RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 RPLP1P05386 114 aaKnown RBP11.26□□□□□ -0.61
TRA2B-204ENST00000414862 USP5P45974 858 aa11.26□□□□□ -0.61
TRA2B-204ENST00000414862 ZC3H6P61129 1189 aaKnown RBP11.26□□□□□ -0.61
TRA2B-204ENST00000414862 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
TRA2B-204ENST00000414862 TTC16Q8NEE8 873 aa11.26□□□□□ -0.61
TRA2B-204ENST00000414862 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
TRA2B-204ENST00000414862 PHRF1Q9P1Y6 1649 aaKnown RBP11.26□□□□□ -0.61
TRA2B-204ENST00000414862 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
TRA2B-204ENST00000414862 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
TRA2B-204ENST00000414862 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
TRA2B-204ENST00000414862 EGFRP00533 1210 aa11.25□□□□□ -0.61
TRA2B-204ENST00000414862 GGNBP2Q9H3C7 697 aa11.25□□□□□ -0.61
TRA2B-204ENST00000414862 DCTN4Q9UJW0 460 aa11.25□□□□□ -0.61
TRA2B-204ENST00000414862 THRAP3Q9Y2W1 955 aaKnown RBP11.25□□□□□ -0.61
TRA2B-204ENST00000414862 SASH3O75995 380 aa11.24□□□□□ -0.61
TRA2B-204ENST00000414862 MAPK1P28482 360 aa11.24□□□□□ -0.61
TRA2B-204ENST00000414862 MAP2K3P46734 347 aa11.24□□□□□ -0.61
TRA2B-204ENST00000414862 MARSP56192 900 aaKnown RBP11.24□□□□□ -0.61
TRA2B-204ENST00000414862 LCE2AQ5TA79 106 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-204ENST00000414862 RAB44Q7Z6P3 723 aaPredicted RBP11.24□□□□□ -0.61
TRA2B-204ENST00000414862 BHMTQ93088 406 aa11.24□□□□□ -0.61
TRA2B-204ENST00000414862 PNMA5Q96PV4 448 aa11.24□□□□□ -0.61
TRA2B-204ENST00000414862 NRKQ7Z2Y5 1582 aa11.24□□□□□ -0.61
TRA2B-204ENST00000414862 TARSP26639 723 aaKnown RBP11.23□□□□□ -0.61
TRA2B-204ENST00000414862 SRSF11Q05519 484 aaKnown RBP11.23□□□□□ -0.61
TRA2B-204ENST00000414862 NEUROD1Q13562 356 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 NUTM2GQ5VZR2 741 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 KRT25Q7Z3Z0 450 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 GJD3Q8N144 294 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 CITED4Q96RK1 184 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 EFCC1Q9HA90 598 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 CPDO75976 1380 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
TRA2B-204ENST00000414862 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
TRA2B-204ENST00000414862 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
TRA2B-204ENST00000414862 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
TRA2B-204ENST00000414862 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.22□□□□□ -0.61
TRA2B-204ENST00000414862 CAMTA1Q9Y6Y1 1673 aa11.22□□□□□ -0.61
TRA2B-204ENST00000414862 A6NHS1 94 aa11.21□□□□□ -0.61
TRA2B-204ENST00000414862 NFKB1P19838 968 aa11.21□□□□□ -0.61
TRA2B-204ENST00000414862 PCBP4P57723 403 aaKnown RBP11.21□□□□□ -0.61
TRA2B-204ENST00000414862 EHHADHQ08426 723 aa11.21□□□□□ -0.61
TRA2B-204ENST00000414862 TMCO4Q5TGY1 634 aa11.21□□□□□ -0.61
TRA2B-204ENST00000414862 ZNF468Q5VIY5 522 aaPredicted RBP11.21□□□□□ -0.61
TRA2B-204ENST00000414862 SYT9Q86SS6 491 aa11.21□□□□□ -0.61
TRA2B-204ENST00000414862 RBCK1Q9BYM8 510 aa11.21□□□□□ -0.61
TRA2B-204ENST00000414862 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.62
TRA2B-204ENST00000414862 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-204ENST00000414862 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-204ENST00000414862 USP19O94966 1318 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 PLSCR1O15162 318 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 ZBTB7AO95365 584 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 ARAFP10398 606 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 CCDC27Q2M243 656 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 PDE12Q6L8Q7 609 aaKnown RBP11.2□□□□□ -0.62
TRA2B-204ENST00000414862 ZNF438Q7Z4V0 828 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 NLRP13Q86W25 1043 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 AVENQ9NQS1 362 aaPredicted RBP11.2□□□□□ -0.62
TRA2B-204ENST00000414862 LMO7Q8WWI1 1683 aa11.2□□□□□ -0.62
TRA2B-204ENST00000414862 CRB1P82279 1406 aa11.19□□□□□ -0.62
TRA2B-204ENST00000414862 RARAP10276 462 aa11.19□□□□□ -0.62
TRA2B-204ENST00000414862 XKR5Q6UX68 686 aa11.19□□□□□ -0.62
TRA2B-204ENST00000414862 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
TRA2B-204ENST00000414862 ZFATQ9P243 1243 aa11.19□□□□□ -0.62
TRA2B-204ENST00000414862 CASZ1Q86V15 1759 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 MYOM1P52179 1685 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 ACEP12821 1306 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 GOLGB1Q14789 3259 aaKnown RBP11.18□□□□□ -0.62
TRA2B-204ENST00000414862 ADH6P28332 368 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 C1QTNF8P60827 252 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 DDB1Q16531 1140 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 FAM129BQ96TA1 746 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 OXCT2Q9BYC2 517 aaPredicted RBP11.18□□□□□ -0.62
TRA2B-204ENST00000414862 KLF15Q9UIH9 416 aa11.18□□□□□ -0.62
TRA2B-204ENST00000414862 LRRC37A3O60309 1634 aa11.17□□□□□ -0.62
TRA2B-204ENST00000414862 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
TRA2B-204ENST00000414862 SIN3BO75182 1162 aa11.17□□□□□ -0.62
TRA2B-204ENST00000414862 SLURP2P0DP57 97 aa11.17□□□□□ -0.62
TRA2B-204ENST00000414862 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
TRA2B-204ENST00000414862 ZSCAN29Q8IWY8 852 aaPredicted RBP11.17□□□□□ -0.62
TRA2B-204ENST00000414862 STK32BQ9NY57 414 aa11.17□□□□□ -0.62
TRA2B-204ENST00000414862 TMEM63CQ9P1W3 806 aa11.17□□□□□ -0.62
TRA2B-204ENST00000414862 PEAK1Q9H792 1746 aa11.16□□□□□ -0.62
TRA2B-204ENST00000414862 MAP3K6O95382 1288 aa11.16□□□□□ -0.62
TRA2B-204ENST00000414862 TTC39BQ5VTQ0 682 aaPredicted RBP11.16□□□□□ -0.62
TRA2B-204ENST00000414862 ACDQ96AP0 544 aa11.16□□□□□ -0.62
TRA2B-204ENST00000414862 ASB16Q96NS5 453 aa11.16□□□□□ -0.62
TRA2B-204ENST00000414862 ABI2Q9NYB9 513 aaPredicted RBP11.16□□□□□ -0.62
TRA2B-204ENST00000414862 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
TRA2B-204ENST00000414862 GDF2Q9UK05 429 aaPredicted RBP11.16□□□□□ -0.62
TRA2B-204ENST00000414862 TOPAZ1Q8N9V7 1692 aa11.15□□□□□ -0.62
TRA2B-204ENST00000414862 MMP20O60882 483 aa11.15□□□□□ -0.62
TRA2B-204ENST00000414862 GCP02774 474 aa11.15□□□□□ -0.62
TRA2B-204ENST00000414862 GOLGA6L1Q8N7Z2 621 aa11.15□□□□□ -0.62
TRA2B-204ENST00000414862 DMRTB1Q96MA1 342 aa11.15□□□□□ -0.62
TRA2B-204ENST00000414862 SYT17Q9BSW7 474 aa11.15□□□□□ -0.62
TRA2B-204ENST00000414862 CDK19Q9BWU1 502 aa11.15□□□□□ -0.62
TRA2B-204ENST00000414862 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.62
TRA2B-204ENST00000414862 MTFR1LQ9H019 292 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms