RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 MPNDQ8N594 471 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
LIMS2-206ENST00000409754 NSFL1CQ9UNZ2 370 aaKnown RBP16.67■□□□□ 0.26
LIMS2-206ENST00000409754 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
LIMS2-206ENST00000409754 IGSF3O75054 1194 aa16.66■□□□□ 0.26
LIMS2-206ENST00000409754 CYP7A1P22680 504 aa16.66■□□□□ 0.26
LIMS2-206ENST00000409754 TXNRD3Q86VQ6 643 aa16.66■□□□□ 0.26
LIMS2-206ENST00000409754 NECAB1Q8N987 351 aa16.66■□□□□ 0.26
LIMS2-206ENST00000409754 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
LIMS2-206ENST00000409754 LMNB1P20700 586 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 ATP2B4P23634 1241 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 FGD1P98174 961 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 NCOA7Q8NI08 942 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 BRF1Q92994 677 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 PSME4Q14997 1843 aa16.65■□□□□ 0.26
LIMS2-206ENST00000409754 PDIA4P13667 645 aaKnown RBP16.64■□□□□ 0.25
LIMS2-206ENST00000409754 GJB2P29033 226 aa16.64■□□□□ 0.25
LIMS2-206ENST00000409754 AOC3Q16853 763 aa16.64■□□□□ 0.25
LIMS2-206ENST00000409754 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-206ENST00000409754 LCORLQ8N3X6 602 aa16.64■□□□□ 0.25
LIMS2-206ENST00000409754 GTF3C6Q969F1 213 aa16.64■□□□□ 0.25
LIMS2-206ENST00000409754 NACAP1Q9BZK3 213 aa16.64■□□□□ 0.25
LIMS2-206ENST00000409754 EPB41L4AQ9HCS5 686 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-206ENST00000409754 MYH13Q9UKX3 1938 aa16.64■□□□□ 0.25
LIMS2-206ENST00000409754 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 TRAK2O60296 914 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 UFL1O94874 794 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 MCM5P33992 734 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
LIMS2-206ENST00000409754 NAA16Q6N069 864 aaPredicted RBP16.63■□□□□ 0.25
LIMS2-206ENST00000409754 ZNF804AQ7Z570 1209 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
LIMS2-206ENST00000409754 LRRC2Q9BYS8 371 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 NBPF3Q9H094 633 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 NAPBQ9H115 298 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 STX6O43752 255 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 PFKFB2O60825 505 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 SYT1P21579 422 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 KIAA2012Q0VF49 1180 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 ADGRA1Q86SQ6 560 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 TDRD7Q8NHU6 1098 aaKnown RBP16.63■□□□□ 0.25
LIMS2-206ENST00000409754 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 SLC4A4Q9Y6R1 1079 aa16.63■□□□□ 0.25
LIMS2-206ENST00000409754 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
LIMS2-206ENST00000409754 EVCP57679 992 aa16.62■□□□□ 0.25
LIMS2-206ENST00000409754 TRDNQ13061 729 aa16.62■□□□□ 0.25
LIMS2-206ENST00000409754 SKOR2Q2VWA4 1001 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-206ENST00000409754 GRIPAP1Q4V328 841 aa16.62■□□□□ 0.25
LIMS2-206ENST00000409754 SPTY2D1Q68D10 685 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-206ENST00000409754 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
LIMS2-206ENST00000409754 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
LIMS2-206ENST00000409754 NSUN4Q96CB9 384 aaKnown RBP16.62■□□□□ 0.25
LIMS2-206ENST00000409754 ZNF274Q96GC6 653 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-206ENST00000409754 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
LIMS2-206ENST00000409754 ZNF541Q9H0D2 1346 aa16.62■□□□□ 0.25
LIMS2-206ENST00000409754 YDJCA8MPS7 323 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 PRC1O43663 620 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 PRKAB2O43741 272 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 CHAF1AQ13111 956 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-206ENST00000409754 STK3Q13188 491 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 GSE1Q14687 1217 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 ZNF384Q8TF68 577 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
LIMS2-206ENST00000409754 MAST2Q6P0Q8 1798 aa16.6■□□□□ 0.25
LIMS2-206ENST00000409754 C6orf229H3BNL8 230 aa16.6■□□□□ 0.25
LIMS2-206ENST00000409754 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
LIMS2-206ENST00000409754 ZSCAN22P10073 491 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-206ENST00000409754 PDCP20941 246 aa16.6■□□□□ 0.25
LIMS2-206ENST00000409754 ANTXR2P58335 489 aa16.6■□□□□ 0.25
LIMS2-206ENST00000409754 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
LIMS2-206ENST00000409754 LLPHQ9BRT6 129 aaKnown RBP16.6■□□□□ 0.25
LIMS2-206ENST00000409754 RIMBP2O15034 1052 aa16.59■□□□□ 0.25
LIMS2-206ENST00000409754 TDO2P48775 406 aa16.59■□□□□ 0.25
LIMS2-206ENST00000409754 MECOMQ03112 1051 aa16.59■□□□□ 0.25
LIMS2-206ENST00000409754 SCRN1Q12765 414 aa16.59■□□□□ 0.25
LIMS2-206ENST00000409754 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-206ENST00000409754 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
LIMS2-206ENST00000409754 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-206ENST00000409754 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
LIMS2-206ENST00000409754 FZD9O00144 591 aa16.59■□□□□ 0.25
LIMS2-206ENST00000409754 IL1R1P14778 569 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 PRDX5P30044 214 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 PDIA3P30101 505 aaKnown RBP16.58■□□□□ 0.24
LIMS2-206ENST00000409754 GIMAP6Q6P9H5 292 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 SUPT20HQ8NEM7 779 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 CNNM2Q9H8M5 875 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 DBNDD1Q9H9R9 158 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 CD209Q9NNX6 404 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 MTMR6Q9Y217 621 aa16.58■□□□□ 0.24
LIMS2-206ENST00000409754 F13A1P00488 732 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms