RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 ZSWIM5Q9P217 1185 aa16.59■□□□□ 0.25
PRAME-205ENST00000405655 ANKRD31Q8N7Z5 1873 aa16.59■□□□□ 0.25
PRAME-205ENST00000405655 MAGEB6P1A0A0J9YX57 407 aa16.58■□□□□ 0.25
PRAME-205ENST00000405655 ZNF772Q68DY9 489 aaPredicted RBP16.58■□□□□ 0.25
PRAME-205ENST00000405655 RIOK1Q9BRS2 568 aaKnown RBP16.58■□□□□ 0.25
PRAME-205ENST00000405655 FTOQ9C0B1 505 aaKnown RBP eCLIP16.58■□□□□ 0.25
PRAME-205ENST00000405655 GOLGA8BA8MQT2 603 aa16.58■□□□□ 0.24
PRAME-205ENST00000405655 PRDM1O75626 825 aa16.58■□□□□ 0.24
PRAME-205ENST00000405655 RXRBP28702 533 aa16.58■□□□□ 0.24
PRAME-205ENST00000405655 NAA16Q6N069 864 aaPredicted RBP16.58■□□□□ 0.24
PRAME-205ENST00000405655 NSUN4Q96CB9 384 aaKnown RBP16.58■□□□□ 0.24
PRAME-205ENST00000405655 ANKRD2Q9GZV1 360 aa16.58■□□□□ 0.24
PRAME-205ENST00000405655 ST5P78524 1137 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 DIXDC1Q155Q3 683 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 AIFM3Q96NN9 605 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 UFL1O94874 794 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 CYP2D6P10635 497 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 ADD1P35611 737 aaKnown RBP16.57■□□□□ 0.24
PRAME-205ENST00000405655 CEBPZQ03701 1054 aaKnown RBP16.57■□□□□ 0.24
PRAME-205ENST00000405655 IL27Q8NEV9 243 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 PDGFDQ9GZP0 370 aaPredicted RBP16.57■□□□□ 0.24
PRAME-205ENST00000405655 POLLQ9UGP5 575 aa16.57■□□□□ 0.24
PRAME-205ENST00000405655 SYCE3A1L190 88 aa16.56■□□□□ 0.24
PRAME-205ENST00000405655 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
PRAME-205ENST00000405655 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
PRAME-205ENST00000405655 CDC27P30260 824 aa16.55■□□□□ 0.24
PRAME-205ENST00000405655 CMTR1Q8N1G2 835 aaKnown RBP16.55■□□□□ 0.24
PRAME-205ENST00000405655 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
PRAME-205ENST00000405655 TRDNQ13061 729 aa16.55■□□□□ 0.24
PRAME-205ENST00000405655 TTC6Q86TZ1 520 aa16.55■□□□□ 0.24
PRAME-205ENST00000405655 MICU3Q86XE3 530 aa16.55■□□□□ 0.24
PRAME-205ENST00000405655 FAM184AQ8NB25 1140 aa16.55■□□□□ 0.24
PRAME-205ENST00000405655 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
PRAME-205ENST00000405655 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
PRAME-205ENST00000405655 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
PRAME-205ENST00000405655 PNPLA7Q6ZV29 1317 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
PRAME-205ENST00000405655 ALX1Q15699 326 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 PHKBQ93100 1093 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 CHMP4CQ96CF2 233 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
PRAME-205ENST00000405655 H3BQV1 296 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 MMP10P09238 476 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 PPARAQ07869 468 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 EZH2Q15910 746 aaKnown RBP16.54■□□□□ 0.24
PRAME-205ENST00000405655 IFFO2Q5TF58 517 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 GRPEL1Q9HAV7 217 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 LY9Q9HBG7 655 aa16.54■□□□□ 0.24
PRAME-205ENST00000405655 XDHP47989 1333 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 RESTQ13127 1097 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
PRAME-205ENST00000405655 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 CCDC88AQ3V6T2 1871 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
PRAME-205ENST00000405655 CCDC82Q8N4S0 544 aa16.53■□□□□ 0.24
PRAME-205ENST00000405655 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
PRAME-205ENST00000405655 USP17L12C9JPN9 530 aa16.52■□□□□ 0.24
PRAME-205ENST00000405655 USP17L21D6R901 530 aa16.52■□□□□ 0.24
PRAME-205ENST00000405655 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
PRAME-205ENST00000405655 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.24
PRAME-205ENST00000405655 PLSCR1O15162 318 aa16.52■□□□□ 0.24
PRAME-205ENST00000405655 PTMSP20962 102 aa16.52■□□□□ 0.24
PRAME-205ENST00000405655 EVCP57679 992 aa16.52■□□□□ 0.24
PRAME-205ENST00000405655 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
PRAME-205ENST00000405655 ILDR1Q86SU0 546 aaPredicted RBP16.52■□□□□ 0.24
PRAME-205ENST00000405655 NMT2O60551 498 aa16.51■□□□□ 0.23
PRAME-205ENST00000405655 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
PRAME-205ENST00000405655 APOA5Q6Q788 366 aa16.51■□□□□ 0.23
PRAME-205ENST00000405655 FAM217BQ9NTX9 383 aaPredicted RBP16.51■□□□□ 0.23
PRAME-205ENST00000405655 USP17L8P0C7I0 530 aa16.51■□□□□ 0.23
PRAME-205ENST00000405655 TDRD7Q8NHU6 1098 aaKnown RBP16.51■□□□□ 0.23
PRAME-205ENST00000405655 TBC1D16Q8TBP0 767 aa16.51■□□□□ 0.23
PRAME-205ENST00000405655 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
PRAME-205ENST00000405655 RBSNQ9H1K0 784 aa16.51■□□□□ 0.23
PRAME-205ENST00000405655 PDCP20941 246 aa16.5■□□□□ 0.23
PRAME-205ENST00000405655 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
PRAME-205ENST00000405655 CD209Q9NNX6 404 aa16.5■□□□□ 0.23
PRAME-205ENST00000405655 LEMD3Q9Y2U8 911 aa16.5■□□□□ 0.23
PRAME-205ENST00000405655 ECM29Q5VYK3 1845 aa16.5■□□□□ 0.23
PRAME-205ENST00000405655 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
PRAME-205ENST00000405655 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
PRAME-205ENST00000405655 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
PRAME-205ENST00000405655 DZIP1Q86YF9 867 aaKnown RBP16.5■□□□□ 0.23
PRAME-205ENST00000405655 FBXL16Q8N461 479 aa16.5■□□□□ 0.23
PRAME-205ENST00000405655 ORC3Q9UBD5 711 aaPredicted RBP16.5■□□□□ 0.23
PRAME-205ENST00000405655 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
PRAME-205ENST00000405655 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
PRAME-205ENST00000405655 DOK7Q18PE1 504 aa16.49■□□□□ 0.23
PRAME-205ENST00000405655 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
PRAME-205ENST00000405655 STAG1Q8WVM7 1258 aa16.49■□□□□ 0.23
PRAME-205ENST00000405655 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
PRAME-205ENST00000405655 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
PRAME-205ENST00000405655 DCP1AQ9NPI6 582 aaPredicted RBP16.49■□□□□ 0.23
PRAME-205ENST00000405655 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms