RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 EVI5O60447 810 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 FAM160A1Q05DH4 1040 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
SHANK2-203ENST00000409161 PPP4R1Q8TF05 950 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 CCDC152Q4G0S7 254 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHANK2-203ENST00000409161 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
SHANK2-203ENST00000409161 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 HIP1RO75146 1068 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 Q6ZUG5 572 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 MED4Q9NPJ6 270 aa13.56□□□□□ -0.24
SHANK2-203ENST00000409161 SPOPO43791 374 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 RSPH3Q86UC2 560 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 CCDC85AQ96PX6 553 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-203ENST00000409161 LLPHQ9BRT6 129 aaKnown RBP13.55□□□□□ -0.24
SHANK2-203ENST00000409161 SYNRGQ9UMZ2 1314 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 SMTNP53814 917 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 TMTC1Q8IUR5 882 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 SDSP20132 328 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 BRD3Q15059 726 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 AP1ARQ63HQ0 302 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 FLOT1O75955 427 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-203ENST00000409161 RNF40O75150 1001 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 EIF2AQ9BY44 585 aaKnown RBP13.55□□□□□ -0.24
SHANK2-203ENST00000409161 DRC3Q9H069 523 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 HHATQ5VTY9 493 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 ANKRD20A3Q5VUR7 823 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 ANKLE2Q86XL3 938 aa13.55□□□□□ -0.24
SHANK2-203ENST00000409161 LEO1Q8WVC0 666 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 IGSF22Q8N9C0 903 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 MARCKSP29966 332 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 PHBP35232 272 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 PDE1CQ14123 709 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 UAP1Q16222 522 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 BRF1Q92994 677 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 HAUS7Q99871 368 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 TROVE2P10155 538 aaKnown RBP eCLIP13.54□□□□□ -0.243e-6■■□□□ 11.8
SHANK2-203ENST00000409161 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 DHX58Q96C10 678 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 CUL4BQ13620 913 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 PDCD2Q16342 344 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-203ENST00000409161 SLC9C1Q4G0N8 1177 aa13.54□□□□□ -0.24
SHANK2-203ENST00000409161 SMARCC2Q8TAQ2 1214 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 LDHAL6AQ6ZMR3 332 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 CERS3Q8IU89 383 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 ERCC3P19447 782 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 GJC1P36383 396 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-203ENST00000409161 CCDC125Q86Z20 511 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 GSDMBQ8TAX9 411 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 RBM8AQ9Y5S9 174 aaKnown RBP13.53□□□□□ -0.24
SHANK2-203ENST00000409161 GCKP35557 465 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 SLC4A8Q2Y0W8 1093 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 MYO10Q9HD67 2058 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 SV2BQ7L1I2 683 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-203ENST00000409161 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-203ENST00000409161 SDCCAG3Q96C92 435 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 PPANQ9NQ55 473 aaKnown RBP13.53□□□□□ -0.24
SHANK2-203ENST00000409161 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
SHANK2-203ENST00000409161 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.24
SHANK2-203ENST00000409161 CCDC84Q86UT8 332 aaPredicted RBP13.52□□□□□ -0.24
SHANK2-203ENST00000409161 HAND2P61296 217 aa13.52□□□□□ -0.24
SHANK2-203ENST00000409161 UBE3BQ7Z3V4 1068 aa13.52□□□□□ -0.24
SHANK2-203ENST00000409161 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.24
SHANK2-203ENST00000409161 SECISBP2LQ93073 1101 aaKnown RBP13.52□□□□□ -0.24
SHANK2-203ENST00000409161 KLHL14Q9P2G3 628 aa13.52□□□□□ -0.24
SHANK2-203ENST00000409161 HAUS3Q68CZ6 603 aa13.52□□□□□ -0.24
SHANK2-203ENST00000409161 RUFY3Q7L099 469 aa13.52□□□□□ -0.24
SHANK2-203ENST00000409161 KRT3P12035 628 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 RLBP1P12271 317 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 NAIPQ13075 1403 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 MCM7P33993 719 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 PDE1AP54750 535 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 ZMAT2Q96NC0 199 aaKnown RBP13.52□□□□□ -0.25
SHANK2-203ENST00000409161 ST5P78524 1137 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 CCDC89Q8N998 374 aa13.52□□□□□ -0.25
SHANK2-203ENST00000409161 GOLGA8KD6RF30 607 aa13.51□□□□□ -0.25
SHANK2-203ENST00000409161 COG7P83436 770 aa13.51□□□□□ -0.25
SHANK2-203ENST00000409161 MUM1L1Q5H9M0 696 aa13.51□□□□□ -0.25
SHANK2-203ENST00000409161 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
SHANK2-203ENST00000409161 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
SHANK2-203ENST00000409161 WHAMMQ8TF30 809 aa13.51□□□□□ -0.25
SHANK2-203ENST00000409161 RBSNQ9H1K0 784 aa13.51□□□□□ -0.25
SHANK2-203ENST00000409161 EXOC7Q9UPT5 735 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms