RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.37□□□□□ -1.87
RNU2-55P-201ENST00000411146 ZNF124Q15973 351 aa3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 CPSF6Q16630 551 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 ZNF648Q5T619 568 aaPredicted RBP3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 KIAA0319Q5VV43 1072 aa3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 OGFOD3Q6PK18 319 aa3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 GLIS3Q8NEA6 775 aa3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 EPS8L3Q8TE67 593 aaKnown RBP3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 DISC1Q9NRI5 854 aa3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 BSDC1Q9NW68 430 aaPredicted RBP3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 ANGEL1Q9UNK9 670 aaKnown RBP3.36□□□□□ -1.87
RNU2-55P-201ENST00000411146 GPR182O15218 404 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 TMPRSS2O15393 492 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 B3GALT4O96024 378 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 CYP11A1P05108 521 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 CD8BP10966 210 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 ITPKAP23677 461 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 USP5P45974 858 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 SF3B2Q13435 895 aaKnown RBP3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 DUSP27Q5VZP5 1158 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 UBE3DQ7Z6J8 389 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 VSIG10LQ86VR7 867 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 GIMAP7Q8NHV1 300 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 FBXL18Q96ME1 805 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 NIF3L1Q9GZT8 377 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 EHD4Q9H223 541 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 ABCB6Q9NP58 842 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 PLAGL2Q9UPG8 496 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 PCDHGC5Q9Y5F6 944 aa3.35□□□□□ -1.87
RNU2-55P-201ENST00000411146 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 H3BRB1 525 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 NEFMP07197 916 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 FAM87AP0C7U9 286 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 HCLS1P14317 486 aaPredicted RBP3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 EHHADHQ08426 723 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 MAP7Q14244 749 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 PDE3AQ14432 1141 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 ZNF792Q3KQV3 632 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 CCDC74AQ96AQ1 378 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 ASIC4Q96FT7 647 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 FANCD2OSQ96PS1 177 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 CORO1BQ9BR76 489 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 METTL22Q9BUU2 404 aaPredicted RBP3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 TUT1Q9H6E5 874 aaKnown RBP3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 PRDM7Q9NQW5 492 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 MBNL3Q9NUK0 354 aaKnown RBP3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 CRIM1Q9NZV1 1036 aa3.34□□□□□ -1.87
RNU2-55P-201ENST00000411146 TMEM238LA0A1B0GVL6 79 aa3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 EIF1AYO14602 144 aaKnown RBP3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 RNASE1P07998 156 aaKnown RBP3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 JUNBP17275 347 aaPredicted RBP3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 GRM2Q14416 872 aa3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 TTLL4Q14679 1199 aa3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 PDZD3Q86UT5 571 aa3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 HEXIM2Q96MH2 286 aaKnown RBP3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 FAM129BQ96TA1 746 aa3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 BRPF3Q9ULD4 1205 aa3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 CNTNAP4Q9C0A0 1308 aa3.33□□□□□ -1.88
RNU2-55P-201ENST00000411146 RNGTTO60942 597 aaKnown RBP3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 CPNE3O75131 537 aaKnown RBP3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 PPP1R15AO75807 674 aaPredicted RBP3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 FCGRTP55899 365 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 PLCL1Q15111 1095 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 RASIP1Q5U651 963 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 FAM214BQ7L5A3 538 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 GRIN3AQ8TCU5 1115 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 SLC5A6Q9Y289 635 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 GTF3C3Q9Y5Q9 886 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 CSADQ9Y600 493 aa3.32□□□□□ -1.88
RNU2-55P-201ENST00000411146 GADD45BO75293 160 aaPredicted RBP3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 OXCT1P55809 520 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 GLYCTKQ8IVS8 523 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 SMYD4Q8IYR2 804 aaPredicted RBP3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 LRRN4CLQ8ND94 238 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 AGBL5Q8NDL9 886 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 KCNB2Q92953 911 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 ISL2Q96A47 359 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 SETDB2Q96T68 719 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 DUSP23Q9BVJ7 150 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 YIPF2Q9BWQ6 316 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 KCNK12Q9HB15 430 aa3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU2-55P-201ENST00000411146 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 PAGE1O75459 146 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 GSTP1P09211 210 aaKnown RBP3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 FUT4P22083 530 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 ID3Q02535 119 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 AOC3Q16853 763 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 KIF4BQ2VIQ3 1234 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 FYB2Q5VWT5 728 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 PRPF40BQ6NWY9 871 aaKnown RBP3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 TXNDC2Q86VQ3 553 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 NETO1Q8TDF5 533 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 CSRNP1Q96S65 589 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 EGFL7Q9UHF1 273 aa3.3□□□□□ -1.88
RNU2-55P-201ENST00000411146 ITIH2P19823 946 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 BMP6P22004 513 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 NTF4P34130 210 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 CYP27A1Q02318 531 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms