RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 DMGDHQ9UI17 866 aaKnown RBP7.51□□□□□ -1.21
LINC00342-201ENST00000412393 KIAA1024Q9UPX6 916 aa7.51□□□□□ -1.21
LINC00342-201ENST00000412393 CDK12Q9NYV4 1490 aaPredicted RBP7.5□□□□□ -1.21
LINC00342-201ENST00000412393 RBM6P78332 1123 aaKnown RBP7.5□□□□□ -1.21
LINC00342-201ENST00000412393 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
LINC00342-201ENST00000412393 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
LINC00342-201ENST00000412393 MUC3BQ9H195 1237 aa7.5□□□□□ -1.21
LINC00342-201ENST00000412393 QTRT2Q9H974 415 aaKnown RBP7.5□□□□□ -1.21
LINC00342-201ENST00000412393 STOML1Q9UBI4 398 aa7.5□□□□□ -1.21
LINC00342-201ENST00000412393 TULP4Q9NRJ4 1543 aa7.5□□□□□ -1.21
LINC00342-201ENST00000412393 PRR36Q9H6K5 1346 aa7.5□□□□□ -1.21
LINC00342-201ENST00000412393 ABCA3Q99758 1704 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 TRPM3Q9HCF6 1732 aaPredicted RBP7.49□□□□□ -1.21
LINC00342-201ENST00000412393 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 ZBTB42B2RXF5 422 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 DHX15O43143 795 aaKnown RBP7.49□□□□□ -1.21
LINC00342-201ENST00000412393 INPP5BP32019 993 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 FNBP4Q8N3X1 1017 aaPredicted RBP7.49□□□□□ -1.21
LINC00342-201ENST00000412393 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
LINC00342-201ENST00000412393 SIN3AQ96ST3 1273 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 SMG9Q9H0W8 520 aaKnown RBP7.49□□□□□ -1.21
LINC00342-201ENST00000412393 TNS3Q68CZ2 1445 aa7.49□□□□□ -1.21
LINC00342-201ENST00000412393 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.49□□□□□ -1.21
LINC00342-201ENST00000412393 SBNO1A3KN83 1393 aa7.48□□□□□ -1.21
LINC00342-201ENST00000412393 ALS2Q96Q42 1657 aa7.48□□□□□ -1.21
LINC00342-201ENST00000412393 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
LINC00342-201ENST00000412393 TRPC5Q9UL62 973 aaPredicted RBP7.48□□□□□ -1.21
LINC00342-201ENST00000412393 TRPM1Q7Z4N2 1603 aa7.48□□□□□ -1.21
LINC00342-201ENST00000412393 QRICH2Q9H0J4 1663 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 GPRASP1Q5JY77 1395 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 RGS12O14924 1447 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 RARAP10276 462 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 SPINK2P20155 84 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 ARSDP51689 593 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 MCM6Q14566 821 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 NGDNQ8NEJ9 315 aaKnown RBP7.47□□□□□ -1.21
LINC00342-201ENST00000412393 NUDT16Q96DE0 195 aaKnown RBP7.47□□□□□ -1.21
LINC00342-201ENST00000412393 CDK19Q9BWU1 502 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 CEP41Q9BYV8 373 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 ZFATQ9P243 1243 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 ATP7BP35670 1465 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 PLCH1Q4KWH8 1693 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 TOPAZ1Q8N9V7 1692 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 NWD2Q9ULI1 1742 aa7.47□□□□□ -1.21
LINC00342-201ENST00000412393 ARHGEF10O15013 1369 aa7.46□□□□□ -1.21
LINC00342-201ENST00000412393 ATRNO75882 1429 aa7.46□□□□□ -1.21
LINC00342-201ENST00000412393 MED26O95402 600 aa7.46□□□□□ -1.22
LINC00342-201ENST00000412393 TGFB1P01137 390 aa7.46□□□□□ -1.22
LINC00342-201ENST00000412393 GLB1P16278 677 aa7.46□□□□□ -1.22
LINC00342-201ENST00000412393 DTX1Q86Y01 620 aa7.46□□□□□ -1.22
LINC00342-201ENST00000412393 SCG3Q8WXD2 468 aaKnown RBP7.46□□□□□ -1.22
LINC00342-201ENST00000412393 RBSNQ9H1K0 784 aa7.46□□□□□ -1.22
LINC00342-201ENST00000412393 CRYBG1Q9Y4K1 1723 aa7.46□□□□□ -1.22
LINC00342-201ENST00000412393 BCL9LQ86UU0 1499 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 ALX3O95076 343 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 WNT11O96014 354 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 EGFRP00533 1210 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 EIF2AK2P19525 551 aaKnown RBP7.45□□□□□ -1.22
LINC00342-201ENST00000412393 IDH3AP50213 366 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 PLAURQ03405 335 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 NFIAQ12857 509 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 ZDHHC13Q8IUH4 622 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 IFT43Q96FT9 208 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
LINC00342-201ENST00000412393 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
LINC00342-201ENST00000412393 BCS1LQ9Y276 419 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 COG6Q9Y2V7 657 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 SLIT2O94813 1529 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 CENPJQ9HC77 1338 aaPredicted RBP7.45□□□□□ -1.22
LINC00342-201ENST00000412393 BRWD3Q6RI45 1802 aa7.45□□□□□ -1.22
LINC00342-201ENST00000412393 ATP9BO43861 1147 aa7.44□□□□□ -1.22
LINC00342-201ENST00000412393 DKK1O94907 266 aa7.44□□□□□ -1.22
LINC00342-201ENST00000412393 HOXD8P13378 290 aaPredicted RBP7.44□□□□□ -1.22
LINC00342-201ENST00000412393 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
LINC00342-201ENST00000412393 SOX18P35713 384 aa7.44□□□□□ -1.22
LINC00342-201ENST00000412393 SEC13P55735 322 aa7.44□□□□□ -1.22
LINC00342-201ENST00000412393 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.44□□□□□ -1.22
LINC00342-201ENST00000412393 UNC5CLQ8IV45 518 aa7.44□□□□□ -1.22
LINC00342-201ENST00000412393 PLD4Q96BZ4 506 aa7.44□□□□□ -1.22
LINC00342-201ENST00000412393 CLSPNQ9HAW4 1339 aa7.44□□□□□ -1.22
LINC00342-201ENST00000412393 COL14A1Q05707 1796 aaKnown RBP7.43□□□□□ -1.22
LINC00342-201ENST00000412393 GLI3P10071 1580 aa7.43□□□□□ -1.22
LINC00342-201ENST00000412393 PHRF1Q9P1Y6 1649 aaKnown RBP7.43□□□□□ -1.22
LINC00342-201ENST00000412393 GRNP28799 593 aaKnown RBP7.43□□□□□ -1.22
LINC00342-201ENST00000412393 SRPK2P78362 688 aaKnown RBP7.43□□□□□ -1.22
LINC00342-201ENST00000412393 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
LINC00342-201ENST00000412393 DIEXFQ68CQ4 756 aaKnown RBP7.43□□□□□ -1.22
LINC00342-201ENST00000412393 IL22RA1Q8N6P7 574 aa7.43□□□□□ -1.22
LINC00342-201ENST00000412393 DBNDD2Q9BQY9 259 aa7.43□□□□□ -1.22
LINC00342-201ENST00000412393 ACEP12821 1306 aa7.43□□□□□ -1.22
LINC00342-201ENST00000412393 NRAPQ86VF7 1730 aa7.43□□□□□ -1.22
LINC00342-201ENST00000412393 ROCK2O75116 1388 aaKnown RBP7.43□□□□□ -1.22
LINC00342-201ENST00000412393 LOC102724428A0A0B4J2F2 783 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 GHRHP01286 108 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 IGFBP4P22692 258 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 SIK1P57059 783 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 MLLT1Q03111 559 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms