131 477 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 RBM25P49756 843 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 RASGRF1Q13972 1273 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 HMG20BQ9P0W2 317 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 TCP10L2B9ZVM9 353 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 REC8O95072 547 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 CYP2E1P05181 493 aaPredicted RBP11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 RASA3Q14644 834 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 ZDHHC15Q96MV8 337 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 KIF2CQ99661 725 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
CHRNA1-206ENST00000416004 PDS5AQ29RF7 1337 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms