RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PPP4R2Q9NY27 417 aa25.25■■□□□ 1.63
PTPRU-203ENST00000415600 PDS5AQ29RF7 1337 aaKnown RBP25.25■■□□□ 1.63
PTPRU-203ENST00000415600 WDHD1O75717 1129 aaPredicted RBP25.24■■□□□ 1.63
PTPRU-203ENST00000415600 DAGLAQ9Y4D2 1042 aa25.24■■□□□ 1.63
PTPRU-203ENST00000415600 A0A1B0GUL7 405 aa25.23■■□□□ 1.63
PTPRU-203ENST00000415600 PRDX5P30044 214 aa25.23■■□□□ 1.63
PTPRU-203ENST00000415600 TFCP2Q12800 502 aa25.23■■□□□ 1.63
PTPRU-203ENST00000415600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.23■■□□□ 1.63
PTPRU-203ENST00000415600 GTF2A2P52657 109 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 VGLL4Q14135 290 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 DZIP1Q86YF9 867 aaKnown RBP25.22■■□□□ 1.63
PTPRU-203ENST00000415600 FAM151AQ8WW52 585 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 NEUROD6Q96NK8 337 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 ADORA1P30542 326 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 TIMM10P62072 90 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 MLLT1Q03111 559 aaPredicted RBP25.22■■□□□ 1.63
PTPRU-203ENST00000415600 DIXDC1Q155Q3 683 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.22■■□□□ 1.63
PTPRU-203ENST00000415600 TMEM57Q8N5G2 664 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 XAGE2Q96GT9 111 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 WRNIP1Q96S55 665 aa25.22■■□□□ 1.63
PTPRU-203ENST00000415600 CDAN1Q8IWY9 1227 aa25.21■■□□□ 1.63
PTPRU-203ENST00000415600 ZNF341Q9BYN7 854 aa25.21■■□□□ 1.63
PTPRU-203ENST00000415600 ABCF2Q9UG63 623 aa25.21■■□□□ 1.63
PTPRU-203ENST00000415600 TESPA1A2RU30 521 aaPredicted RBP25.2■■□□□ 1.62
PTPRU-203ENST00000415600 RGS19P49795 217 aa25.2■■□□□ 1.62
PTPRU-203ENST00000415600 USP40Q9NVE5 1235 aa25.2■■□□□ 1.62
PTPRU-203ENST00000415600 IGF2BP3O00425 579 aaKnown RBP eCLIP25.19■■□□□ 1.62
PTPRU-203ENST00000415600 RASGRF1Q13972 1273 aa25.19■■□□□ 1.62
PTPRU-203ENST00000415600 CDC42EP5Q6NZY7 148 aa25.19■■□□□ 1.62
PTPRU-203ENST00000415600 ERO1BQ86YB8 467 aa25.19■■□□□ 1.62
PTPRU-203ENST00000415600 GJA5P36382 358 aa25.18■■□□□ 1.62
PTPRU-203ENST00000415600 OS9Q13438 667 aaPredicted RBP25.18■■□□□ 1.62
PTPRU-203ENST00000415600 OTUD5Q96G74 571 aa25.18■■□□□ 1.62
PTPRU-203ENST00000415600 SPDYE5A6NIY4 337 aa25.18■■□□□ 1.62
PTPRU-203ENST00000415600 ITPRIPQ8IWB1 547 aa25.18■■□□□ 1.62
PTPRU-203ENST00000415600 ERO1AQ96HE7 468 aa25.18■■□□□ 1.62
PTPRU-203ENST00000415600 CCL15-CCL14A0A0B4J2E2 113 aa25.17■■□□□ 1.62
PTPRU-203ENST00000415600 TCP10Q12799 353 aa25.17■■□□□ 1.62
PTPRU-203ENST00000415600 CCL15Q16663 113 aa25.17■■□□□ 1.62
PTPRU-203ENST00000415600 FBXO46Q6PJ61 603 aaPredicted RBP25.17■■□□□ 1.62
PTPRU-203ENST00000415600 ERICH6Q7L0X2 663 aa25.17■■□□□ 1.62
PTPRU-203ENST00000415600 PNMA6EA0A0J9YXQ4 647 aa25.16■■□□□ 1.62
PTPRU-203ENST00000415600 CETPP11597 493 aa25.16■■□□□ 1.62
PTPRU-203ENST00000415600 GSTO1P78417 241 aa25.16■■□□□ 1.62
PTPRU-203ENST00000415600 ARHGEF6Q15052 776 aa25.16■■□□□ 1.62
PTPRU-203ENST00000415600 HPS5Q9UPZ3 1129 aa25.16■■□□□ 1.62
PTPRU-203ENST00000415600 TNNQ9UQP3 1299 aa25.16■■□□□ 1.62
PTPRU-203ENST00000415600 LAMB1P07942 1786 aa25.16■■□□□ 1.62
PTPRU-203ENST00000415600 OTOFQ9HC10 1997 aa25.15■■□□□ 1.62
PTPRU-203ENST00000415600 UQCRFS1P1P0C7P4 283 aa25.15■■□□□ 1.62
PTPRU-203ENST00000415600 MS4A1P11836 297 aa25.15■■□□□ 1.62
PTPRU-203ENST00000415600 CRHR2Q13324 411 aa25.15■■□□□ 1.62
PTPRU-203ENST00000415600 SNAPC2Q13487 334 aa25.15■■□□□ 1.62
PTPRU-203ENST00000415600 ZFYVE28Q9HCC9 887 aa25.15■■□□□ 1.62
PTPRU-203ENST00000415600 GAKO14976 1311 aa25.15■■□□□ 1.62
PTPRU-203ENST00000415600 LDHCP07864 332 aa25.14■■□□□ 1.62
PTPRU-203ENST00000415600 MIGA2Q7L4E1 593 aa25.14■■□□□ 1.62
PTPRU-203ENST00000415600 FAM163AQ96GL9 167 aaPredicted RBP25.14■■□□□ 1.62
PTPRU-203ENST00000415600 MS4A4AQ96JQ5 239 aa25.14■■□□□ 1.62
PTPRU-203ENST00000415600 R3HDMLQ9H3Y0 253 aa25.14■■□□□ 1.62
PTPRU-203ENST00000415600 ENTPD3O75355 529 aa25.14■■□□□ 1.61
PTPRU-203ENST00000415600 PPIL2Q13356 520 aa25.14■■□□□ 1.61
PTPRU-203ENST00000415600 SPATA5Q8NB90 893 aa25.14■■□□□ 1.61
PTPRU-203ENST00000415600 ZCCHC17Q9NP64 241 aaKnown RBP25.14■■□□□ 1.61
PTPRU-203ENST00000415600 GPR108Q9NPR9 543 aa25.14■■□□□ 1.61
PTPRU-203ENST00000415600 SNCAIPQ9Y6H5 919 aa25.14■■□□□ 1.61
PTPRU-203ENST00000415600 ATP8B2P98198 1209 aa25.13■■□□□ 1.61
PTPRU-203ENST00000415600 PPATQ06203 517 aa25.13■■□□□ 1.61
PTPRU-203ENST00000415600 TAF1CQ15572 869 aaPredicted RBP25.13■■□□□ 1.61
PTPRU-203ENST00000415600 ZKSCAN4Q969J2 545 aaPredicted RBP25.13■■□□□ 1.61
PTPRU-203ENST00000415600 PTPN18Q99952 460 aa25.13■■□□□ 1.61
PTPRU-203ENST00000415600 IDI2Q9BXS1 227 aa25.13■■□□□ 1.61
PTPRU-203ENST00000415600 MAP4K4O95819 1239 aaPredicted RBP25.12■■□□□ 1.61
PTPRU-203ENST00000415600 NFIAQ12857 509 aa25.12■■□□□ 1.61
PTPRU-203ENST00000415600 POLA2Q14181 598 aa25.12■■□□□ 1.61
PTPRU-203ENST00000415600 CCDC158Q5M9N0 1113 aa25.12■■□□□ 1.61
PTPRU-203ENST00000415600 ZSCAN29Q8IWY8 852 aaPredicted RBP25.12■■□□□ 1.61
PTPRU-203ENST00000415600 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.12■■□□□ 1.61
PTPRU-203ENST00000415600 CNKSR2Q8WXI2 1034 aa25.12■■□□□ 1.61
PTPRU-203ENST00000415600 BRI3BPQ8WY22 251 aa25.12■■□□□ 1.61
PTPRU-203ENST00000415600 TRIM17Q9Y577 477 aa25.12■■□□□ 1.61
PTPRU-203ENST00000415600 MROH7-TTC4A0A0A0MT08 1334 aa25.11■■□□□ 1.61
PTPRU-203ENST00000415600 ARID4AP29374 1257 aaPredicted RBP25.11■■□□□ 1.61
PTPRU-203ENST00000415600 SP3Q02447 781 aa25.11■■□□□ 1.61
PTPRU-203ENST00000415600 SSH3Q8TE77 659 aa25.11■■□□□ 1.61
PTPRU-203ENST00000415600 AK9Q5TCS8 1911 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 SURF6O75683 361 aaKnown RBP25.1■■□□□ 1.61
PTPRU-203ENST00000415600 RGS3P49796 1198 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 HMG20BQ9P0W2 317 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 FAM198AQ9UFP1 575 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 BTDP43251 543 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 MECOMQ03112 1051 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 TTC39AQ5SRH9 613 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 NOL10Q9BSC4 688 aaKnown RBP25.1■■□□□ 1.61
PTPRU-203ENST00000415600 RAI14Q9P0K7 980 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 ZNF112Q9UJU3 913 aa25.1■■□□□ 1.61
PTPRU-203ENST00000415600 MYH2Q9UKX2 1941 aa25.09■■□□□ 1.61
PTPRU-203ENST00000415600 IRF6O14896 467 aa25.09■■□□□ 1.61
PTPRU-203ENST00000415600 LRP2BPQ9P2M1 347 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms