RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 OTOFQ9HC10 1997 aa21.82■■□□□ 1.08
LSM5-204ENST00000409909 NFIAQ12857 509 aa21.82■■□□□ 1.08
LSM5-204ENST00000409909 ANKRD13AQ8IZ07 590 aa21.82■■□□□ 1.08
LSM5-204ENST00000409909 SPATA5Q8NB90 893 aa21.82■■□□□ 1.08
LSM5-204ENST00000409909 COG6Q9Y2V7 657 aa21.82■■□□□ 1.08
LSM5-204ENST00000409909 MYH2Q9UKX2 1941 aa21.82■■□□□ 1.08
LSM5-204ENST00000409909 GJA5P36382 358 aa21.81■■□□□ 1.08
LSM5-204ENST00000409909 MCAMP43121 646 aa21.81■■□□□ 1.08
LSM5-204ENST00000409909 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.81■■□□□ 1.08
LSM5-204ENST00000409909 TBC1D9Q6ZT07 1266 aa21.81■■□□□ 1.08
LSM5-204ENST00000409909 ZNF384Q8TF68 577 aa21.81■■□□□ 1.08
LSM5-204ENST00000409909 DBNDD2Q9BQY9 259 aa21.81■■□□□ 1.08
LSM5-204ENST00000409909 USP40Q9NVE5 1235 aa21.81■■□□□ 1.08
LSM5-204ENST00000409909 GAKO14976 1311 aa21.8■■□□□ 1.08
LSM5-204ENST00000409909 ZBTB48P10074 688 aaPredicted RBP21.8■■□□□ 1.08
LSM5-204ENST00000409909 SPTY2D1Q68D10 685 aaPredicted RBP21.8■■□□□ 1.08
LSM5-204ENST00000409909 DZIP1Q86YF9 867 aaKnown RBP21.8■■□□□ 1.08
LSM5-204ENST00000409909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.8■■□□□ 1.082e-7■□□□□ 9.7
LSM5-204ENST00000409909 FAM151AQ8WW52 585 aa21.8■■□□□ 1.08
LSM5-204ENST00000409909 FAM163AQ96GL9 167 aaPredicted RBP21.8■■□□□ 1.08
LSM5-204ENST00000409909 ELP3Q9H9T3 547 aa21.8■■□□□ 1.08
LSM5-204ENST00000409909 FAM198AQ9UFP1 575 aa21.8■■□□□ 1.08
LSM5-204ENST00000409909 UQCRFS1P1P0C7P4 283 aa21.79■■□□□ 1.08
LSM5-204ENST00000409909 MAP3K9P80192 1104 aa21.79■■□□□ 1.08
LSM5-204ENST00000409909 MECOMQ03112 1051 aa21.79■■□□□ 1.08
LSM5-204ENST00000409909 SREBF2Q12772 1141 aa21.79■■□□□ 1.08
LSM5-204ENST00000409909 TCP10Q12799 353 aa21.79■■□□□ 1.08
LSM5-204ENST00000409909 ZBTB40Q9NUA8 1239 aa21.79■■□□□ 1.08
LSM5-204ENST00000409909 RPAP1Q9BWH6 1393 aaPredicted RBP21.78■■□□□ 1.08
LSM5-204ENST00000409909 TBC1D8O95759 1140 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 VGLL4Q14135 290 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 C20orf194Q5TEA3 1177 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 ERICH6Q7L0X2 663 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 ZFPM1Q8IX07 1006 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 DDX19BQ9UMR2 479 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 EXOC6BQ9Y2D4 811 aa21.78■■□□□ 1.08
LSM5-204ENST00000409909 MANSC4A6NHS7 340 aaPredicted RBP21.77■■□□□ 1.08
LSM5-204ENST00000409909 MIGA2Q7L4E1 593 aa21.77■■□□□ 1.08
LSM5-204ENST00000409909 SIRT2Q8IXJ6 389 aa21.77■■□□□ 1.08
LSM5-204ENST00000409909 EAF2Q96CJ1 260 aaPredicted RBP21.77■■□□□ 1.08
LSM5-204ENST00000409909 SNRKQ9NRH2 765 aa21.77■■□□□ 1.08
LSM5-204ENST00000409909 TLR7Q9NYK1 1049 aaKnown RBP21.77■■□□□ 1.08
LSM5-204ENST00000409909 DBNLQ9UJU6 430 aaKnown RBP21.77■■□□□ 1.08
LSM5-204ENST00000409909 LAMB1P07942 1786 aa21.76■■□□□ 1.07
LSM5-204ENST00000409909 TTC39AQ5SRH9 613 aa21.76■■□□□ 1.07
LSM5-204ENST00000409909 SLF2Q8IX21 1173 aa21.76■■□□□ 1.07
LSM5-204ENST00000409909 NSUN4Q96CB9 384 aaKnown RBP21.76■■□□□ 1.07
LSM5-204ENST00000409909 OPTNQ96CV9 577 aa21.76■■□□□ 1.07
LSM5-204ENST00000409909 ABHD8Q96I13 439 aa21.76■■□□□ 1.07
LSM5-204ENST00000409909 CCDC8Q9H0W5 538 aaPredicted RBP21.76■■□□□ 1.07
LSM5-204ENST00000409909 R3HDMLQ9H3Y0 253 aa21.76■■□□□ 1.07
LSM5-204ENST00000409909 MROH7-TTC4A0A0A0MT08 1334 aa21.76■■□□□ 1.07
LSM5-204ENST00000409909 BTDP43251 543 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 INHBEP58166 350 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 CCDC158Q5M9N0 1113 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 IFNL1Q8IU54 200 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 ZKSCAN4Q969J2 545 aaPredicted RBP21.75■■□□□ 1.07
LSM5-204ENST00000409909 HOOK2Q96ED9 719 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 WRNIP1Q96S55 665 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 IDI2Q9BXS1 227 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 MCOLN1Q9GZU1 580 aa21.75■■□□□ 1.07
LSM5-204ENST00000409909 RFX7Q2KHR2 1363 aa21.74■■□□□ 1.07
LSM5-204ENST00000409909 GPR75-ASB3A0A0A6YYF3 556 aa21.74■■□□□ 1.07
LSM5-204ENST00000409909 IGF2BP3O00425 579 aaKnown RBP eCLIP21.74■■□□□ 1.07
LSM5-204ENST00000409909 RGS3P49796 1198 aa21.74■■□□□ 1.07
LSM5-204ENST00000409909 RPAP2Q8IXW5 612 aaPredicted RBP21.74■■□□□ 1.07
LSM5-204ENST00000409909 ZNF512BQ96KM6 892 aaPredicted RBP21.74■■□□□ 1.07
LSM5-204ENST00000409909 RAI14Q9P0K7 980 aa21.74■■□□□ 1.07
LSM5-204ENST00000409909 CSADQ9Y600 493 aa21.74■■□□□ 1.07
LSM5-204ENST00000409909 SNCAIPQ9Y6H5 919 aa21.74■■□□□ 1.07
LSM5-204ENST00000409909 AK9Q5TCS8 1911 aa21.74■■□□□ 1.07
LSM5-204ENST00000409909 WDHD1O75717 1129 aaPredicted RBP21.73■■□□□ 1.07
LSM5-204ENST00000409909 RHBDL3P58872 404 aa21.73■■□□□ 1.07
LSM5-204ENST00000409909 DGKZQ13574 1117 aa21.73■■□□□ 1.07
LSM5-204ENST00000409909 PDE3AQ14432 1141 aa21.73■■□□□ 1.07
LSM5-204ENST00000409909 DCAF15Q66K64 600 aa21.73■■□□□ 1.07
LSM5-204ENST00000409909 MS4A4AQ96JQ5 239 aa21.73■■□□□ 1.07
LSM5-204ENST00000409909 PTPN18Q99952 460 aa21.73■■□□□ 1.07
LSM5-204ENST00000409909 CFHR5Q9BXR6 569 aa21.73■■□□□ 1.07
LSM5-204ENST00000409909 DDX4Q9NQI0 724 aaKnown RBP21.73■■□□□ 1.07
LSM5-204ENST00000409909 TESPA1A2RU30 521 aaPredicted RBP21.72■■□□□ 1.07
LSM5-204ENST00000409909 ENTPD3O75355 529 aa21.72■■□□□ 1.07
LSM5-204ENST00000409909 CYP2E1P05181 493 aaPredicted RBP21.72■■□□□ 1.07
LSM5-204ENST00000409909 SH3BP5LQ7L8J4 393 aa21.72■■□□□ 1.07
LSM5-204ENST00000409909 ERC1Q8IUD2 1116 aa21.72■■□□□ 1.07
LSM5-204ENST00000409909 ZNF296Q8WUU4 475 aaPredicted RBP21.72■■□□□ 1.07
LSM5-204ENST00000409909 ZNF341Q9BYN7 854 aa21.72■■□□□ 1.07
LSM5-204ENST00000409909 LRP2BPQ9P2M1 347 aa21.72■■□□□ 1.07
LSM5-204ENST00000409909 SPDYE5A6NIY4 337 aa21.71■■□□□ 1.07
LSM5-204ENST00000409909 ALDH1A1P00352 501 aa21.71■■□□□ 1.07
LSM5-204ENST00000409909 INPP5BP32019 993 aa21.71■■□□□ 1.07
LSM5-204ENST00000409909 GSTO1P78417 241 aa21.71■■□□□ 1.07
LSM5-204ENST00000409909 OTUD5Q96G74 571 aa21.71■■□□□ 1.07
LSM5-204ENST00000409909 ZNF112Q9UJU3 913 aa21.71■■□□□ 1.07
LSM5-204ENST00000409909 GPR25O00155 361 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 LDHCP07864 332 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 ZAP70P43403 619 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 HSP90AB4PQ58FF6 505 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 NOM1Q5C9Z4 860 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms