RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 AKAP2Q9Y2D5 859 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 PTPRCP08575 1304 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 ADCY9O60503 1353 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 DYTNA2CJ06 578 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 MEIS3Q99687 375 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 LIMD1Q9UGP4 676 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
SNHG3-201ENST00000413987 HMGN5P82970 282 aaKnown RBP11.01□□□□□ -0.65
SNHG3-201ENST00000413987 TBC1D9Q6ZT07 1266 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 LRP10Q7Z4F1 713 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 RNF34Q969K3 372 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 PRIMPOLQ96LW4 560 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 KIF2CQ99661 725 aa11.01□□□□□ -0.65
SNHG3-201ENST00000413987 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
SNHG3-201ENST00000413987 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
SNHG3-201ENST00000413987 CAND2O75155 1236 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 C1QTNF12Q5T7M4 302 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 CHPFQ8IZ52 775 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 PRR7Q8TB68 274 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 RBSNQ9H1K0 784 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 AS3MTQ9HBK9 375 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 ZBTB40Q9NUA8 1239 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 MAP3K2Q9Y2U5 619 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 NDUFB9Q9Y6M9 179 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 BRWD3Q6RI45 1802 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
SNHG3-201ENST00000413987 CBLBQ13191 982 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 COL19A1Q14993 1142 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
SNHG3-201ENST00000413987 HSP90AB3PQ58FF7 597 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 CAVIN1Q6NZI2 390 aaKnown RBP11□□□□□ -0.65
SNHG3-201ENST00000413987 MYRIPQ8NFW9 859 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
SNHG3-201ENST00000413987 SOS1Q07889 1333 aaPredicted RBP11□□□□□ -0.65
SNHG3-201ENST00000413987 LAMB4A4D0S4 1761 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 TBX3O15119 743 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 ITPK1Q13572 414 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 LONRF1Q17RB8 773 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 C10orf62Q5T681 223 aaPredicted RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 MCTP1Q6DN14 999 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 POTEAQ6S8J7 498 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 ZNF513Q8N8E2 541 aaPredicted RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 RETREG1Q9H6L5 497 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 LMBRD1Q9NUN5 540 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 DIS3Q9Y2L1 958 aaKnown RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 KRT18P05783 430 aaKnown RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 ZSCAN20P17040 1043 aaPredicted RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 TDO2P48775 406 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 KIAA2012Q0VF49 1180 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 SIM2Q14190 667 aaPredicted RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 PLEKHG4Q58EX7 1191 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 LRSAM1Q6UWE0 723 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 CHD1LQ86WJ1 897 aa10.99□□□□□ -0.65
SNHG3-201ENST00000413987 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
SNHG3-201ENST00000413987 SRCAPQ6ZRS2 3230 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 SIK1P57059 783 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 RABEP1Q15276 862 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 CCDC92Q53HC0 331 aaPredicted RBP10.98□□□□□ -0.65
SNHG3-201ENST00000413987 TAF3Q5VWG9 929 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 CCDC89Q8N998 374 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 DNAAF4Q8WXU2 420 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 JARID2Q92833 1246 aaPredicted RBP10.98□□□□□ -0.65
SNHG3-201ENST00000413987 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 ARNT2Q9HBZ2 717 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 HYPKQ9NX55 129 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 ZBTB1Q9Y2K1 713 aa10.98□□□□□ -0.65
SNHG3-201ENST00000413987 TJP1Q07157 1748 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 TGFB3P10600 412 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 ZNF772Q68DY9 489 aaPredicted RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 PPP4R4Q6NUP7 873 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 NBPF5PQ86XG9 351 aaPredicted RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 ZHX1Q9UKY1 873 aaPredicted RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 INTUQ9ULD6 942 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 BTAF1O14981 1849 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 ATP5J2-PTCD1G3V325 749 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 BPNT1O95861 308 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 CYP2E1P05181 493 aaPredicted RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 CYP19A1P11511 503 aaPredicted RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 CDC37Q16543 378 aaPredicted RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 KRT27Q7Z3Y8 459 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
SNHG3-201ENST00000413987 RNPC3Q96LT9 517 aaKnown RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 FAM217BQ9NTX9 383 aaPredicted RBP10.97□□□□□ -0.65
SNHG3-201ENST00000413987 CACNA1FO60840 1977 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 TRIM37O94972 964 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 RRM1P23921 792 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 TRAPPC10P48553 1259 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 RBM6P78332 1123 aaKnown RBP10.96□□□□□ -0.65
SNHG3-201ENST00000413987 BEND3Q5T5X7 828 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms