RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 LRIT3Q3SXY7 679 aa16.27■□□□□ 0.2
PCCA-204ENST00000413170 CYP2C8P10632 490 aa16.26■□□□□ 0.19
PCCA-204ENST00000413170 MAGEA10P43363 369 aaPredicted RBP16.26■□□□□ 0.19
PCCA-204ENST00000413170 PPATQ06203 517 aa16.26■□□□□ 0.19
PCCA-204ENST00000413170 GCKRQ14397 625 aa16.26■□□□□ 0.19
PCCA-204ENST00000413170 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
PCCA-204ENST00000413170 TDHQ8IZJ6 230 aa16.26■□□□□ 0.19
PCCA-204ENST00000413170 PARK7Q99497 189 aaKnown RBP16.26■□□□□ 0.19
PCCA-204ENST00000413170 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
PCCA-204ENST00000413170 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
PCCA-204ENST00000413170 BCRP11274 1271 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 INPP5BP32019 993 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 FLT3LGP49771 235 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 CASP7P55210 303 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 GRIK5Q16478 980 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 MIGA2Q7L4E1 593 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
PCCA-204ENST00000413170 GYG1P46976 350 aa16.24■□□□□ 0.19
PCCA-204ENST00000413170 IFIT5Q13325 482 aaKnown RBP16.24■□□□□ 0.19
PCCA-204ENST00000413170 MOGSQ13724 837 aa16.24■□□□□ 0.19
PCCA-204ENST00000413170 DCAF15Q66K64 600 aa16.24■□□□□ 0.19
PCCA-204ENST00000413170 PAK6Q9NQU5 681 aaPredicted RBP16.24■□□□□ 0.19
PCCA-204ENST00000413170 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
PCCA-204ENST00000413170 RPTORQ8N122 1335 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 GNAI1P63096 354 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 TDRD7Q8NHU6 1098 aaKnown RBP16.23■□□□□ 0.19
PCCA-204ENST00000413170 HOOK2Q96ED9 719 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
PCCA-204ENST00000413170 CRISPLD2Q9H0B8 497 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 TMOD2Q9NZR1 351 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 KCNH4Q9UQ05 1017 aa16.23■□□□□ 0.19
PCCA-204ENST00000413170 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCCA-204ENST00000413170 G2E3Q7L622 706 aa16.22■□□□□ 0.19
PCCA-204ENST00000413170 ZNF594Q96JF6 807 aaPredicted RBP16.22■□□□□ 0.19
PCCA-204ENST00000413170 STK31Q9BXU1 1019 aa16.22■□□□□ 0.19
PCCA-204ENST00000413170 MGAMO43451 1857 aa16.22■□□□□ 0.19
PCCA-204ENST00000413170 TNPO2O14787 897 aaKnown RBP16.21■□□□□ 0.19
PCCA-204ENST00000413170 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
PCCA-204ENST00000413170 CHAF1AQ13111 956 aaPredicted RBP16.21■□□□□ 0.19
PCCA-204ENST00000413170 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.19
PCCA-204ENST00000413170 TEKT1Q969V4 418 aa16.21■□□□□ 0.19
PCCA-204ENST00000413170 FAM161BQ96MY7 647 aa16.21■□□□□ 0.19
PCCA-204ENST00000413170 GUCD1Q96NT3 240 aa16.21■□□□□ 0.19
PCCA-204ENST00000413170 MYH16Q9H6N6 1097 aa16.21■□□□□ 0.19
PCCA-204ENST00000413170 PRDM6Q9NQX0 595 aa16.21■□□□□ 0.19
PCCA-204ENST00000413170 IQSEC3Q9UPP2 1182 aaPredicted RBP16.21■□□□□ 0.19
PCCA-204ENST00000413170 LAMA2P24043 3122 aaKnown RBP16.21■□□□□ 0.19
PCCA-204ENST00000413170 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
PCCA-204ENST00000413170 CAPN2P17655 700 aa16.2■□□□□ 0.18
PCCA-204ENST00000413170 TAF7LQ5H9L4 462 aa16.2■□□□□ 0.18
PCCA-204ENST00000413170 GPAT2Q6NUI2 795 aa16.2■□□□□ 0.18
PCCA-204ENST00000413170 FAM83AQ86UY5 434 aa16.2■□□□□ 0.18
PCCA-204ENST00000413170 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
PCCA-204ENST00000413170 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
PCCA-204ENST00000413170 CNNM1Q9NRU3 951 aa16.2■□□□□ 0.18
PCCA-204ENST00000413170 RPAP1Q9BWH6 1393 aaPredicted RBP16.19■□□□□ 0.18
PCCA-204ENST00000413170 ABCB7O75027 752 aa16.19■□□□□ 0.18
PCCA-204ENST00000413170 FOXO4P98177 505 aa16.19■□□□□ 0.18
PCCA-204ENST00000413170 IRF5Q13568 498 aa16.19■□□□□ 0.18
PCCA-204ENST00000413170 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
PCCA-204ENST00000413170 FAM84BQ96KN1 310 aaPredicted RBP16.19■□□□□ 0.18
PCCA-204ENST00000413170 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
PCCA-204ENST00000413170 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
PCCA-204ENST00000413170 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
PCCA-204ENST00000413170 PRUNE2Q8WUY3 3088 aa16.17■□□□□ 0.18
PCCA-204ENST00000413170 HDLBPQ00341 1268 aaKnown RBP16.17■□□□□ 0.18
PCCA-204ENST00000413170 RALBP1Q15311 655 aa16.17■□□□□ 0.18
PCCA-204ENST00000413170 CCDC57Q2TAC2 916 aa16.17■□□□□ 0.18
PCCA-204ENST00000413170 APOBEC3HQ6NTF7 200 aaKnown RBP16.17■□□□□ 0.18
PCCA-204ENST00000413170 LMBR1LQ6UX01 489 aa16.17■□□□□ 0.18
PCCA-204ENST00000413170 ANKLE1Q8NAG6 615 aa16.17■□□□□ 0.18
PCCA-204ENST00000413170 ZDHHC15Q96MV8 337 aa16.17■□□□□ 0.18
PCCA-204ENST00000413170 C11orf49Q9H6J7 331 aa16.17■□□□□ 0.18
PCCA-204ENST00000413170 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
PCCA-204ENST00000413170 UBE4AQ14139 1066 aa16.16■□□□□ 0.18
PCCA-204ENST00000413170 FKBP1CQ5VVH2 108 aa16.16■□□□□ 0.18
PCCA-204ENST00000413170 GADL1Q6ZQY3 521 aa16.16■□□□□ 0.18
PCCA-204ENST00000413170 VPS37DQ86XT2 251 aa16.16■□□□□ 0.18
PCCA-204ENST00000413170 LINS1Q8NG48 757 aa16.16■□□□□ 0.18
PCCA-204ENST00000413170 SMCR8Q8TEV9 937 aaPredicted RBP16.16■□□□□ 0.18
PCCA-204ENST00000413170 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
PCCA-204ENST00000413170 ZNF112Q9UJU3 913 aa16.16■□□□□ 0.18
PCCA-204ENST00000413170 DDX60LQ5H9U9 1706 aaKnown RBP16.16■□□□□ 0.18
PCCA-204ENST00000413170 TCP10Q12799 353 aa16.15■□□□□ 0.18
PCCA-204ENST00000413170 FLIIQ13045 1269 aa16.15■□□□□ 0.18
PCCA-204ENST00000413170 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
PCCA-204ENST00000413170 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
PCCA-204ENST00000413170 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
PCCA-204ENST00000413170 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
PCCA-204ENST00000413170 COA7Q96BR5 231 aa16.15■□□□□ 0.18
PCCA-204ENST00000413170 CXCL11O14625 94 aa16.14■□□□□ 0.17
PCCA-204ENST00000413170 APAF1O14727 1248 aa16.14■□□□□ 0.17
PCCA-204ENST00000413170 MDM2Q00987 491 aaPredicted RBP16.14■□□□□ 0.17
PCCA-204ENST00000413170 TRIM32Q13049 653 aa16.14■□□□□ 0.17
PCCA-204ENST00000413170 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
PCCA-204ENST00000413170 TBC1D22AQ8WUA7 517 aa16.14■□□□□ 0.17
PCCA-204ENST00000413170 TTC28Q96AY4 2481 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms