RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CD209Q9NNX6 404 aa25.01■■□□□ 1.59
TPM1-208ENST00000404484 MAST2Q6P0Q8 1798 aa25■■□□□ 1.59
TPM1-208ENST00000404484 CYP7A1P22680 504 aa25■■□□□ 1.59
TPM1-208ENST00000404484 GMPSP49915 693 aaPredicted RBP25■■□□□ 1.59
TPM1-208ENST00000404484 NAA16Q6N069 864 aaPredicted RBP25■■□□□ 1.59
TPM1-208ENST00000404484 STRBPQ96SI9 672 aaKnown RBP24.99■■□□□ 1.59
TPM1-208ENST00000404484 COA1Q9GZY4 146 aa24.99■■□□□ 1.59
TPM1-208ENST00000404484 ZBTB12Q9Y330 459 aaPredicted RBP24.99■■□□□ 1.59
TPM1-208ENST00000404484 SCN4AP35499 1836 aa24.99■■□□□ 1.59
TPM1-208ENST00000404484 MBD4O95243 580 aa24.98■■□□□ 1.59
TPM1-208ENST00000404484 HSP90AA1P07900 732 aaKnown RBP24.98■■□□□ 1.59
TPM1-208ENST00000404484 LMOD1P29536 600 aaPredicted RBP24.98■■□□□ 1.59
TPM1-208ENST00000404484 PODNQ7Z5L7 613 aa24.98■■□□□ 1.59
TPM1-208ENST00000404484 GPRC5DQ9NZD1 345 aa24.98■■□□□ 1.59
TPM1-208ENST00000404484 ZMYM6O95789 1325 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 CYP21A2P08686 494 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 FSTL1Q12841 308 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 IMMTQ16891 758 aaKnown RBP24.97■■□□□ 1.59
TPM1-208ENST00000404484 BLOC1S2Q6QNY1 142 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 RUFY3Q7L099 469 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 SMC1BQ8NDV3 1235 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 HMGB1P09429 215 aaKnown RBP24.97■■□□□ 1.59
TPM1-208ENST00000404484 ALX1Q15699 326 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 EAPPQ56P03 285 aaPredicted RBP24.97■■□□□ 1.59
TPM1-208ENST00000404484 TBC1D22AQ8WUA7 517 aa24.97■■□□□ 1.59
TPM1-208ENST00000404484 SCN9AQ15858 1988 aa24.96■■□□□ 1.59
TPM1-208ENST00000404484 LDHBP07195 334 aaKnown RBP24.96■■□□□ 1.59
TPM1-208ENST00000404484 VIL1P09327 827 aaKnown RBP24.96■■□□□ 1.59
TPM1-208ENST00000404484 ADCK5Q3MIX3 580 aa24.96■■□□□ 1.59
TPM1-208ENST00000404484 DZIP1Q86YF9 867 aaKnown RBP24.96■■□□□ 1.59
TPM1-208ENST00000404484 NSUN4Q96CB9 384 aaKnown RBP24.96■■□□□ 1.59
TPM1-208ENST00000404484 TTC14Q96N46 770 aa24.96■■□□□ 1.59
TPM1-208ENST00000404484 MAGEB6P1A0A0J9YX57 407 aa24.95■■□□□ 1.58
TPM1-208ENST00000404484 PATL2C9JE40 543 aaKnown RBP24.95■■□□□ 1.58
TPM1-208ENST00000404484 FOXP2O15409 715 aa24.95■■□□□ 1.58
TPM1-208ENST00000404484 FGAP02671 866 aa24.95■■□□□ 1.58
TPM1-208ENST00000404484 APPP05067 770 aa24.95■■□□□ 1.58
TPM1-208ENST00000404484 GSTO1P78417 241 aa24.95■■□□□ 1.58
TPM1-208ENST00000404484 PNMA8AQ86V59 439 aaPredicted RBP24.95■■□□□ 1.58
TPM1-208ENST00000404484 NACAP1Q9BZK3 213 aa24.95■■□□□ 1.58
TPM1-208ENST00000404484 PDRG1Q9NUG6 133 aa24.95■■□□□ 1.58
TPM1-208ENST00000404484 SHTN1A0MZ66 631 aa24.94■■□□□ 1.58
TPM1-208ENST00000404484 MECOMQ03112 1051 aa24.94■■□□□ 1.58
TPM1-208ENST00000404484 NEK1Q96PY6 1258 aa24.94■■□□□ 1.58
TPM1-208ENST00000404484 ARMT1Q9H993 441 aa24.94■■□□□ 1.58
TPM1-208ENST00000404484 CNOT7Q9UIV1 285 aaKnown RBP24.94■■□□□ 1.58
TPM1-208ENST00000404484 FAM205AQ6ZU69 1335 aa24.94■■□□□ 1.58
TPM1-208ENST00000404484 ANKRD1Q15327 319 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 LDHDQ86WU2 507 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 DPF2Q92785 391 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 CEP350Q5VT06 3117 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 HSPA6P17066 643 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 RPS6KB1P23443 525 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 PRDX5P30044 214 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 CHADLQ6NUI6 762 aa24.93■■□□□ 1.58
TPM1-208ENST00000404484 ALDH8A1Q9H2A2 487 aaPredicted RBP24.93■■□□□ 1.58
TPM1-208ENST00000404484 USP17L3A6NCW0 530 aa24.92■■□□□ 1.58
TPM1-208ENST00000404484 USP17L4A6NCW7 530 aa24.92■■□□□ 1.58
TPM1-208ENST00000404484 ZNF213O14771 459 aa24.92■■□□□ 1.58
TPM1-208ENST00000404484 USP17L1Q7RTZ2 530 aa24.92■■□□□ 1.58
TPM1-208ENST00000404484 LCORLQ8N3X6 602 aa24.92■■□□□ 1.58
TPM1-208ENST00000404484 MIGA1Q8NAN2 632 aa24.92■■□□□ 1.58
TPM1-208ENST00000404484 CLEC11AQ9Y240 323 aa24.92■■□□□ 1.58
TPM1-208ENST00000404484 LDHCP07864 332 aa24.91■■□□□ 1.58
TPM1-208ENST00000404484 RPS12P25398 132 aaKnown RBP24.91■■□□□ 1.58
TPM1-208ENST00000404484 USP50Q70EL3 339 aaPredicted RBP24.91■■□□□ 1.58
TPM1-208ENST00000404484 MICALL2Q8IY33 904 aa24.91■■□□□ 1.58
TPM1-208ENST00000404484 TMX3Q96JJ7 454 aa24.91■■□□□ 1.58
TPM1-208ENST00000404484 NAPBQ9H115 298 aa24.91■■□□□ 1.58
TPM1-208ENST00000404484 SLKQ9H2G2 1235 aaPredicted RBP24.91■■□□□ 1.58
TPM1-208ENST00000404484 ADARB2Q9NS39 739 aaKnown RBP24.91■■□□□ 1.58
TPM1-208ENST00000404484 SLC4A4Q9Y6R1 1079 aa24.91■■□□□ 1.58
TPM1-208ENST00000404484 AK2P54819 239 aa24.9■■□□□ 1.58
TPM1-208ENST00000404484 TTLL5Q6EMB2 1281 aa24.9■■□□□ 1.58
TPM1-208ENST00000404484 RSBN1LQ6PCB5 846 aaPredicted RBP24.9■■□□□ 1.58
TPM1-208ENST00000404484 CERS3Q8IU89 383 aa24.9■■□□□ 1.58
TPM1-208ENST00000404484 RIOK1Q9BRS2 568 aaKnown RBP24.9■■□□□ 1.58
TPM1-208ENST00000404484 LIMCH1Q9UPQ0 1083 aa24.9■■□□□ 1.58
TPM1-208ENST00000404484 JAG2Q9Y219 1238 aa24.9■■□□□ 1.58
TPM1-208ENST00000404484 SUGT1Q9Y2Z0 365 aa24.9■■□□□ 1.58
TPM1-208ENST00000404484 TAF6LQ9Y6J9 622 aa24.9■■□□□ 1.58
TPM1-208ENST00000404484 E7EWF7 191 aa24.89■■□□□ 1.58
TPM1-208ENST00000404484 H7C1D1 291 aa24.89■■□□□ 1.58
TPM1-208ENST00000404484 ADGRA1Q86SQ6 560 aa24.89■■□□□ 1.58
TPM1-208ENST00000404484 SLF2Q8IX21 1173 aa24.89■■□□□ 1.58
TPM1-208ENST00000404484 IFNL3Q8IZI9 196 aa24.89■■□□□ 1.58
TPM1-208ENST00000404484 SPRYD3Q8NCJ5 442 aa24.89■■□□□ 1.58
TPM1-208ENST00000404484 LAMA4Q16363 1823 aa24.89■■□□□ 1.58
TPM1-208ENST00000404484 ZNF384Q8TF68 577 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 ZSCAN31Q96LW9 406 aaPredicted RBP24.88■■□□□ 1.57
TPM1-208ENST00000404484 GMLQ99445 158 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 NOL10Q9BSC4 688 aaKnown RBP24.88■■□□□ 1.57
TPM1-208ENST00000404484 MXD3Q9BW11 206 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 GSG1L2A8MUP6 293 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 CPA1P15085 419 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 TDO2P48775 406 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 HIRAP54198 1017 aaPredicted RBP24.88■■□□□ 1.57
TPM1-208ENST00000404484 MFSD14BQ5SR56 506 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 DACT2Q5SW24 774 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 STRIP1Q5VSL9 837 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms