RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 METAP2P50579 478 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00649-202ENST00000400353 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.53□□□□□ -0.4
LINC00649-202ENST00000400353 SGMS1Q86VZ5 419 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 FBXO18Q8NFZ0 1043 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
LINC00649-202ENST00000400353 USP25Q9UHP3 1055 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 NID2Q14112 1375 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 KCNQ2O43526 872 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 YEATS4O95619 227 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 ADCY5O95622 1261 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 ZNF772Q68DY9 489 aaPredicted RBP12.53□□□□□ -0.4
LINC00649-202ENST00000400353 CYB5R4Q7L1T6 521 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
LINC00649-202ENST00000400353 MRVI1Q9Y6F6 885 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 A0A1W2PQ27 194 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 A0A1W2PQ64 194 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 A0A1W2PQD8 194 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 SEMA3EO15041 775 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 BCAMP50895 628 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 FOSBP53539 338 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 ERFEQ4G0M1 354 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 AKNAD1Q5T1N1 836 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 TMED8Q6PL24 325 aaPredicted RBP12.52□□□□□ -0.4
LINC00649-202ENST00000400353 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.4
LINC00649-202ENST00000400353 KCNG4Q8TDN1 519 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.4
LINC00649-202ENST00000400353 MYO5AQ9Y4I1 1855 aaKnown RBP12.52□□□□□ -0.41
LINC00649-202ENST00000400353 A0A1B0GUL6 1792 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 STK36Q9NRP7 1315 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 GSG1L2A8MUP6 293 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 B4E1Z4 1266 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 ZBTB22O15209 634 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 ZBTB43O43298 467 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 NR1I2O75469 434 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 RPS6KA4O75676 772 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 RCAN1P53805 252 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.41
LINC00649-202ENST00000400353 CAVIN4Q5BKX8 364 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 MFSD6Q6ZSS7 791 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 IGDCC4Q8TDY8 1250 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 WASF1Q92558 559 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 ARMT1Q9H993 441 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 EPB41L4AQ9HCS5 686 aaPredicted RBP12.52□□□□□ -0.41
LINC00649-202ENST00000400353 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 RGS17Q9UGC6 210 aaPredicted RBP12.52□□□□□ -0.41
LINC00649-202ENST00000400353 NARFQ9UHQ1 456 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 DENND2AQ9ULE3 1009 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
LINC00649-202ENST00000400353 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 NEDD4P46934 1319 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
LINC00649-202ENST00000400353 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 OFD1O75665 1012 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 TDO2P48775 406 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 FAM160A1Q05DH4 1040 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 CAMK4Q16566 473 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 TMEM67Q5HYA8 995 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 CNPY4Q8N129 248 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.51□□□□□ -0.41
LINC00649-202ENST00000400353 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
LINC00649-202ENST00000400353 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 GOLGA8AA7E2F4 631 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 ONECUT3O60422 494 aaPredicted RBP12.5□□□□□ -0.41
LINC00649-202ENST00000400353 KINO60870 393 aaKnown RBP12.5□□□□□ -0.41
LINC00649-202ENST00000400353 IGSF3O75054 1194 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 GUCY1B3Q02153 619 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
LINC00649-202ENST00000400353 CYP7A1P22680 504 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 ME1P48163 572 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 STK38Q15208 465 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 CKAP2LQ8IYA6 745 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 MRPS27Q92552 414 aaKnown RBP12.5□□□□□ -0.41
LINC00649-202ENST00000400353 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 THSD7AQ9UPZ6 1657 aa12.5□□□□□ -0.41
LINC00649-202ENST00000400353 ERICH2A1L162 156 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 KIF23Q02241 960 aaPredicted RBP12.49□□□□□ -0.41
LINC00649-202ENST00000400353 CEBPZQ03701 1054 aaKnown RBP12.49□□□□□ -0.41
LINC00649-202ENST00000400353 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 TRIM29Q14134 588 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 SF3A1Q15459 793 aaKnown RBP12.49□□□□□ -0.41
LINC00649-202ENST00000400353 ANO6Q4KMQ2 910 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 FSIP1Q8NA03 581 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 LINC00301Q8NCQ3 95 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 TDRD7Q8NHU6 1098 aaKnown RBP12.49□□□□□ -0.41
LINC00649-202ENST00000400353 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 ANAPC4Q9UJX5 808 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 SLC12A7Q9Y666 1083 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 CHD4Q14839 1912 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms