RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 ZNF592Q92610 1267 aa12.18□□□□□ -0.46
HCG27-202ENST00000414008 RPGRQ92834 1020 aaKnown RBP12.18□□□□□ -0.46
HCG27-202ENST00000414008 KCTD15Q96SI1 283 aaPredicted RBP12.18□□□□□ -0.46
HCG27-202ENST00000414008 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
HCG27-202ENST00000414008 CAPN5O15484 640 aaPredicted RBP12.17□□□□□ -0.46
HCG27-202ENST00000414008 NR1H3Q13133 447 aa12.17□□□□□ -0.46
HCG27-202ENST00000414008 BEND3Q5T5X7 828 aa12.17□□□□□ -0.46
HCG27-202ENST00000414008 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
HCG27-202ENST00000414008 ARHGAP27Q6ZUM4 889 aa12.17□□□□□ -0.46
HCG27-202ENST00000414008 JARID2Q92833 1246 aaPredicted RBP12.17□□□□□ -0.46
HCG27-202ENST00000414008 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
HCG27-202ENST00000414008 ANKRD36CQ5JPF3 1778 aa12.17□□□□□ -0.46
HCG27-202ENST00000414008 ARFGEF2Q9Y6D5 1785 aa12.17□□□□□ -0.46
HCG27-202ENST00000414008 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
HCG27-202ENST00000414008 HOXA10P31260 410 aaPredicted RBP12.16□□□□□ -0.46
HCG27-202ENST00000414008 WDR4P57081 412 aaKnown RBP12.16□□□□□ -0.46
HCG27-202ENST00000414008 GCKRQ14397 625 aa12.16□□□□□ -0.46
HCG27-202ENST00000414008 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
HCG27-202ENST00000414008 CRAMP1Q96RY5 1269 aa12.16□□□□□ -0.46
HCG27-202ENST00000414008 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
HCG27-202ENST00000414008 H7C1W4 665 aa12.15□□□□□ -0.46
HCG27-202ENST00000414008 C21orf2O43822 256 aa12.15□□□□□ -0.46
HCG27-202ENST00000414008 PDE8AO60658 829 aa12.15□□□□□ -0.46
HCG27-202ENST00000414008 SF3B3Q15393 1217 aaKnown RBP12.15□□□□□ -0.46
HCG27-202ENST00000414008 CCDC116Q8IYX3 515 aa12.15□□□□□ -0.46
HCG27-202ENST00000414008 SRCIN1Q9C0H9 1055 aa12.15□□□□□ -0.46
HCG27-202ENST00000414008 PCDHB9Q9Y5E1 797 aa12.15□□□□□ -0.46
HCG27-202ENST00000414008 GOLGB1Q14789 3259 aaKnown RBP12.15□□□□□ -0.46
HCG27-202ENST00000414008 CDHR2Q9BYE9 1310 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 GPR37L1O60883 481 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 BCAR3O75815 825 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 ALDH1L1O75891 902 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 NR3C2P08235 984 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
HCG27-202ENST00000414008 DDX46Q7L014 1031 aaKnown RBP12.14□□□□□ -0.47
HCG27-202ENST00000414008 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
HCG27-202ENST00000414008 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 UTRNP46939 3433 aa12.14□□□□□ -0.47
HCG27-202ENST00000414008 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
HCG27-202ENST00000414008 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
HCG27-202ENST00000414008 TIMP2P16035 220 aa12.13□□□□□ -0.47
HCG27-202ENST00000414008 DHX9Q08211 1270 aaKnown RBP12.13□□□□□ -0.47
HCG27-202ENST00000414008 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
HCG27-202ENST00000414008 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
HCG27-202ENST00000414008 ARHGAP45Q92619 1136 aa12.13□□□□□ -0.47
HCG27-202ENST00000414008 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
HCG27-202ENST00000414008 BRCA1P38398 1863 aaKnown RBP12.12□□□□□ -0.47
HCG27-202ENST00000414008 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
HCG27-202ENST00000414008 GRM8O00222 908 aa12.12□□□□□ -0.47
HCG27-202ENST00000414008 BBOX1O75936 387 aa12.12□□□□□ -0.47
HCG27-202ENST00000414008 ZIC2O95409 532 aaPredicted RBP12.12□□□□□ -0.47
HCG27-202ENST00000414008 ABL2P42684 1182 aa12.12□□□□□ -0.47
HCG27-202ENST00000414008 CASP7P55210 303 aa12.12□□□□□ -0.47
HCG27-202ENST00000414008 GRAPQ13588 217 aa12.12□□□□□ -0.47
HCG27-202ENST00000414008 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
HCG27-202ENST00000414008 GRAPLQ8TC17 118 aaPredicted RBP12.12□□□□□ -0.47
HCG27-202ENST00000414008 FRAT1Q92837 279 aaPredicted RBP12.12□□□□□ -0.47
HCG27-202ENST00000414008 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
HCG27-202ENST00000414008 TNRC6CQ9HCJ0 1690 aaKnown RBP12.12□□□□□ -0.47
HCG27-202ENST00000414008 DLEC1Q9Y238 1755 aa12.12□□□□□ -0.47
HCG27-202ENST00000414008 ABCC4O15439 1325 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 YY1P25490 414 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 CCT4P50991 539 aaKnown RBP12.11□□□□□ -0.47
HCG27-202ENST00000414008 CTSWP56202 376 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 CC2D2BQ6DHV5 1058 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 PLA2G12BQ9BX93 195 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
HCG27-202ENST00000414008 TMX4Q9H1E5 349 aaPredicted RBP12.11□□□□□ -0.47
HCG27-202ENST00000414008 ATP13A2Q9NQ11 1180 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
HCG27-202ENST00000414008 RAD21O60216 631 aa12.1□□□□□ -0.47
HCG27-202ENST00000414008 INTS6LQ5JSJ4 861 aaKnown RBP12.1□□□□□ -0.47
HCG27-202ENST00000414008 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
HCG27-202ENST00000414008 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
HCG27-202ENST00000414008 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
HCG27-202ENST00000414008 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
HCG27-202ENST00000414008 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
HCG27-202ENST00000414008 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
HCG27-202ENST00000414008 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
HCG27-202ENST00000414008 SLX4Q8IY92 1834 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 NFKBIEO00221 500 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
HCG27-202ENST00000414008 RASSF7Q02833 373 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 PPP1R26Q5T8A7 1209 aaPredicted RBP12.09□□□□□ -0.47
HCG27-202ENST00000414008 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 TMC4Q7Z404 712 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 SP8Q8IXZ3 490 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
HCG27-202ENST00000414008 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 ATP6V0A2Q9Y487 856 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 ARFGEF1Q9Y6D6 1849 aa12.09□□□□□ -0.47
HCG27-202ENST00000414008 CSF1RP07333 972 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.48
HCG27-202ENST00000414008 TRIM27P14373 513 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 LMNB1P20700 586 aa12.08□□□□□ -0.48
HCG27-202ENST00000414008 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms