RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LIG1P18858 919 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 MCM4P33991 863 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 PIP4K2BP78356 416 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 SETDB1Q15047 1291 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 POU4F3Q15319 338 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 FAM117BQ6P1L5 589 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 ZNF775Q96BV0 537 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 WDR89Q96FK6 387 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 LNPKQ9C0E8 428 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 NRSN2Q9GZP1 204 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 BRMS1Q9HCU9 246 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 CYP8B1Q9UNU6 501 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 SAMM50Q9Y512 469 aa6.02□□□□□ -1.45
HMGB1P17-201ENST00000403495 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 TM4SF5O14894 197 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 SSBP05455 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 ETFBP38117 255 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 ARL4DP49703 201 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 AP3B2Q13367 1082 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 PDE3AQ14432 1141 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 LRRC14Q15048 493 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 FOXD4L6Q3SYB3 417 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 FOXD4L3Q6VB84 417 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 DPH6Q7L8W6 267 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 UBASH3BQ8TF42 649 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 GATAD2BQ8WXI9 593 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 ANAPC16Q96DE5 110 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 ACSBG1Q96GR2 724 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 CORO1BQ9BR76 489 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 EMILIN2Q9BXX0 1053 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 PCDHA4Q9UN74 947 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 CSADQ9Y600 493 aa6.01□□□□□ -1.45
HMGB1P17-201ENST00000403495 ZNF862O60290 1169 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 CILPO75339 1184 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 STK10O94804 968 aaKnown RBP6□□□□□ -1.45
HMGB1P17-201ENST00000403495 DGKGP49619 791 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 SNRPNP63162 240 aaKnown RBP6□□□□□ -1.45
HMGB1P17-201ENST00000403495 CLCQ05315 142 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 INPP5AQ14642 412 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 TRAPPC3LQ5T215 181 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
HMGB1P17-201ENST00000403495 FBXW10Q5XX13 1052 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 ZNF385CQ66K41 422 aaPredicted RBP6□□□□□ -1.45
HMGB1P17-201ENST00000403495 GK5Q6ZS86 529 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 NEDD1Q8NHV4 660 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 SOX17Q9H6I2 414 aaPredicted RBP6□□□□□ -1.45
HMGB1P17-201ENST00000403495 ZNF408Q9H9D4 720 aa6□□□□□ -1.45
HMGB1P17-201ENST00000403495 POLR3KQ9Y2Y1 108 aaPredicted RBP6□□□□□ -1.45
HMGB1P17-201ENST00000403495 WISP1O95388 367 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 BPNT1O95861 308 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 SOX9P48436 509 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 WIPI1Q5MNZ9 446 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 LRFN4Q6PJG9 635 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 REC114Q7Z4M0 266 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 SLITRK4Q8IW52 837 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 CACTIN-AS1Q8N1I8 211 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 SVOPQ8N4V2 548 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 DDX54Q8TDD1 881 aaKnown RBP5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 CPLX3Q8WVH0 158 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 TRIM11Q96F44 468 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 PLPPR2Q96GM1 343 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 SEC16BQ96JE7 1060 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 OSGEPQ9NPF4 335 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 CORINQ9Y5Q5 1042 aa5.99□□□□□ -1.45
HMGB1P17-201ENST00000403495 LOC100289279A0A1B0GTE1 492 aa5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 DCDC2CA8MYV0 355 aa5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 TRIM37O94972 964 aa5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 CYP11A1P05108 521 aa5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 MPP2Q14168 576 aa5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 SUZ12Q15022 739 aaKnown RBP5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 CWF19L2Q2TBE0 894 aaKnown RBP5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 FAM169BQ8N8A8 192 aa5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 HNRNPLLQ8WVV9 542 aaKnown RBP5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 SRRTQ9BXP5 876 aaKnown RBP5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 ANTXR1Q9H6X2 564 aa5.98□□□□□ -1.45
HMGB1P17-201ENST00000403495 A0A0A0MRY4 1105 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 DLL1O00548 723 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 CD68P34810 354 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 CCDC144BQ3MJ40 725 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 ILDR2Q71H61 639 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 CCDC84Q86UT8 332 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 C12orf40Q86WS4 652 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 WNT8BQ93098 351 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 FERD3LQ96RJ6 166 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 LRRC3Q9BY71 257 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 PIF1Q9H611 641 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 PRDM6Q9NQX0 595 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 PCDHB14Q9Y5E9 798 aa5.97□□□□□ -1.45
HMGB1P17-201ENST00000403495 SHROOM4Q9ULL8 1493 aa5.96□□□□□ -1.45
HMGB1P17-201ENST00000403495 PRAMEF27A3QJZ7 478 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 RPL6Q02878 288 aaKnown RBP5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 RBL2Q08999 1139 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 RUFY4Q6ZNE9 571 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 ANKS3Q6ZW76 656 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 KLHL23Q8NBE8 558 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 SHDQ96IW2 340 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 WDR18Q9BV38 432 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 CACNA2D2Q9NY47 1150 aa5.96□□□□□ -1.46
HMGB1P17-201ENST00000403495 SMAD7O15105 426 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms