RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 USH1CQ9Y6N9 552 aa14.53□□□□□ -0.08
RNF43-201ENST00000407977 NDC80O14777 642 aa14.53□□□□□ -0.08
RNF43-201ENST00000407977 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
RNF43-201ENST00000407977 LEO1Q8WVC0 666 aaPredicted RBP14.53□□□□□ -0.08
RNF43-201ENST00000407977 PSMC4P43686 418 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 IDI1Q13907 227 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 FAM184BQ9ULE4 1060 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 AMOTL2Q9Y2J4 779 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 TMEM110-MUSTN1A8MSY1 372 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 BCL2L12Q9HB09 334 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 ZFYVE9O95405 1425 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 MAPKBP1O60336 1514 aa14.52□□□□□ -0.08
RNF43-201ENST00000407977 C6orf229H3BNL8 230 aa14.52□□□□□ -0.09
RNF43-201ENST00000407977 APBB1IPQ7Z5R6 666 aaPredicted RBP14.52□□□□□ -0.09
RNF43-201ENST00000407977 SYNRGQ9UMZ2 1314 aa14.52□□□□□ -0.09
RNF43-201ENST00000407977 MAGEB6P1A0A0J9YX57 407 aa14.52□□□□□ -0.09
RNF43-201ENST00000407977 DEXIO95424 95 aa14.52□□□□□ -0.09
RNF43-201ENST00000407977 MCM7P33993 719 aa14.52□□□□□ -0.09
RNF43-201ENST00000407977 MAP2K2P36507 400 aa14.52□□□□□ -0.09
RNF43-201ENST00000407977 CCT6AP40227 531 aaKnown RBP14.52□□□□□ -0.09
RNF43-201ENST00000407977 CCDC38Q502W7 563 aa14.52□□□□□ -0.09
RNF43-201ENST00000407977 ACEP12821 1306 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 PLCG2P16885 1265 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 TPD52P55327 224 aaPredicted RBP14.51□□□□□ -0.09
RNF43-201ENST00000407977 WHAMMP3Q1A5X7 153 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 CEP85LQ5SZL2 805 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 FCHSD1Q86WN1 690 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 UBL4BQ8N7F7 174 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 FAM169AQ9Y6X4 670 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 ERCC5P28715 1186 aaPredicted RBP14.51□□□□□ -0.09
RNF43-201ENST00000407977 PHLDB2Q86SQ0 1253 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 SMARCC2Q8TAQ2 1214 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 NUCKS1Q9H1E3 243 aaKnown RBP14.51□□□□□ -0.09
RNF43-201ENST00000407977 ANXA1P04083 346 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 CFAP221Q4G0U5 840 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 UTP14CQ5TAP6 766 aaKnown RBP14.51□□□□□ -0.09
RNF43-201ENST00000407977 SPDYE3A6NKU9 549 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 PAK1Q13153 545 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 SLC9C1Q4G0N8 1177 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 VSIG1Q86XK7 387 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 KIFAP3Q92845 792 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 CTNND2Q9UQB3 1225 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 PRAG1Q86YV5 1406 aa14.51□□□□□ -0.09
RNF43-201ENST00000407977 EPB41P11171 864 aaKnown RBP14.5□□□□□ -0.09
RNF43-201ENST00000407977 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 RASSF2P50749 326 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 TRAF5O00463 557 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 EXOC5O00471 708 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 ADGRL1O94910 1474 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 BRD1O95696 1058 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 RAPGEF1Q13905 1077 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 CCDC84Q86UT8 332 aaPredicted RBP14.5□□□□□ -0.09
RNF43-201ENST00000407977 MCUR1Q96AQ8 359 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 BABAM1Q9NWV8 329 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 SNX14Q9Y5W7 946 aa14.5□□□□□ -0.09
RNF43-201ENST00000407977 GMNNO75496 209 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 SYCE1Q8N0S2 351 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 VPS16Q9H269 839 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 FRMD4BQ9Y2L6 1034 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 VWA3AA6NCI4 1184 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 CASQ2O14958 399 aaPredicted RBP14.49□□□□□ -0.09
RNF43-201ENST00000407977 GJC1P36383 396 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.49□□□□□ -0.09
RNF43-201ENST00000407977 TM6SF1Q9BZW5 370 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 PA2G4Q9UQ80 394 aaKnown RBP14.49□□□□□ -0.09
RNF43-201ENST00000407977 SLC27A2O14975 620 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 SGSM2O43147 1006 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 ZNF202O95125 648 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 CCDC62Q6P9F0 684 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 RNF123Q5XPI4 1314 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 SPOPO43791 374 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 KRT9P35527 623 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 ZNF365Q70YC5 407 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 CSGALNACT2Q8N6G5 542 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 STK24Q9Y6E0 443 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
RNF43-201ENST00000407977 NUTM2BA6NNL0 878 aaPredicted RBP14.49□□□□□ -0.09
RNF43-201ENST00000407977 EFCAB8A8MWE9 144 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 NUTM2EB1AL46 878 aaPredicted RBP14.49□□□□□ -0.09
RNF43-201ENST00000407977 CLGNO14967 610 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 RPUSD2Q8IZ73 545 aaKnown RBP14.49□□□□□ -0.09
RNF43-201ENST00000407977 MED4Q9NPJ6 270 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 NFE2L3Q9Y4A8 694 aa14.49□□□□□ -0.09
RNF43-201ENST00000407977 ATP8B1O43520 1251 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 TNFAIP3P21580 790 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 NPC1L1Q9UHC9 1359 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 MAGEA1P43355 309 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 ASIC2Q16515 512 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 PNMA8AQ86V59 439 aaPredicted RBP14.48□□□□□ -0.09
RNF43-201ENST00000407977 TNNI2P48788 182 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 PDE4DQ08499 809 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 SMC1BQ8NDV3 1235 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 PARP2Q9UGN5 583 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 PPP2R5EQ16537 467 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 PPP1R12CQ9BZL4 782 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 WWC3Q9ULE0 1092 aa14.48□□□□□ -0.09
RNF43-201ENST00000407977 FOXO3O43524 673 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms