RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 SMC3Q9UQE7 1217 aa27.57■■■□□ 2
TRIOBP-203ENST00000403663 HIP1O00291 1037 aa27.56■■■□□ 2
TRIOBP-203ENST00000403663 KCNA3P22001 575 aa27.56■■■□□ 2
TRIOBP-203ENST00000403663 LARP6Q9BRS8 491 aaKnown RBP27.56■■■□□ 2
TRIOBP-203ENST00000403663 RFX7Q2KHR2 1363 aa27.56■■■□□ 2
TRIOBP-203ENST00000403663 DPEP1P16444 411 aa27.56■■■□□ 2
TRIOBP-203ENST00000403663 JAG2Q9Y219 1238 aa27.56■■■□□ 2
TRIOBP-203ENST00000403663 ATP2B4P23634 1241 aa27.55■■■□□ 2
TRIOBP-203ENST00000403663 DNM1Q05193 864 aaKnown RBP27.55■■■□□ 2
TRIOBP-203ENST00000403663 NCBP1Q09161 790 aaKnown RBP27.55■■■□□ 2
TRIOBP-203ENST00000403663 MED23Q9ULK4 1368 aa27.55■■■□□ 2
TRIOBP-203ENST00000403663 C6orf229H3BNL8 230 aa27.55■■■□□ 2
TRIOBP-203ENST00000403663 IDH1O75874 414 aaKnown RBP27.55■■■□□ 2
TRIOBP-203ENST00000403663 CCDC192P0DO97 292 aa27.55■■■□□ 2
TRIOBP-203ENST00000403663 PTH1RQ03431 593 aa27.55■■■□□ 2
TRIOBP-203ENST00000403663 RUFY2Q8WXA3 655 aa27.55■■■□□ 2
TRIOBP-203ENST00000403663 LSG1Q9H089 658 aaKnown RBP27.55■■■□□ 2
TRIOBP-203ENST00000403663 WWC3Q9ULE0 1092 aa27.55■■■□□ 2
TRIOBP-203ENST00000403663 POLD1P28340 1107 aa27.54■■■□□ 2
TRIOBP-203ENST00000403663 RNF113AO15541 343 aaKnown RBP27.53■■■□□ 2
TRIOBP-203ENST00000403663 PTGS1P23219 599 aa27.53■■■□□ 2
TRIOBP-203ENST00000403663 RASEFQ8IZ41 740 aa27.53■■■□□ 2
TRIOBP-203ENST00000403663 GNL3LQ9NVN8 582 aaKnown RBP27.53■■■□□ 2
TRIOBP-203ENST00000403663 CHD4Q14839 1912 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 PTGER2P43116 358 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 CNKSR1Q969H4 720 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 OGFRQ9NZT2 677 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 MTMR6Q9Y217 621 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 ZMYM1Q5SVZ6 1142 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 C7orf43Q8WVR3 580 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 UTRNP46939 3433 aa27.52■■■□□ 2
TRIOBP-203ENST00000403663 IGSF3O75054 1194 aa27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 TTF1Q15361 905 aaPredicted RBP27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 SYCP1Q15431 976 aa27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 C15orf52Q6ZUT6 534 aaKnown RBP27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 FAM200AQ8TCP9 573 aa27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 OSBP2Q969R2 916 aa27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 PPP1R1BQ9UD71 204 aaPredicted RBP27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 M0R2C6 588 aa27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 RIMBP2O15034 1052 aa27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 SLC9C2Q5TAH2 1124 aa27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 DPP8Q6V1X1 898 aaPredicted RBP27.51■■□□□ 1.99
TRIOBP-203ENST00000403663 LARGE1O95461 756 aa27.5■■□□□ 1.99
TRIOBP-203ENST00000403663 MAST3O60307 1309 aa27.5■■□□□ 1.99
TRIOBP-203ENST00000403663 DENND2AQ9ULE3 1009 aa27.5■■□□□ 1.99
TRIOBP-203ENST00000403663 GJB2P29033 226 aa27.49■■□□□ 1.99
TRIOBP-203ENST00000403663 MCMDC2Q4G0Z9 681 aa27.49■■□□□ 1.99
TRIOBP-203ENST00000403663 ABCF2Q9UG63 623 aa27.49■■□□□ 1.99
TRIOBP-203ENST00000403663 C21orf2O43822 256 aa27.49■■□□□ 1.99
TRIOBP-203ENST00000403663 ADD2P35612 726 aa27.49■■□□□ 1.99
TRIOBP-203ENST00000403663 PUS7LQ9H0K6 701 aaKnown RBP27.49■■□□□ 1.99
TRIOBP-203ENST00000403663 CTNNA3Q9UI47 895 aa27.49■■□□□ 1.99
TRIOBP-203ENST00000403663 SNED1Q8TER0 1413 aa27.48■■□□□ 1.99
TRIOBP-203ENST00000403663 PDE6AP16499 860 aa27.48■■□□□ 1.99
TRIOBP-203ENST00000403663 WASHC4Q2M389 1173 aa27.48■■□□□ 1.99
TRIOBP-203ENST00000403663 TDRD7Q8NHU6 1098 aaKnown RBP27.48■■□□□ 1.99
TRIOBP-203ENST00000403663 CCDC171Q6TFL3 1326 aa27.48■■□□□ 1.99
TRIOBP-203ENST00000403663 ZNF804AQ7Z570 1209 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 CD209Q9NNX6 404 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 ZNF532Q9HCE3 1301 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 TCRBV5S4A2TA0A5A2 114 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 SMTNL1A8MU46 457 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 VPS53Q5VIR6 699 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 TTLL6Q8N841 843 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 MRVI1Q9Y6F6 885 aa27.47■■□□□ 1.99
TRIOBP-203ENST00000403663 BRCA1P38398 1863 aaKnown RBP27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 CPA1P15085 419 aa27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 CCDC186Q7Z3E2 898 aa27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 CCDC83Q8IWF9 413 aa27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 MAGEB6Q8N7X4 407 aa27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 HELLSQ9NRZ9 838 aa27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 SEMA3EO15041 775 aa27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 LRP2BPQ9P2M1 347 aa27.46■■□□□ 1.99
TRIOBP-203ENST00000403663 LRMPQ12912 555 aa27.45■■□□□ 1.99
TRIOBP-203ENST00000403663 LUZP1Q86V48 1076 aa27.45■■□□□ 1.99
TRIOBP-203ENST00000403663 C16orf45Q96MC5 204 aaPredicted RBP27.45■■□□□ 1.99
TRIOBP-203ENST00000403663 DTNBO60941 627 aa27.45■■□□□ 1.98
TRIOBP-203ENST00000403663 ZFYP08048 801 aaPredicted RBP27.45■■□□□ 1.98
TRIOBP-203ENST00000403663 ZNF384Q8TF68 577 aa27.45■■□□□ 1.98
TRIOBP-203ENST00000403663 APPBP2Q92624 585 aa27.45■■□□□ 1.98
TRIOBP-203ENST00000403663 TMX4Q9H1E5 349 aaPredicted RBP27.45■■□□□ 1.98
TRIOBP-203ENST00000403663 CASTP20810 708 aaKnown RBP27.44■■□□□ 1.98
TRIOBP-203ENST00000403663 TYRO3Q06418 890 aa27.44■■□□□ 1.98
TRIOBP-203ENST00000403663 MAP3K11Q16584 847 aa27.44■■□□□ 1.98
TRIOBP-203ENST00000403663 MAP3K12Q12852 859 aa27.44■■□□□ 1.98
TRIOBP-203ENST00000403663 DOK7Q18PE1 504 aa27.43■■□□□ 1.98
TRIOBP-203ENST00000403663 TICAM2Q86XR7 235 aa27.43■■□□□ 1.98
TRIOBP-203ENST00000403663 IL1R1P14778 569 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 PRDX5P30044 214 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 GRIK5Q16478 980 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 ADGRA1Q86SQ6 560 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 MAP4K1Q92918 833 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 NUP62CLQ9H1M0 184 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 TGFB2P61812 414 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 UBE3CQ15386 1083 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 TTC6Q86TZ1 520 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 ZC3H12CQ9C0D7 883 aaKnown RBP27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 RAI14Q9P0K7 980 aa27.42■■□□□ 1.98
TRIOBP-203ENST00000403663 DDX41Q9UJV9 622 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms