RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 HSPD1P10809 573 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 GNAT2P19087 354 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 STOX1Q6ZVD7 989 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 TTLL6Q8N841 843 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 DPF2Q92785 391 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 CCDC8Q9H0W5 538 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 SNX14Q9Y5W7 946 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 IFIT1P09914 478 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 VEGFAP15692 232 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 HIBADHP31937 336 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 FAM177A1Q8N128 213 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 FAM227BQ96M60 508 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 IFIT2P09913 472 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 GHRHRQ02643 423 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 ZNF804AQ7Z570 1209 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 SGMS1Q86VZ5 419 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 ZNF112Q9UJU3 913 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 UNCXA6NJT0 531 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 MECOMQ03112 1051 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 COL9A3Q14050 684 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 SEC23AQ15436 765 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 ZSCAN25Q6NSZ9 544 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 RPGRQ92834 1020 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 PATL2C9JE40 543 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 SLC27A2O14975 620 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 CHGBP05060 677 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 SNHG28P0DPA3 235 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 CCDC158Q5M9N0 1113 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 TEPSINQ96N21 525 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 PIM2Q9P1W9 311 aa5.87□□□□□ -1.47
R3HDM1-203ENST00000409606 MYH7BA7E2Y1 1941 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 POTECB2RU33 542 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 WDHD1O75717 1129 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 CHRNA5P30532 468 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 ECE1P42892 770 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 ANTXR2P58335 489 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 TOB2Q14106 344 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 PI16Q6UXB8 463 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 EYA3Q99504 573 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 MAF1Q9H063 256 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 SIL1Q9H173 461 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 ATP8A2Q9NTI2 1148 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 CYP21A2P08686 494 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 GYG1P46976 350 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 MAP3K11Q16584 847 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 VPS53Q5VIR6 699 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 PRPF38BQ5VTL8 546 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 RASEFQ8IZ41 740 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 MPNDQ8N594 471 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 MPHOSPH8Q99549 860 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 DEFB129Q9H1M3 183 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 TAF6LQ9Y6J9 622 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 TCHHQ07283 1943 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 ZNF532Q9HCE3 1301 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 IARSP41252 1262 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 FUT2Q10981 343 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 RSBN1LQ6PCB5 846 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 C16orf86Q6ZW13 317 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 FAM83AQ86UY5 434 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 REM2Q8IYK8 340 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 SMARCC2Q8TAQ2 1214 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 INTS4Q96HW7 963 aaKnown RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 CNNM1Q9NRU3 951 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 GINM1Q9NU53 330 aa5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 U3KPZ7 1027 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-203ENST00000409606 IQCA1LA6NCM1 817 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 ECE2O60344 883 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 SPDYE2Q495Y8 402 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 MTMR8Q96EF0 704 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 EDC3Q96F86 508 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 ABHD8Q96I13 439 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 SNAP23O00161 211 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 ENTPD3O75355 529 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 REC8O95072 547 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 CD2BP2O95400 341 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 SPTY2D1Q68D10 685 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 CHADLQ6NUI6 762 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 SH3BP5LQ7L8J4 393 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 DAGLAQ9Y4D2 1042 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 SMARCA1P28370 1054 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 MFAP1P55081 439 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 C12orf60Q5U649 245 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 CREB3L3Q68CJ9 461 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 CTR9Q6PD62 1173 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 OLFM4Q6UX06 510 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 IGDCC4Q8TDY8 1250 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 MKL1Q969V6 931 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 FAM198AQ9UFP1 575 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 ZNRF3Q9ULT6 936 aa5.85□□□□□ -1.47
R3HDM1-203ENST00000409606 PLA2G6O60733 806 aa5.84□□□□□ -1.47
R3HDM1-203ENST00000409606 CAPN15O75808 1086 aa5.84□□□□□ -1.47
R3HDM1-203ENST00000409606 LIFRP42702 1097 aa5.84□□□□□ -1.47
R3HDM1-203ENST00000409606 RABEP1Q15276 862 aa5.84□□□□□ -1.47
R3HDM1-203ENST00000409606 LRRFIP1Q32MZ4 808 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms