RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CDC42EP5Q6NZY7 148 aa21.41■■□□□ 1.02
HSPG2-204ENST00000412328 ZGPATQ8N5A5 531 aaKnown RBP21.41■■□□□ 1.02
HSPG2-204ENST00000412328 ANGEL1Q9UNK9 670 aaKnown RBP21.41■■□□□ 1.02
HSPG2-204ENST00000412328 USP2O75604 605 aaPredicted RBP21.4■■□□□ 1.02
HSPG2-204ENST00000412328 CTCFP49711 727 aaPredicted RBP21.4■■□□□ 1.02
HSPG2-204ENST00000412328 NFIAQ12857 509 aa21.4■■□□□ 1.02
HSPG2-204ENST00000412328 ARMC9Q7Z3E5 817 aa21.4■■□□□ 1.02
HSPG2-204ENST00000412328 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.4■■□□□ 1.02
HSPG2-204ENST00000412328 FAM163AQ96GL9 167 aaPredicted RBP21.4■■□□□ 1.02
HSPG2-204ENST00000412328 MYH1P12882 1939 aa21.39■■□□□ 1.02
HSPG2-204ENST00000412328 MROH7-TTC4A0A0A0MT08 1334 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 UQCRFS1P1P0C7P4 283 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.01
HSPG2-204ENST00000412328 MECOMQ03112 1051 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 AIDAQ96BJ3 306 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 CLMNQ96JQ2 1002 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 PRDM10Q9NQV6 1147 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 FAM198AQ9UFP1 575 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 NAV1Q8NEY1 1877 aa21.39■■□□□ 1.01
HSPG2-204ENST00000412328 TNNI2P48788 182 aa21.38■■□□□ 1.01
HSPG2-204ENST00000412328 TTLL12Q14166 644 aaPredicted RBP21.38■■□□□ 1.01
HSPG2-204ENST00000412328 SUPT20HL1Q3ZLR7 823 aa21.38■■□□□ 1.01
HSPG2-204ENST00000412328 TBC1D9Q6ZT07 1266 aa21.38■■□□□ 1.01
HSPG2-204ENST00000412328 ERC1Q8IUD2 1116 aa21.38■■□□□ 1.01
HSPG2-204ENST00000412328 RHPN1Q8TCX5 695 aa21.38■■□□□ 1.01
HSPG2-204ENST00000412328 NSUN4Q96CB9 384 aaKnown RBP21.38■■□□□ 1.01
HSPG2-204ENST00000412328 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
HSPG2-204ENST00000412328 CSRNP1Q96S65 589 aa21.38■■□□□ 1.01
HSPG2-204ENST00000412328 ABCF2Q9UG63 623 aa21.38■■□□□ 1.01
HSPG2-204ENST00000412328 UNCXA6NJT0 531 aa21.37■■□□□ 1.01
HSPG2-204ENST00000412328 CYP2E1P05181 493 aaPredicted RBP21.37■■□□□ 1.01
HSPG2-204ENST00000412328 LBX1P52954 281 aa21.37■■□□□ 1.01
HSPG2-204ENST00000412328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.37■■□□□ 1.01
HSPG2-204ENST00000412328 CCDC8Q9H0W5 538 aaPredicted RBP21.37■■□□□ 1.01
HSPG2-204ENST00000412328 COL2A1P02458 1487 aaPredicted RBP21.37■■□□□ 1.01
HSPG2-204ENST00000412328 GJA5P36382 358 aa21.36■■□□□ 1.01
HSPG2-204ENST00000412328 RHBDL3P58872 404 aa21.36■■□□□ 1.01
HSPG2-204ENST00000412328 GORABQ5T7V8 394 aa21.36■■□□□ 1.01
HSPG2-204ENST00000412328 DZIP1Q86YF9 867 aaKnown RBP21.36■■□□□ 1.01
HSPG2-204ENST00000412328 IDI2Q9BXS1 227 aa21.36■■□□□ 1.01
HSPG2-204ENST00000412328 TMOD2Q9NZR1 351 aa21.36■■□□□ 1.01
HSPG2-204ENST00000412328 GPR75-ASB3A0A0A6YYF3 556 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 CA12O43570 354 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 PPP1R12BO60237 982 aaPredicted RBP21.35■■□□□ 1.01
HSPG2-204ENST00000412328 WDHD1O75717 1129 aaPredicted RBP21.35■■□□□ 1.01
HSPG2-204ENST00000412328 TTC39AQ5SRH9 613 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 SPRYD7Q5W111 196 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 SPTY2D1Q68D10 685 aaPredicted RBP21.35■■□□□ 1.01
HSPG2-204ENST00000412328 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.35■■□□□ 1.01
HSPG2-204ENST00000412328 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 FAM151AQ8WW52 585 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
HSPG2-204ENST00000412328 IL1RAPL2Q9NP60 686 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 SAGE1Q9NXZ1 904 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 TSKSQ9UJT2 592 aa21.35■■□□□ 1.01
HSPG2-204ENST00000412328 HMMRO75330 724 aa21.34■■□□□ 1.01
HSPG2-204ENST00000412328 BTDP43251 543 aa21.34■■□□□ 1.01
HSPG2-204ENST00000412328 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
HSPG2-204ENST00000412328 CCDC158Q5M9N0 1113 aa21.34■■□□□ 1.01
HSPG2-204ENST00000412328 WNK4Q96J92 1243 aa21.34■■□□□ 1.01
HSPG2-204ENST00000412328 DDX4Q9NQI0 724 aaKnown RBP21.34■■□□□ 1.01
HSPG2-204ENST00000412328 SNRKQ9NRH2 765 aa21.34■■□□□ 1.01
HSPG2-204ENST00000412328 ZAP70P43403 619 aa21.33■■□□□ 1.01
HSPG2-204ENST00000412328 IREB2P48200 963 aaKnown RBP21.33■■□□□ 1.01
HSPG2-204ENST00000412328 ADGRA1Q86SQ6 560 aa21.33■■□□□ 1.01
HSPG2-204ENST00000412328 AACSQ86V21 672 aa21.33■■□□□ 1.01
HSPG2-204ENST00000412328 ZFPM1Q8IX07 1006 aa21.33■■□□□ 1.01
HSPG2-204ENST00000412328 ANKRD13AQ8IZ07 590 aa21.33■■□□□ 1.01
HSPG2-204ENST00000412328 KIF1BPQ96EK5 621 aa21.33■■□□□ 1.01
HSPG2-204ENST00000412328 PIH1D3Q9NQM4 214 aaKnown RBP21.33■■□□□ 1.01
HSPG2-204ENST00000412328 USP40Q9NVE5 1235 aa21.33■■□□□ 1.01
HSPG2-204ENST00000412328 ZBTB48P10074 688 aaPredicted RBP21.32■■□□□ 1
HSPG2-204ENST00000412328 SH3BP5LQ7L8J4 393 aa21.32■■□□□ 1
HSPG2-204ENST00000412328 RNF186Q9NXI6 227 aa21.32■■□□□ 1
HSPG2-204ENST00000412328 NDUFB9Q9Y6M9 179 aa21.32■■□□□ 1
HSPG2-204ENST00000412328 TM4SF4P48230 202 aa21.31■■□□□ 1
HSPG2-204ENST00000412328 RGS3P49796 1198 aa21.31■■□□□ 1
HSPG2-204ENST00000412328 VGLL4Q14135 290 aa21.31■■□□□ 1
HSPG2-204ENST00000412328 REM2Q8IYK8 340 aaPredicted RBP21.31■■□□□ 1
HSPG2-204ENST00000412328 BEGAINQ9BUH8 593 aa21.31■■□□□ 1
HSPG2-204ENST00000412328 SNCAIPQ9Y6H5 919 aa21.31■■□□□ 1
HSPG2-204ENST00000412328 LOC285556D6RIA3 1793 aa21.31■■□□□ 1
HSPG2-204ENST00000412328 RAB11FIP3O75154 756 aa21.3■■□□□ 1
HSPG2-204ENST00000412328 ENTPD3O75355 529 aa21.3■■□□□ 1
HSPG2-204ENST00000412328 TCP10Q12799 353 aa21.3■■□□□ 1
HSPG2-204ENST00000412328 MKRN3Q13064 507 aaKnown RBP21.3■■□□□ 1
HSPG2-204ENST00000412328 SLF2Q8IX21 1173 aa21.3■■□□□ 1
HSPG2-204ENST00000412328 IGSF3O75054 1194 aa21.29■■□□□ 1
HSPG2-204ENST00000412328 CNKSR2Q8WXI2 1034 aa21.29■■□□□ 1
HSPG2-204ENST00000412328 ANTXR1Q9H6X2 564 aa21.29■■□□□ 1
HSPG2-204ENST00000412328 RAI14Q9P0K7 980 aa21.29■■□□□ 1
HSPG2-204ENST00000412328 MYH8P13535 1937 aa21.28■■□□□ 1
HSPG2-204ENST00000412328 ZSWIM8A7E2V4 1837 aa21.28■■□□□ 1
HSPG2-204ENST00000412328 APBB1O00213 710 aa21.28■■□□□ 1
HSPG2-204ENST00000412328 NPM3O75607 178 aaKnown RBP21.28■■□□□ 1
HSPG2-204ENST00000412328 CFHR5Q9BXR6 569 aa21.28■■□□□ 1
HSPG2-204ENST00000412328 ELP3Q9H9T3 547 aa21.28■■□□□ 1
HSPG2-204ENST00000412328 ZNF112Q9UJU3 913 aa21.28■■□□□ 1
HSPG2-204ENST00000412328 PCDHB15Q9Y5E8 787 aa21.28■■□□□ 1
HSPG2-204ENST00000412328 BAZ2AQ9UIF9 1905 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms