RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
LINC01888-201ENST00000415138 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
LINC01888-201ENST00000415138 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
LINC01888-201ENST00000415138 FSD2A1L4K1 749 aa11.52□□□□□ -0.57
LINC01888-201ENST00000415138 C6orf229H3BNL8 230 aa11.52□□□□□ -0.57
LINC01888-201ENST00000415138 OFD1O75665 1012 aa11.52□□□□□ -0.57
LINC01888-201ENST00000415138 OS9Q13438 667 aaPredicted RBP11.52□□□□□ -0.57
LINC01888-201ENST00000415138 RPAP2Q8IXW5 612 aaPredicted RBP11.52□□□□□ -0.57
LINC01888-201ENST00000415138 ANKRD44Q8N8A2 993 aa11.52□□□□□ -0.57
LINC01888-201ENST00000415138 ZNF594Q96JF6 807 aaPredicted RBP11.52□□□□□ -0.57
LINC01888-201ENST00000415138 EYA3Q99504 573 aa11.52□□□□□ -0.57
LINC01888-201ENST00000415138 C1orf115Q9H7X2 142 aa11.52□□□□□ -0.57
LINC01888-201ENST00000415138 SBF1O95248 1867 aa11.52□□□□□ -0.57
LINC01888-201ENST00000415138 MRE11P49959 708 aa11.51□□□□□ -0.57
LINC01888-201ENST00000415138 ATP8B2P98198 1209 aa11.51□□□□□ -0.57
LINC01888-201ENST00000415138 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01888-201ENST00000415138 G3BP1Q13283 466 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01888-201ENST00000415138 CRBNQ96SW2 442 aa11.51□□□□□ -0.57
LINC01888-201ENST00000415138 PCDHB3Q9Y5E6 796 aa11.51□□□□□ -0.57
LINC01888-201ENST00000415138 DICER1Q9UPY3 1922 aaKnown RBP11.5□□□□□ -0.57
LINC01888-201ENST00000415138 CCDC66A2RUB6 948 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 IGSF3O75054 1194 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 KMT5BQ4FZB7 885 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 METTL24Q5JXM2 366 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 PPP1R18Q6NYC8 613 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 NBPF11Q86T75 865 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 C7orf43Q8WVR3 580 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 JDP2Q8WYK2 163 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
LINC01888-201ENST00000415138 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 ZBTB40Q9NUA8 1239 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 GGA1Q9UJY5 639 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 MINPP1Q9UNW1 487 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 XDHP47989 1333 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
LINC01888-201ENST00000415138 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 LMNB1P20700 586 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 GPSM2P81274 684 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 CHRNDQ07001 517 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 MTX1Q13505 466 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 SIL1Q9H173 461 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 VPS33BQ9H267 617 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 CEP126Q9P2H0 1117 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 LEMD3Q9Y2U8 911 aa11.49□□□□□ -0.57
LINC01888-201ENST00000415138 TTC36A6NLP5 189 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 EYA2O00167 538 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 PPIP5K2O43314 1243 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 SURF6O75683 361 aaKnown RBP11.48□□□□□ -0.57
LINC01888-201ENST00000415138 UFL1O94874 794 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 IL15P40933 162 aaPredicted RBP11.48□□□□□ -0.57
LINC01888-201ENST00000415138 IARSP41252 1262 aaKnown RBP11.48□□□□□ -0.57
LINC01888-201ENST00000415138 RASSF7Q02833 373 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 HSP90AB4PQ58FF6 505 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 TMED8Q6PL24 325 aaPredicted RBP11.48□□□□□ -0.57
LINC01888-201ENST00000415138 EGFL6Q8IUX8 553 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 LARGE2Q8N3Y3 721 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 KLHDC4Q8TBB5 520 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 COPRSQ9NQ92 184 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.48□□□□□ -0.57
LINC01888-201ENST00000415138 RNF181Q9P0P0 153 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
LINC01888-201ENST00000415138 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 PNMA6EA0A0J9YXQ4 647 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 MAFGO15525 162 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 TAF5LO75529 589 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 CIAO1O76071 339 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 GGCXP38435 758 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 PTPN12Q05209 780 aaKnown RBP11.47□□□□□ -0.57
LINC01888-201ENST00000415138 C9orf131Q5VYM1 1079 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 CEP85Q6P2H3 762 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 NIM1KQ8IY84 436 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 HELBQ8NG08 1087 aaPredicted RBP11.47□□□□□ -0.57
LINC01888-201ENST00000415138 PUS3Q9BZE2 481 aaKnown RBP11.47□□□□□ -0.57
LINC01888-201ENST00000415138 ZNF277Q9NRM2 450 aaPredicted RBP11.47□□□□□ -0.57
LINC01888-201ENST00000415138 AKAP2Q9Y2D5 859 aa11.47□□□□□ -0.57
LINC01888-201ENST00000415138 A0A1B0GUL6 1792 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 CFHP08603 1231 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 RFX5P48382 616 aaPredicted RBP11.46□□□□□ -0.57
LINC01888-201ENST00000415138 LRRC24Q50LG9 513 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 VPS37DQ86XT2 251 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 ERC1Q8IUD2 1116 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 TBC1D16Q8TBP0 767 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 SSH3Q8TE77 659 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 PA2G4Q9UQ80 394 aaKnown RBP11.46□□□□□ -0.57
LINC01888-201ENST00000415138 RIPOR2Q9Y4F9 1068 aa11.46□□□□□ -0.57
LINC01888-201ENST00000415138 NFKBIEO00221 500 aa11.45□□□□□ -0.58
LINC01888-201ENST00000415138 PDE8BO95263 885 aa11.45□□□□□ -0.58
LINC01888-201ENST00000415138 IFIT1P09914 478 aaKnown RBP11.45□□□□□ -0.58
LINC01888-201ENST00000415138 SLC5A1P13866 664 aa11.45□□□□□ -0.58
LINC01888-201ENST00000415138 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
LINC01888-201ENST00000415138 UBE4AQ14139 1066 aa11.45□□□□□ -0.58
LINC01888-201ENST00000415138 AOC3Q16853 763 aa11.45□□□□□ -0.58
LINC01888-201ENST00000415138 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
LINC01888-201ENST00000415138 BLOC1S3Q6QNY0 202 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms