RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.37■■□□□ 1.81
RHBDD3-202ENST00000406335 DPF3Q92784 378 aa26.37■■□□□ 1.81
RHBDD3-202ENST00000406335 SUGT1Q9Y2Z0 365 aa26.37■■□□□ 1.81
RHBDD3-202ENST00000406335 FKBP1CQ5VVH2 108 aa26.36■■□□□ 1.81
RHBDD3-202ENST00000406335 KLHDC4Q8TBB5 520 aa26.36■■□□□ 1.81
RHBDD3-202ENST00000406335 RAET1EQ8TD07 263 aa26.36■■□□□ 1.81
RHBDD3-202ENST00000406335 BIN2Q9UBW5 565 aaPredicted RBP26.36■■□□□ 1.81
RHBDD3-202ENST00000406335 PSMC4P43686 418 aa26.35■■□□□ 1.81
RHBDD3-202ENST00000406335 TCP10Q12799 353 aa26.35■■□□□ 1.81
RHBDD3-202ENST00000406335 PUM3Q15397 648 aaKnown RBP26.35■■□□□ 1.81
RHBDD3-202ENST00000406335 HHIPL2Q6UWX4 724 aa26.35■■□□□ 1.81
RHBDD3-202ENST00000406335 H0YGN5 161 aa26.34■■□□□ 1.81
RHBDD3-202ENST00000406335 PDHXO00330 501 aa26.34■■□□□ 1.81
RHBDD3-202ENST00000406335 RABL6Q3YEC7 729 aaPredicted RBP26.34■■□□□ 1.81
RHBDD3-202ENST00000406335 UTYO14607 1347 aa26.34■■□□□ 1.81
RHBDD3-202ENST00000406335 SLC5A1P13866 664 aa26.33■■□□□ 1.81
RHBDD3-202ENST00000406335 INPP5BP32019 993 aa26.33■■□□□ 1.81
RHBDD3-202ENST00000406335 WDR66Q8TBY9 1149 aa26.33■■□□□ 1.81
RHBDD3-202ENST00000406335 HTTP42858 3142 aa26.32■■□□□ 1.8
RHBDD3-202ENST00000406335 ALDH1L2Q3SY69 923 aa26.32■■□□□ 1.8
RHBDD3-202ENST00000406335 C17orf99Q6UX52 265 aa26.32■■□□□ 1.8
RHBDD3-202ENST00000406335 ANKRD23Q86SG2 305 aa26.32■■□□□ 1.8
RHBDD3-202ENST00000406335 ANKRD44Q8N8A2 993 aa26.32■■□□□ 1.8
RHBDD3-202ENST00000406335 FAM151AQ8WW52 585 aa26.32■■□□□ 1.8
RHBDD3-202ENST00000406335 PTPRCP08575 1304 aa26.32■■□□□ 1.8
RHBDD3-202ENST00000406335 VGLL2Q8N8G2 317 aa26.31■■□□□ 1.8
RHBDD3-202ENST00000406335 NKX2-3Q8TAU0 364 aa26.31■■□□□ 1.8
RHBDD3-202ENST00000406335 TRIM47Q96LD4 638 aa26.31■■□□□ 1.8
RHBDD3-202ENST00000406335 SMC4Q9NTJ3 1288 aa26.31■■□□□ 1.8
RHBDD3-202ENST00000406335 SRRDQ9UH36 339 aa26.31■■□□□ 1.8
RHBDD3-202ENST00000406335 OTOFQ9HC10 1997 aa26.31■■□□□ 1.8
RHBDD3-202ENST00000406335 MTFR1Q15390 333 aa26.3■■□□□ 1.8
RHBDD3-202ENST00000406335 MKI67P46013 3256 aaKnown RBP26.3■■□□□ 1.8
RHBDD3-202ENST00000406335 LAMB1P07942 1786 aa26.29■■□□□ 1.8
RHBDD3-202ENST00000406335 GRK4P32298 578 aa26.29■■□□□ 1.8
RHBDD3-202ENST00000406335 LPIN2Q92539 896 aa26.29■■□□□ 1.8
RHBDD3-202ENST00000406335 CENPFP49454 3210 aa26.28■■□□□ 1.8
RHBDD3-202ENST00000406335 OSBPP22059 807 aa26.28■■□□□ 1.8
RHBDD3-202ENST00000406335 UBXN2AP68543 259 aa26.28■■□□□ 1.8
RHBDD3-202ENST00000406335 CHRDL2Q6WN34 429 aa26.28■■□□□ 1.8
RHBDD3-202ENST00000406335 USP40Q9NVE5 1235 aa26.28■■□□□ 1.8
RHBDD3-202ENST00000406335 GNL3LQ9NVN8 582 aaKnown RBP26.28■■□□□ 1.8
RHBDD3-202ENST00000406335 MYPNQ86TC9 1320 aa26.28■■□□□ 1.8
RHBDD3-202ENST00000406335 CDC42EP5Q6NZY7 148 aa26.27■■□□□ 1.8
RHBDD3-202ENST00000406335 PARK7Q99497 189 aaKnown RBP26.27■■□□□ 1.8
RHBDD3-202ENST00000406335 RNF208Q9H0X6 261 aa26.27■■□□□ 1.8
RHBDD3-202ENST00000406335 RBBP6Q7Z6E9 1792 aaKnown RBP26.27■■□□□ 1.8
RHBDD3-202ENST00000406335 RPAP1Q9BWH6 1393 aaPredicted RBP26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 KIF16BQ96L93 1317 aa26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 EYA2O00167 538 aa26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 LDHBP07195 334 aaKnown RBP26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 CT47B1P0C2W7 299 aaPredicted RBP26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 FGFR2P21802 821 aa26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 DIXDC1Q155Q3 683 aa26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 HTATIP2Q9BUP3 242 aa26.26■■□□□ 1.79
RHBDD3-202ENST00000406335 CTGFP29279 349 aa26.25■■□□□ 1.79
RHBDD3-202ENST00000406335 FCGRTP55899 365 aa26.25■■□□□ 1.79
RHBDD3-202ENST00000406335 ZNF112Q9UJU3 913 aa26.25■■□□□ 1.79
RHBDD3-202ENST00000406335 KCNH4Q9UQ05 1017 aa26.25■■□□□ 1.79
RHBDD3-202ENST00000406335 DAGLAQ9Y4D2 1042 aa26.25■■□□□ 1.79
RHBDD3-202ENST00000406335 KIAA0100Q14667 2235 aaKnown RBP26.24■■□□□ 1.79
RHBDD3-202ENST00000406335 CCL5P13501 91 aa26.24■■□□□ 1.79
RHBDD3-202ENST00000406335 HNRNPUQ00839 825 aaKnown RBP eCLIP26.24■■□□□ 1.79
RHBDD3-202ENST00000406335 NFIAQ12857 509 aa26.24■■□□□ 1.79
RHBDD3-202ENST00000406335 USP44Q9H0E7 712 aa26.24■■□□□ 1.79
RHBDD3-202ENST00000406335 PICK1Q9NRD5 415 aa26.24■■□□□ 1.79
RHBDD3-202ENST00000406335 ARAP2Q8WZ64 1704 aa26.24■■□□□ 1.79
RHBDD3-202ENST00000406335 ZSCAN29Q8IWY8 852 aaPredicted RBP26.23■■□□□ 1.79
RHBDD3-202ENST00000406335 SIL1Q9H173 461 aa26.23■■□□□ 1.79
RHBDD3-202ENST00000406335 CXCL11O14625 94 aa26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 CYP2C8P10632 490 aa26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 PRDX5P30044 214 aa26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 GJA8P48165 433 aa26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 RARSP54136 660 aaKnown RBP26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 CEP126Q9P2H0 1117 aa26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 NOB1Q9ULX3 412 aaKnown RBP26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 ZHX2Q9Y6X8 837 aa26.22■■□□□ 1.79
RHBDD3-202ENST00000406335 GJB1P08034 283 aa26.21■■□□□ 1.79
RHBDD3-202ENST00000406335 PRKCZQ05513 592 aa26.21■■□□□ 1.79
RHBDD3-202ENST00000406335 NOL9Q5SY16 702 aaKnown RBP26.21■■□□□ 1.79
RHBDD3-202ENST00000406335 GADL1Q6ZQY3 521 aa26.21■■□□□ 1.79
RHBDD3-202ENST00000406335 FASTKD5Q7L8L6 764 aaKnown RBP26.21■■□□□ 1.79
RHBDD3-202ENST00000406335 SHISA4Q96DD7 197 aa26.21■■□□□ 1.79
RHBDD3-202ENST00000406335 NR2E3Q9Y5X4 410 aa26.21■■□□□ 1.79
RHBDD3-202ENST00000406335 ATP2B3Q16720 1220 aa26.2■■□□□ 1.78
RHBDD3-202ENST00000406335 DENND2AQ9ULE3 1009 aa26.2■■□□□ 1.78
RHBDD3-202ENST00000406335 LRRFIP2Q9Y608 721 aaKnown RBP26.2■■□□□ 1.78
RHBDD3-202ENST00000406335 BRCA2P51587 3418 aa26.2■■□□□ 1.78
RHBDD3-202ENST00000406335 SLAIN1Q8ND83 568 aa26.19■■□□□ 1.78
RHBDD3-202ENST00000406335 RBM27Q9P2N5 1060 aaKnown RBP26.19■■□□□ 1.78
RHBDD3-202ENST00000406335 FAM198AQ9UFP1 575 aa26.19■■□□□ 1.78
RHBDD3-202ENST00000406335 ZFPM1Q8IX07 1006 aa26.18■■□□□ 1.78
RHBDD3-202ENST00000406335 TAOK2Q9UL54 1235 aa26.18■■□□□ 1.78
RHBDD3-202ENST00000406335 RFX5P48382 616 aaPredicted RBP26.17■■□□□ 1.78
RHBDD3-202ENST00000406335 MOGSQ13724 837 aa26.17■■□□□ 1.78
RHBDD3-202ENST00000406335 GPAT2Q6NUI2 795 aa26.17■■□□□ 1.78
RHBDD3-202ENST00000406335 SCYL3Q8IZE3 742 aa26.17■■□□□ 1.78
RHBDD3-202ENST00000406335 SMCR8Q8TEV9 937 aaPredicted RBP26.17■■□□□ 1.78
RHBDD3-202ENST00000406335 U2AF1L4Q8WU68 220 aaKnown RBP26.17■■□□□ 1.78
RHBDD3-202ENST00000406335 ADGRA2Q96PE1 1338 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms