RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ZGPATQ8N5A5 531 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 RAI14Q9P0K7 980 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 NOP58Q9Y2X3 529 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 MCAMP43121 646 aa12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 MECOMQ03112 1051 aa12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 SPTY2D1Q68D10 685 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 ANKRD13AQ8IZ07 590 aa12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 TLR7Q9NYK1 1049 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-202ENST00000413374 PAPPA2Q9BXP8 1791 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 UQCRFS1P1P0C7P4 283 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 GJA5P36382 358 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 BTDP43251 543 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 TM4SF4P48230 202 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 FAM151AQ8WW52 585 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 GPR108Q9NPR9 543 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 LRP2BPQ9P2M1 347 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 FAM198AQ9UFP1 575 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 DDX19BQ9UMR2 479 aa12.51□□□□□ -0.41
NCKIPSD-202ENST00000413374 SREBF2Q12772 1141 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 PICALMQ13492 652 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 FAM83AQ86UY5 434 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 SIRT2Q8IXJ6 389 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZNF384Q8TF68 577 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 SAGE1Q9NXZ1 904 aa12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 DBNLQ9UJU6 430 aaKnown RBP12.5□□□□□ -0.41
NCKIPSD-202ENST00000413374 MANSC4A6NHS7 340 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZAP70P43403 619 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 RGS3P49796 1198 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 DGKZQ13574 1117 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 VGLL4Q14135 290 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 AACSQ86V21 672 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZSCAN29Q8IWY8 852 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 WRNIP1Q96S55 665 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 CSADQ9Y600 493 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
NCKIPSD-202ENST00000413374 GAKO14976 1311 aa12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 PDS5AQ29RF7 1337 aaKnown RBP12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 CYP2E1P05181 493 aaPredicted RBP12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 RHPN1Q8TCX5 695 aa12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 OTUD5Q96G74 571 aa12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 ABHD8Q96I13 439 aa12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 MCOLN1Q9GZU1 580 aa12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 DDX4Q9NQI0 724 aaKnown RBP12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 THSD7BQ9C0I4 1608 aa12.48□□□□□ -0.41
NCKIPSD-202ENST00000413374 MROH7-TTC4A0A0A0MT08 1334 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 UNCXA6NJT0 531 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 IGF2BP3O00425 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZBTB22O15209 634 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 LDHCP07864 332 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 INPP5BP32019 993 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 INHBEP58166 350 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 GSTO1P78417 241 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 ERC1Q8IUD2 1116 aa12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 PIH1D3Q9NQM4 214 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-202ENST00000413374 DDTLA6NHG4 134 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 HMMRO75330 724 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 RHBDL3P58872 404 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 PDE3AQ14432 1141 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 HSP90AB4PQ58FF6 505 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 NAA16Q6N069 864 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 ZNF296Q8WUU4 475 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 HOOK2Q96ED9 719 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 PTPN18Q99952 460 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 SNCAIPQ9Y6H5 919 aa12.46□□□□□ -0.41
NCKIPSD-202ENST00000413374 CCL15-CCL14A0A0B4J2E2 113 aa12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 GPR25O00155 361 aa12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 ENTPD3O75355 529 aa12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 CCL15Q16663 113 aa12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 SH3RF3Q8TEJ3 882 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms