RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 PPP4CP60510 307 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 DYNLL1P63167 89 aaKnown RBP18.9■□□□□ 0.62
CDPF1-204ENST00000404744 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 TBC1D10BQ4KMP7 808 aaPredicted RBP18.9■□□□□ 0.62
CDPF1-204ENST00000404744 SAMD7Q7Z3H4 446 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 MTMR14Q8NCE2 650 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 ADARB2Q9NS39 739 aaKnown RBP18.9■□□□□ 0.62
CDPF1-204ENST00000404744 M0R2C6 588 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 GPAA1O43292 621 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 ESYT1Q9BSJ8 1104 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 ARMT1Q9H993 441 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 USP40Q9NVE5 1235 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 TMOD2Q9NZR1 351 aa18.9■□□□□ 0.62
CDPF1-204ENST00000404744 MYH2Q9UKX2 1941 aa18.89■□□□□ 0.62
CDPF1-204ENST00000404744 SPDYE2BA6NHP3 402 aa18.89■□□□□ 0.61
CDPF1-204ENST00000404744 SPDYE6P0CI01 402 aa18.89■□□□□ 0.61
CDPF1-204ENST00000404744 GNAT2P19087 354 aa18.89■□□□□ 0.61
CDPF1-204ENST00000404744 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.61
CDPF1-204ENST00000404744 KIAA1211Q6ZU35 1233 aa18.89■□□□□ 0.61
CDPF1-204ENST00000404744 LCORLQ8N3X6 602 aa18.89■□□□□ 0.61
CDPF1-204ENST00000404744 PRMT6Q96LA8 375 aaPredicted RBP18.89■□□□□ 0.61
CDPF1-204ENST00000404744 RIOK1Q9BRS2 568 aaKnown RBP18.89■□□□□ 0.61
CDPF1-204ENST00000404744 CRNKL1Q9BZJ0 848 aaKnown RBP18.89■□□□□ 0.61
CDPF1-204ENST00000404744 CCDC171Q6TFL3 1326 aa18.88■□□□□ 0.61
CDPF1-204ENST00000404744 CCDC129Q6ZRS4 1044 aa18.88■□□□□ 0.61
CDPF1-204ENST00000404744 TEX11Q8IYF3 940 aa18.88■□□□□ 0.61
CDPF1-204ENST00000404744 TDRD3Q9H7E2 651 aaKnown RBP18.88■□□□□ 0.61
CDPF1-204ENST00000404744 PCDHAC2Q9Y5I4 1007 aa18.88■□□□□ 0.61
CDPF1-204ENST00000404744 WNT10BO00744 389 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 SGSM2O43147 1006 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 APPP05067 770 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 EPHX2P34913 555 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 USP5P45974 858 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 CDC42EP5Q6NZY7 148 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 SH3RF3Q8TEJ3 882 aaPredicted RBP18.87■□□□□ 0.61
CDPF1-204ENST00000404744 ZNF526Q8TF50 670 aaPredicted RBP18.87■□□□□ 0.61
CDPF1-204ENST00000404744 DDRGK1Q96HY6 314 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 STRBPQ96SI9 672 aaKnown RBP18.87■□□□□ 0.61
CDPF1-204ENST00000404744 SLC4A4Q9Y6R1 1079 aa18.87■□□□□ 0.61
CDPF1-204ENST00000404744 VEGFAP15692 232 aaPredicted RBP18.86■□□□□ 0.61
CDPF1-204ENST00000404744 NBPF9Q3BBW0 867 aa18.86■□□□□ 0.61
CDPF1-204ENST00000404744 USP50Q70EL3 339 aaPredicted RBP18.86■□□□□ 0.61
CDPF1-204ENST00000404744 ZNF589Q86UQ0 364 aaPredicted RBP18.86■□□□□ 0.61
CDPF1-204ENST00000404744 RRAGCQ9HB90 399 aa18.86■□□□□ 0.61
CDPF1-204ENST00000404744 RHBDL3P58872 404 aa18.85■□□□□ 0.61
CDPF1-204ENST00000404744 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
CDPF1-204ENST00000404744 ZBED3Q96IU2 234 aaPredicted RBP18.85■□□□□ 0.61
CDPF1-204ENST00000404744 NACAP1Q9BZK3 213 aa18.85■□□□□ 0.61
CDPF1-204ENST00000404744 VEZTQ9HBM0 779 aa18.85■□□□□ 0.61
CDPF1-204ENST00000404744 ZNF70Q9UC06 446 aaPredicted RBP18.85■□□□□ 0.61
CDPF1-204ENST00000404744 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 REC8O95072 547 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 EGFRP00533 1210 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 C8orf34Q49A92 452 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 PNMA8AQ86V59 439 aaPredicted RBP18.84■□□□□ 0.61
CDPF1-204ENST00000404744 TGFBRAP1Q8WUH2 860 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 TAF1DQ9H5J8 278 aaPredicted RBP18.84■□□□□ 0.61
CDPF1-204ENST00000404744 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 PATL2C9JE40 543 aaKnown RBP18.84■□□□□ 0.61
CDPF1-204ENST00000404744 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 EAPPQ56P03 285 aaPredicted RBP18.84■□□□□ 0.61
CDPF1-204ENST00000404744 ATP8A2Q9NTI2 1148 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 WDR90Q96KV7 1748 aa18.84■□□□□ 0.61
CDPF1-204ENST00000404744 ADAMTSL1Q8N6G6 1762 aa18.83■□□□□ 0.61
CDPF1-204ENST00000404744 RPAP1Q9BWH6 1393 aaPredicted RBP18.83■□□□□ 0.61
CDPF1-204ENST00000404744 PRKAB2O43741 272 aa18.83■□□□□ 0.6
CDPF1-204ENST00000404744 PICALMQ13492 652 aa18.83■□□□□ 0.6
CDPF1-204ENST00000404744 SDR42E1Q8WUS8 393 aa18.83■□□□□ 0.6
CDPF1-204ENST00000404744 IL25Q9H293 177 aa18.83■□□□□ 0.6
CDPF1-204ENST00000404744 SCN4AP35499 1836 aa18.83■□□□□ 0.6
CDPF1-204ENST00000404744 POTECB2RU33 542 aa18.82■□□□□ 0.6
CDPF1-204ENST00000404744 HSPD1P10809 573 aaKnown RBP18.82■□□□□ 0.6
CDPF1-204ENST00000404744 TNNI2P48788 182 aa18.82■□□□□ 0.6
CDPF1-204ENST00000404744 CACNB3P54284 484 aa18.82■□□□□ 0.6
CDPF1-204ENST00000404744 MAPKAPK5Q8IW41 473 aa18.82■□□□□ 0.6
CDPF1-204ENST00000404744 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
CDPF1-204ENST00000404744 TCP10L2B9ZVM9 353 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 TDO2P48775 406 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 HIRAP54198 1017 aaPredicted RBP18.81■□□□□ 0.6
CDPF1-204ENST00000404744 TNFAIP1Q13829 316 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 VPS53Q5VIR6 699 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 ANGEL2Q5VTE6 544 aaKnown RBP18.81■□□□□ 0.6
CDPF1-204ENST00000404744 AMOTL1Q8IY63 956 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 DCPSQ96C86 337 aaKnown RBP18.81■□□□□ 0.6
CDPF1-204ENST00000404744 DSCC1Q9BVC3 393 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 IDI2Q9BXS1 227 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 NAPBQ9H115 298 aa18.81■□□□□ 0.6
CDPF1-204ENST00000404744 WDHD1O75717 1129 aaPredicted RBP18.8■□□□□ 0.6
CDPF1-204ENST00000404744 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
CDPF1-204ENST00000404744 APOBEC3FQ8IUX4 373 aaKnown RBP18.8■□□□□ 0.6
CDPF1-204ENST00000404744 IFNL3Q8IZI9 196 aa18.8■□□□□ 0.6
CDPF1-204ENST00000404744 ZC3H15Q8WU90 426 aaKnown RBP18.8■□□□□ 0.6
CDPF1-204ENST00000404744 GPBP1L1Q9HC44 474 aaPredicted RBP18.8■□□□□ 0.6
CDPF1-204ENST00000404744 GGA3Q9NZ52 723 aa18.8■□□□□ 0.6
CDPF1-204ENST00000404744 GSG1L2A8MUP6 293 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 TCP10Q12799 353 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 FKBP1CQ5VVH2 108 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
CDPF1-204ENST00000404744 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
CDPF1-204ENST00000404744 CTNNA3Q9UI47 895 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms