RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ARAP2Q8WZ64 1704 aa8.9□□□□□ -0.98
CXCR4-202ENST00000409817 NEK1Q96PY6 1258 aa8.9□□□□□ -0.98
CXCR4-202ENST00000409817 HMX1Q9NP08 348 aaPredicted RBP8.9□□□□□ -0.98
CXCR4-202ENST00000409817 CTNNA3Q9UI47 895 aa8.9□□□□□ -0.98
CXCR4-202ENST00000409817 SMC3Q9UQE7 1217 aa8.9□□□□□ -0.98
CXCR4-202ENST00000409817 NIP7Q9Y221 180 aaKnown RBP eCLIP8.9□□□□□ -0.98
CXCR4-202ENST00000409817 ATP6V1DQ9Y5K8 247 aa8.9□□□□□ -0.98
CXCR4-202ENST00000409817 KCNQ2O43526 872 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 SLC5A1P13866 664 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 FGFR2P21802 821 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 ARID4AP29374 1257 aaPredicted RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 IGHMBP2P38935 993 aaKnown RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 FKBP4Q02790 459 aaKnown RBP eCLIP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 FUT2Q10981 343 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 PKP1Q13835 747 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 SAMD7Q7Z3H4 446 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 APPBP2Q92624 585 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 MPHOSPH8Q99549 860 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 DDX60Q8IY21 1712 aaKnown RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 FSD2A1L4K1 749 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 GOLGA6L3A6NEY3 463 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 PDCP20941 246 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 HMGB2P26583 209 aaKnown RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 ADORA1P30542 326 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 CTDSPL2Q05D32 466 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 MCTP1Q6DN14 999 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 CDC5LQ99459 802 aaKnown RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 LMBRD1Q9NUN5 540 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 NDUFB9Q9Y6M9 179 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 DDX49Q9Y6V7 483 aaKnown RBP8.89□□□□□ -0.99
CXCR4-202ENST00000409817 MAST3O60307 1309 aa8.89□□□□□ -0.99
CXCR4-202ENST00000409817 ATRNO75882 1429 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 SCN7AQ01118 1682 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 MYH7P12883 1935 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 BHMG1C9JSJ3 638 aaPredicted RBP8.88□□□□□ -0.99
CXCR4-202ENST00000409817 RPS6KA4O75676 772 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 MBD3O95983 291 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 CYP21A2P08686 494 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 HSPD1P10809 573 aaKnown RBP8.88□□□□□ -0.99
CXCR4-202ENST00000409817 ABL2P42684 1182 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 UBE3CQ15386 1083 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 SF3B3Q15393 1217 aaKnown RBP8.88□□□□□ -0.99
CXCR4-202ENST00000409817 LINC00116Q8NCU8 138 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 SEC62Q99442 399 aaKnown RBP8.88□□□□□ -0.99
CXCR4-202ENST00000409817 TRIM34Q9BYJ4 488 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 NYXQ9GZU5 481 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 AKAP11Q9UKA4 1901 aa8.88□□□□□ -0.99
CXCR4-202ENST00000409817 BTAF1O14981 1849 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 STX6O43752 255 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
CXCR4-202ENST00000409817 HCLS1P14317 486 aaPredicted RBP8.87□□□□□ -0.99
CXCR4-202ENST00000409817 CPA1P15085 419 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 ZAP70P43403 619 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 IRF5Q13568 498 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 ME3Q16798 604 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 SLC10A5Q5PT55 438 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 CCDC102BQ68D86 513 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 FBXL16Q8N461 479 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 MARVELD3Q96A59 401 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 NARFQ9UHQ1 456 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 SERPINA10Q9UK55 444 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 MCAMP43121 646 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 MRE11P49959 708 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 MTMR2Q13614 643 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 TOB2Q14106 344 aaPredicted RBP8.87□□□□□ -0.99
CXCR4-202ENST00000409817 CCDC129Q6ZRS4 1044 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 DHX32Q7L7V1 743 aaKnown RBP8.87□□□□□ -0.99
CXCR4-202ENST00000409817 CCDC83Q8IWF9 413 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
CXCR4-202ENST00000409817 POTEB3A0JP26 581 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 CFHP08603 1231 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 SYT1P21579 422 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 GJB2P29033 226 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 ADD2P35612 726 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 PBX2P40425 430 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 SCARF1Q14162 830 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 IMMTQ16891 758 aaKnown RBP8.86□□□□□ -0.99
CXCR4-202ENST00000409817 WASHC4Q2M389 1173 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 MEX3CQ5U5Q3 659 aaKnown RBP8.86□□□□□ -0.99
CXCR4-202ENST00000409817 POTEBQ6S5H4 581 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 TMEM87AQ8NBN3 555 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 OSBP2Q969R2 916 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 CCDC97Q96F63 343 aaPredicted RBP8.86□□□□□ -0.99
CXCR4-202ENST00000409817 LLPHQ9BRT6 129 aaKnown RBP8.86□□□□□ -0.99
CXCR4-202ENST00000409817 AGXT2Q9BYV1 514 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 TRPC5Q9UL62 973 aaPredicted RBP8.86□□□□□ -0.99
CXCR4-202ENST00000409817 LY75O60449 1722 aa8.86□□□□□ -0.99
CXCR4-202ENST00000409817 M0R2C6 588 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 LARGE1O95461 756 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 ZNF687Q8N1G0 1237 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 GZF1Q9H116 711 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 RTCBQ9Y3I0 505 aaKnown RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 KIF3AQ9Y496 699 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 ZMYM6O95789 1325 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms